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* gnu: 389-ds-base: Use more global directories.•••* gnu/packages/openldap.scm (389-ds-base)[arguments]: Pass "with-instconfigdir"; add phase "overwrite-default-locations" to overwrite defaults for "initconfig_dir", the certificate location, and the location of the defaults file. Ricardo Wurmus2019-03-201-0/+20
* gnu: 389-ds-base: Fix tool references.•••* gnu/packages/openldap.scm (389-ds-base)[arguments]: Rename phase "fix-includes" to "fix-references" and fix references to certutil and c_rehash. [inputs]: Add nss:bin. Ricardo Wurmus2019-03-201-1/+7
* gnu: Add adapterremoval.•••* gnu/packages/bioinformatics.scm (adapterremoval): New variable. Ricardo Wurmus2019-03-201-0/+37
* gnu: 389-ds-base: Set localstatedir to /var.•••* gnu/packages/openldap.scm (389-ds-base)[arguments]: Set localstatedir to /var. Ricardo Wurmus2019-03-201-0/+1
* gnu: 389-ds-base: Update to 1.4.0.21.•••* gnu/packages/openldap.scm (389-ds-base): Update to 1.4.0.21. [arguments]: Add phase "fix-includes". [inputs]: Add cracklib. Ricardo Wurmus2019-03-201-3/+10
* gnu: emacs-helm-notmuch: Update to 1.2.•••* gnu/packages/emacs-xyz.scm (emacs-helm-notmuch): Update to 1.2. Pierre Neidhardt2019-03-201-22/+21
* gnu: libinfinity: Update to 0.7.1.•••* gnu/packages/gobby.scm (libinfinity): Update to 0.7.1. [inputs]: Remove gtk+-2. Add gtk+. Arun Isaac2019-03-201-4/+4
* gnu: icecat: Update to 60.6.0-guix1 [security-fixes].•••Includes fixes for CVE-2018-18506, CVE-2019-9788, CVE-2019-9790, CVE-2019-9791, CVE-2019-9792, CVE-2019-9793, CVE-2019-9794, CVE-2019-9795, CVE-2019-9796, and CVE-2019-9801. * gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.6.0-guix1. (icecat-source)[upstream-firefox-source]: Update hash. Mark H Weaver2019-03-191-2/+2
* gnu: icecat: Improve computed 'icecat-source' tarball.•••* gnu/packages/gnuzilla.scm (icecat-source): When packing the new IceCat tarball, set the mtime of archived files to early 1980. Remove useless 'string-append' applied to one argument. Mark H Weaver2019-03-191-3/+7
* gnu: knot: Update to 2.8.0.•••* gnu/packages/dns.scm (knot): Update to 2.8.0. [source]: Add patch. * gnu/packages/patches/knot-include-system-lmdb-header.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice2019-03-203-2/+39
* gnu: cataclysm-dda: Update to 0.D.•••* gnu/packages/games.scm (cataclysm-dda): Update to 0.D. nee2019-03-191-6/+3
* gnu: gandi.cli: Update to 1.4.•••* gnu/packages/networking.scm (gandi.cli): Update to 1.4. Tobias Geerinckx-Rice2019-03-191-2/+2
* gnu: python-ipy: Update to 1.00.•••* gnu/packages/networking.scm (python-ipy): Update to 1.00. Tobias Geerinckx-Rice2019-03-191-2/+2
* gnu: google-brotli: Update to 1.0.7.•••* gnu/packages/compression.scm (google-brotli): Update to 1.0.7. Tobias Geerinckx-Rice2019-03-191-2/+2
* gnu: google-brotli: Don't use unstable tarball.•••* gnu/packages/compression.scm (google-brotli)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice2019-03-191-7/+9
* gnu: perl-catalyst-plugin-session: Update to 0.41.•••* gnu/packages/web.scm (perl-catalyst-plugin-session): Update to 0.41. Tobias Geerinckx-Rice2019-03-191-3/+2
* gnu: perl-catalyst-action-rest: Update to 1.21.•••* gnu/packages/web.scm (perl-catalyst-action-rest): Update to 1.21. Tobias Geerinckx-Rice2019-03-191-2/+2
* gnu: perl-apache-logformat-compiler: Update to 0.35.•••* gnu/packages/web.scm (perl-apache-logformat-compiler): Update to 0.35. [native-inputs]: Replace perl-module-build with perl-module-build-tiny. Tobias Geerinckx-Rice2019-03-191-5/+4
