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* gnu: Kodi: Add Wayland variant.•••* gnu/packages/kodi.scm (kodi/wayland): New public variable. Marius Bakke2019-03-141-1/+19
* gnu: Add waylandpp.•••* gnu/packages/freedesktop.scm (waylandpp): New public variable. Marius Bakke2019-03-141-1/+29
* gnu: Add emacs-lsp-ui.•••* gnu/packages/emacs-xyz.scm (emacs-lsp-ui): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Brett Gilio2019-03-141-0/+27
* gnu: Add emacs-lsp-mode.•••* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Brett Gilio2019-03-141-0/+27
* gnu: emacs-dash: Update to 2.15.0.•••* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.15.0. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Brett Gilio2019-03-141-2/+2
* gnu: Update dtc to 1.5.0.•••* gnu/packages/bootloaders (dtc): Update to 1.5.0. [native-inputs]: Add libyaml and pkg-config. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Vagrant Cascadian2019-03-141-2/+4
* gnu: fish: Update to 3.0.2.•••* gnu/packages/shells.scm (fish): Update to 3.0.2. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Meiyo Peng2019-03-141-2/+2
* gnu: Add r-rematch2.•••* gnu/packages/cran.scm (r-rematch2): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Nicolò Balzarotti2019-03-141-0/+22
* gnu: w3m: Update to 0.5.3+git20190105.•••* gnu/packages/w3m.scm (w3m): Update to 0.5.3+git20190105. Leo Famulari2019-03-131-2/+2
* linux-container: 'containerized-operating-system' removes "useless" services.•••Fixes <https://bugs.gnu.org/34211>. Reported by Efraim Flashner <efraim@flashner.co.il>. * gnu/system/linux-container.scm (containerized-operating-system) [useless-services]: New variable. Add 'services' field. Ludovic Courtès2019-03-131-1/+13
* installer: network: Adjust wording.•••* gnu/installer/newt/network.scm (wait-service-online): Adjust wording of the messages. Ludovic Courtès2019-03-131-3/+3
* linux-modules: Factorize 'missing-modules'.•••* gnu/build/linux-modules.scm (missing-modules): New procedure. * gnu/system/mapped-devices.scm (check-device-initrd-modules): Use it. Ludovic Courtès2019-03-132-35/+47
* Remove traces of "GuixSD".•••* gnu/bootloader/extlinux.scm (extlinux-configuration-file): Remove mentions of "GuixSD". * gnu/bootloader/grub.scm (install-grub-efi): Likewise. * gnu/build/vm.scm (make-iso9660-image): Change default #:volume-id to "Guix_image". (initialize-hard-disk): Search for the "Guix_image" label. * gnu/ci.scm (system-test-jobs, tarball-jobs): Remove "GuixSD". * gnu/installer/newt/welcome.scm (run-welcome-page): Likewise. * gnu/packages/audio.scm (supercollider)[description]: Likewise. * gnu/packages/curl.scm (curl): Likewise. * gnu/packages/emacs.scm (emacs): Likewise. * gnu/packages/gnome.scm (network-manager): Likewise. * gnu/packages/julia.scm (julia): Likewise. * gnu/packages/linux.scm (alsa-plugins): Likewise. (powertop, wireless-regdb): Likewise. * gnu/packages/package-management.scm (guix): Likewise. * gnu/packages/polkit.scm (polkit): Likewise. * gnu/packages/tex.scm (texlive-bin): Likewise. * gnu/services/base.scm (file-systems->fstab): Likewise. * gnu/services/cups.scm (%cups-activation): Likewise. * gnu/services/mail.scm (%dovecot-activation): Likewise. * gnu/services/messaging.scm (prosody-configuration)[log]: Likewise. * gnu/system/examples/vm-image.tmpl (vm-image-motd): Likewise. * gnu/system/install.scm (installation-os)[file-systems]: Change root file system label to "Guix_image". * gnu/system/mapped-devices.scm (check-device-initrd-modules): Remove "GuixSD". * gnu/system/vm.scm (system-docker-image): Likewise. (system-disk-image)[root-label]: Change to "Guix_image". * gnu/tests/install.scm (run-install): Remove "GuixSD". * guix/modules.scm (guix-module-name?): Likewise. * nix/libstore/optimise-store.cc: Likewise. Ludovic Courtès2019-03-1324-39/+39
* gnu: Add python-velocyto.•••* gnu/packages/bioinformatics.scm (python-velocyto): New variable. Ricardo Wurmus2019-03-131-0/+31
* gnu: python-loompy: Update to 2.0.17.•••* gnu/packages/bioinformatics.scm (python-loompy): Update to 2.0.17. [source]: Fetch via git. [arguments]: Enable tests, replace "check" phase. [propagated-inputs]: Add python-pandas. [native-inputs]: Add python-pytest. Ricardo Wurmus2019-03-131-10/+24
* gnu: Add emacs-dockerfile-mode.•••* gnu/packages/emacs-xyz.scm (emacs-dockerfile-mode): New variable. Oleg Pykhalov2019-03-131-0/+26
