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* gnu: Add guile-config.•••* gnu/packages/guile.scm (guile-config): New variable. Alex Sassmannshausen2016-02-161-0/+28
* gnu: qrencode: Update to 3.4.4.•••* gnu/packages/aidc.scm (qrencode): Update to 3.4.4. Efraim Flashner2016-02-161-6/+8
* gnu: pari-gp: Build documentation.•••* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Add texlive-minimal. [arguments]: Modify make-flags to build documentation. Andreas Enge2016-02-161-1/+3
* gnu: Add texlive-minimal.•••* gnu/packages/texlive.scm (texlive-texmf-minimal, texlive-minimal): New variables. Andreas Enge2016-02-161-1/+75
* gnu: hydrogen: Update to 0.9.6.1.•••* gnu/packages/music.scm (hydrogen): Update to 0.9.6.1. [build-system]: Switch to cmake-build-system. [arguments]: Enable configure and tests, remove custom phases. [native-inputs]: Remove python-2, scons. Add cppunit. [inputs]: Add libarchive, lrdf. Efraim Flashner2016-02-161-47/+17
* gnu: htseq: Add PySam to inputs.•••* gnu/packages/bioinformatics.scm (htseq)[inputs]: Add "python2-pysam". Ricardo Wurmus2016-02-161-0/+2
* gnu: Add StringTie.•••* gnu/packages/bioinformatics.scm (stringtie): New variable. Ricardo Wurmus2016-02-161-0/+55
* gnu: Add Augeas.•••* gnu/packages/augeas.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it. Ricardo Wurmus2016-02-161-0/+59
* gnu: gpsbabel: Use 'modify-phases'.•••* gnu/packages/gps.scm (gpsbabel)[arguments]: Use 'modify-phases'. Efraim Flashner2016-02-161-6/+6
* gnu: gpsbabel: Update to 1.5.2.•••* gnu/packages/gps.scm (gpsbabel): Update to 1.5.2. [inputs]: Remove qt-4, add qt. Efraim Flashner2016-02-161-3/+4
* gnu: librecad: Use 'modify-phases'.•••* gnu/packages/engineering.scm (librecad)[arguments]: Use 'modify-phases'. Efraim Flashner2016-02-161-21/+17
* gnu: librecad: Update to 2.0.9.•••* gnu/packages/engineering.scm (librecad): Update to 2.0.9. [inputs]: Use qt instead of qt-4. Efraim Flashner2016-02-161-4/+5
* gnu: iftop: Fix license.•••* gnu/packages/admin.scm (iftop)[license]: Correct 'gpl3' to 'gpl2+'. Leo Famulari2016-02-151-1/+1
* gnu: shntool: Fix license.•••* gnu/packages/audio.scm (shntool)[license]: Correct 'gpl3+' to 'gpl2+' and add 'x11'. Leo Famulari2016-02-151-1/+2
* gnu: pioneers: Fix license.•••* gnu/packages/games.scm (pioneers)[license]: Correct 'gpl3+' to 'gpl2+'. Leo Famulari2016-02-151-1/+1
* gnu: Add pioneers.•••* gnu/packages/games.scm (pioneers): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Rodger Fox2016-02-151-0/+26
* gnu: vdirsyncer: Update to 0.9.0.•••* gnu/packages/dav.scm (vdirsyncer): Update to 0.9.0. Leo Famulari2016-02-151-2/+2
* gnu: python-click-log: Update to 0.1.3.•••* gnu/packages/python.scm (python-click-log): Update to 0.1.3. Leo Famulari2016-02-151-2/+2
* gnu: python-atomicwrites: Update to 0.1.9.•••* gnu/packages/python.scm (python-atomicwrites): Update to 0.1.9. Leo Famulari2016-02-151-2/+2
* gnu: python-lxml: Update to 3.5.0.•••* gnu/packages/python.scm (python-lxml, python2-lxml): Update to 3.5.0. [source]: Use pypi-uri. Leo Famulari2016-02-151-6/+3
* gnu: redshift: Update to 1.11.•••* gnu/packages/xdisorg.scm (redshift): Update to 1.11. Tobias Geerinckx-Rice2016-02-151-2/+2
* gnu: python-sqlalchemy: Update to 1.0.12.•••* gnu/packages/python.scm (python-sqlalchemy): Update to 1.0.12. Christopher Allan Webber2016-02-151-2/+2
* gnu: Add slurm.•••* gnu/packages/parallel.scm (slurm): New variable. * gnu/packages/patches/slurm-configure-remove-nonfree-contribs.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/parallel.scm: Introduce license name space. Co-authored-by: Andreas Enge <andreas@enge.fr> Pjotr Prins2016-02-152-6/+123
* gnu: prodigal: Update to 2.6.3.•••* gnu/packages/bioinformatics.scm (prodigal): Update to 2.6.3. Ben Woodcroft2016-02-161-2/+2
* gnu: polkit-qt: Build with qt-5.•••*gnu/packages/polkit.scm (polkit-qt)[propagated-inputs]: Use qt. Efraim Flashner2016-02-151-3/+4
* gnu: bazaar: Update to 2.7.0.•••* gnu/packages/version-control.scm (bazaar): Update to 2.7.0. Efraim Flashner2016-02-151-3/+5
* gnu: r-annotationdbi: Update to 1.32.3.•••* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.32.3. Ricardo Wurmus2016-02-151-2/+2
* gnu: Add audit.•••* gnu/packages/admin.scm (audit): New variable. Ricardo Wurmus2016-02-151-0/+40
* gnu: vera: Update to 1.23.•••* gnu/packages/dictionaries.scm (vera): Update to 1.23. Efraim Flashner2016-02-151-2/+3
* gnu: nano: Update to 2.5.2.•••* gnu/packages/nano.scm (nano): Update to 2.5.2. Efraim Flashner2016-02-151-2/+2
* gnu: bitcoin-core: Update to 0.11.2.•••* gnu/packages/finance.scm (bitcoin-core): Update to 0.11.2. [native-inputs]: Use python-2 instead of python-wrapper. Efraim Flashner2016-02-151-3/+4
* gnu: owncloud-client: Update to 2.1.1.•••* gnu/packages/owncloud.scm (owncloud-client): Update to 2.1.1. Efraim Flashner2016-02-151-3/+3
* gnu: vsearch: Update to 1.10.0.•••* gnu/packages/bioinformatics.scm (vsearch): Update to 1.10.0. [origin]: Adapt to changes in bundling of cityhash. Ben Woodcroft2016-02-151-8/+19
* gnu: cityhash: Install citycrc.h.•••* gnu/packages/textutils.scm (cityhash)[arguments]: Install citycrc.h. [version]: Use standardised format, increment to 1.1-2. Ben Woodcroft2016-02-151-10/+21
* gnu: graphite2: Update to 1.3.5. Update home-page and source URI.•••* gnu/packages/fontutils.scm (graphite2): Update to 1.3.5. [source, home-page]: Update to reflect upstream move to github. Mark H Weaver2016-02-151-6/+7
* gnu: libsndfile: Update to 1.0.26 [with follow-up fix CVE-2015-7805].•••Note: The previous fix for CVE-2015-7805 was incomplete. * gnu/packages/patches/libsndfile-CVE-2014-9496.patch, gnu/packages/patches/libsndfile-CVE-2015-7805.patch: Delete files. * gnu-system.am (dist_patch_DATA): Remove them. * gnu/packages/pulseaudio.scm (libsndfile): Update to 1.0.26. [source]: Remove patches. Mark H Weaver2016-02-153-156/+3
* gnu: libgcrypt: Update to 1.6.5 [fixes CVE-2015-7511].•••* gnu/packages/gnupg.scm (libgcrypt): Update to 1.6.5. Christopher Allan Webber2016-02-151-2/+2
* gnu: btrfs-progs: Fix license.•••Reported by Tobias Geerinckx-Rice <tobias.geerinckx.rice@gmail.com> * gnu/packages/linux.scm (btrfs-progs)[license]: Add GPL2 to list of licenses. Leo Famulari2016-02-141-1/+3
* gnu: font-terminus: Update to 4.40•••* gnu/packages/fonts.scm (font-terminus): Update to 4.40. Signed-off-by: Leo Famulari <leo@famulari.name> Nils Gillmann2016-02-141-3/+4
* gnu: python-ly: Update to 0.9.3.•••* gnu/packages/python.scm (python-ly): Update to 0.9.3. Andreas Enge2016-02-141-2/+2
* gnu: lxqt: Update source URLs to use HTTPS.•••* gnu/packages/lxqt.scm (libqtxdg, liblxqt, lxqt-common) (lxqt-session)[source]: Use HTTPS URLs. Mark H Weaver2016-02-141-4/+5
* gnu: openbox: Update to 3.6.1.•••* gnu/packages/openbox.scm (openbox): Update to 3.6.1. Efraim Flashner2016-02-141-3/+4
* gnu: postgresql: Update to 9.3.11. [fixes CVE-2015-{5288,5289},CVE-2016-{0766...•••* gnu/packages/databases.scm (postgresql): Update to 9.3.11. Efraim Flashner2016-02-141-2/+2
* gnu: Add baobab.•••* gnu/packages/gnome.scm (baobab): New variable. Jochem Raat2016-02-131-0/+33
* gnu: Add pianobar.•••* gnu/packages/music.scm (pianobar): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Al McElrath2016-02-131-0/+38
* gnu: Add python-wtforms•••* gnu/packages/python.scm (python-wtforms, python2-wtforms): New variables. Christopher Allan Webber2016-02-131-0/+29
* gnu: iproute: Update to 4.4.0.•••* gnu/packages/linux.scm (iproute): Update to 4.4.0. Alex Kost2016-02-131-8/+8
* gnu: iproute: Use 'modify-phases'.•••* gnu/packages/linux.scm (iproute)[arguments]: Use 'modify-phases'. Alex Kost2016-02-131-7/+7
* gnu: calibre: Update to 2.51.0.•••* gnu/packages/ebook.scm (calibre): Update to 2.51.0. Andreas Enge2016-02-131-2/+2
* gnu: gnuplot: Update to 5.0.2.•••* gnu/packages/maths.scm (gnuplot): Update to 5.0.2. Andreas Enge2016-02-131-2/+2
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