* gnu: Add emacs-docker.•••* gnu/packages/emacs-xyz.scm (emacs-docker): New variable. Oleg Pykhalov2019-03-131-0/+32
* gnu: Add emacs-docker-tramp.•••* gnu/packages/emacs-xyz.scm (emacs-docker-tramp): New variable. Oleg Pykhalov2019-03-131-0/+21
* gnu: python-numba: Update to 0.42.0.•••* gnu/packages/python-xyz.scm (python-numba): Update to 0.42.0. Ricardo Wurmus2019-03-131-2/+2
* gnu: python-llvmlite: Update to 0.27.1.•••* gnu/packages/llvm.scm (python-llvmlite): Update to 0.27.1. [inputs]: Update patch for custom LLVM variant. Ricardo Wurmus2019-03-131-4/+4
* gnu: Add python-on-guile.•••* gnu/packages/guile-xyz.scm (python-on-guile): New variable. Ricardo Wurmus2019-03-131-0/+47
* gnu: guile-persist: Install go files to canonical directory.•••* gnu/packages/guile-xyz.scm (guile-persist)[arguments]: Patch target directory for go files in build phase "patch-prefix". Ricardo Wurmus2019-03-131-1/+3
* gnu: guile-stis-parser: Install go files to canonical directory.•••* gnu/packages/guile-xyz.scm (guile-stis-parser)[arguments]: Add build phase "use-canonical-directory-for-go-files". Ricardo Wurmus2019-03-131-0/+5
* gnu: Add kaldi.•••* gnu/packages/machine-learning.scm (kaldi): New variable. Ricardo Wurmus2019-03-131-0/+103
* gnu: Add r-valr.•••* gnu/packages/cran.scm (r-valr): New variable. Ricardo Wurmus2019-03-131-0/+29
* gnu: Add r-linnorm.•••* gnu/packages/bioconductor.scm (r-linnorm): New variable. Ricardo Wurmus2019-03-131-0/+59
* gnu: Add python2-argparse.•••* gnu/packages/python-xyz.scm (python2-argparse): New variable. Ricardo Wurmus2019-03-131-0/+21
* gnu: Add r-apcluster.•••* gnu/packages/cran.scm (r-apcluster): New variable. Ricardo Wurmus2019-03-131-0/+25
* gnu: Add r-gmodels.•••* gnu/packages/cran.scm (r-gmodels): New variable. Ricardo Wurmus2019-03-131-0/+21
* gnu: Add tetoolkit.•••* gnu/packages/bioinformatics.scm (tetoolkit): New variable. Ricardo Wurmus2019-03-131-0/+66
* gnu: Add r-irkernel.•••* gnu/packages/cran.scm (r-irkernel): New variable. Ricardo Wurmus2019-03-131-0/+45
* gnu: Add r-irdisplay.•••* gnu/packages/cran.scm (r-irdisplay): New variable. Ricardo Wurmus2019-03-131-0/+23
* gnu: Add r-repr.•••* gnu/packages/cran.scm (r-repr): New variable. Ricardo Wurmus2019-03-131-0/+23
* gnu: Add r-pbdzmq.•••* gnu/packages/cran.scm (r-pbdzmq): New variable. Ricardo Wurmus2019-03-131-0/+29
* gnu: Add r-illuminahumanmethylationepicmanifest.•••* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest): New variable. Ricardo Wurmus2019-03-131-0/+26
* gnu: Add r-lumi.•••* gnu/packages/bioconductor.scm (r-lumi): New variable. Ricardo Wurmus2019-03-131-0/+39
* gnu: Add r-methylumi.•••* gnu/packages/bioconductor.scm (r-methylumi): New variable. Ricardo Wurmus2019-03-131-0/+44
* gnu: Add r-fdb-infiniummethylation-hg19.•••* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19): New variable. Ricardo Wurmus2019-03-131-0/+32
* gnu: portaudio: Build position independent code and install more headers.•••* gnu/packages/audio.scm (portaudio)[arguments]: Pass "--with-pic" and initialize libtool in new build phase "build-only-position-independent-code"; install extra header in new build phase "install-missing-headers". Ricardo Wurmus2019-03-131-1/+20
* gnu: Add r-minfi.•••* gnu/packages/bioconductor.scm (r-minfi): New variable. Ricardo Wurmus2019-03-131-0/+49
* gnu: Add r-bumphunter.•••* gnu/packages/bioconductor.scm (r-bumphunter): New variable. Ricardo Wurmus2019-03-131-0/+34
* gnu: Add r-siggenes.•••* gnu/packages/bioconductor.scm (r-siggenes): New variable. Ricardo Wurmus2019-03-131-0/+25
* gnu: Add r-illuminaio.•••* gnu/packages/bioconductor.scm (r-illuminaio): New variable. Ricardo Wurmus2019-03-131-0/+21
* gnu: Add r-geoquery.•••* gnu/packages/bioconductor.scm (r-geoquery): New variable. Ricardo Wurmus2019-03-131-0/+31
* gnu: Add r-scone.•••* gnu/packages/bioconductor.scm (r-scone): New variable. Ricardo Wurmus2019-03-131-0/+40
* gnu: Add r-scdd.•••* gnu/packages/bioconductor.scm (r-scdd): New variable. Ricardo Wurmus2019-03-131-0/+36
* gnu: Add r-noiseq.•••* gnu/packages/bioconductor.scm (r-noiseq): New variable. Ricardo Wurmus2019-03-131-0/+27
* gnu: Add r-monocle.•••* gnu/packages/bioconductor.scm (r-monocle): New variable. Ricardo Wurmus2019-03-131-0/+55
* gnu: Add r-mast.•••* gnu/packages/bioconductor.scm (r-mast): New variable. Ricardo Wurmus2019-03-131-0/+33
* gnu: Add r-icobra.•••* gnu/packages/bioconductor.scm (r-icobra): New variable. Ricardo Wurmus2019-03-131-0/+34