* gnu: geomyidae: Update to 0.34.•••* gnu/packages/web.scm (geomyidae): Update to 0.34. Tobias Geerinckx-Rice2019-03-191-2/+2
* gnu: geomyidae: Update home page.•••* gnu/packages/web.scm (geomyidae)[home-page]: Point to relevant Web content. Tobias Geerinckx-Rice2019-03-191-1/+1
* gnu: geomyidae: Don't use unstable tarball.•••* gnu/packages/web.scm (geomyidae)[source]: Use GIT-FETCH and GIT-FILE-NAME. Tobias Geerinckx-Rice2019-03-191-6/+7
* gnu: youtube-dl: Update to 2019.03.18.•••* gnu/packages/video.scm (youtube-dl): Update to 2019.03.18. Tobias Geerinckx-Rice2019-03-191-2/+2
* gnu: dcmtk: Support more.•••* gnu/packages/image-processing.scm (dcmtk)[inputs]: Add libxml2, and openssl. Tobias Geerinckx-Rice2019-03-191-1/+6
* gnu: dcmtk: Update to 3.6.4.•••* gnu/packages/image-processing.scm (dcmtk): Update to 3.6.4. [inputs]: Add libjpeg. Order alphabetically. Move doxygen… [native-inputs]: …here. Remove perl. Order alphabetically. Tobias Geerinckx-Rice2019-03-191-17/+15
* gnu: dcmtk: Use HTTPS home page.•••* gnu/packages/image-processing.scm (dcmtk)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2019-03-191-1/+1
* gnu: Add emacs-helm-wikipedia.•••* gnu/packages/emacs-xyz.scm (emacs-helm-wikipedia): New variable. Pierre Neidhardt2019-03-191-0/+25
* gnu: emacs-evil-collection: Update to 20190319.•••* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 20190319. Pierre Neidhardt2019-03-191-3/+3
* gnu: scanmem: Enable GUI frontend.•••* gnu/packages/debug.scm (scanmem): Enable GUI frontend. [arguments]: Add "--enable-gui" configure flag and 'hardcode-python, 'wrap-gameconqueror phases. [native-inputs]: Add python-wrapper, gobject-introspection, gtk+. [propogated-inputs]: Add python-pygobject. Rutger Helling2019-03-191-1/+28
* gnu: nanopolish: Use python-wrapper.•••* gnu/packages/bioinformatics.scm (nanopolish)[inputs]: Replace "python" with "python-wrapper" as scripts require "python" executable. Ricardo Wurmus2019-03-191-1/+1
* gnu: nanopolish: Remove bundled library sources.•••* gnu/packages/bioinformatics.scm (nanopolish)[source]: Add snippet to remove bundled htslib sources. Ricardo Wurmus2019-03-191-1/+6
* gnu: hyperledger-fabric: Use git tag.•••* gnu/packages/hyperledger.scm (hyperledger-fabric)[source]: Check out the (supposedly immutable) tag instead of the (maintenance) branch. Tobias Geerinckx-Rice2019-03-191-3/+5
* gnu: Add emacs-org-re-reveal.•••* gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): New variable. Clément Lassieur2019-03-191-0/+25
* gnu: emacs-org-reveal: Update to 1cdd088.•••* gnu/packages/emacs-xyz.scm (emacs-org-reveal): Update to 1cdd088. Clément Lassieur2019-03-191-3/+3
* gnu: emacs-org-reveal: Use git-version and git-file-name.•••* gnu/packages/emacs-xyz.scm (emacs-org-reveal)[version]: Use git-version. [source]: Use git-file-name. Clément Lassieur2019-03-191-20/+19
* gnu: Add edgar.•••* gnu/packages/games.scm (edgar): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> nee2019-03-191-1/+48
* gnu: coq-flocq: remove unnecessary return values•••* gnu/packages/coq.scm (coq-flocq)[arguments]: Add unnecessary return values after 'invoke' calls. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Dan Frumin2019-03-191-6/+3
* gnu: Add python-flint.•••* gnu/packages/algebra.scm (python-flint): New variable. * gnu/packages/patches/python-flint-includes.patch: New file. * gnu/local.mk (dist_patch_DATA): Register the patch. Andreas Enge2019-03-193-0/+166
* gnu: Add rtv.•••* gnu/packages/syndication.scm (rtv): New variable. Efraim Flashner2019-03-191-1/+50
* gnu: Add python-vcrpy.•••* gnu/packages/python-check.scm (python-vcrpy): New variable. Efraim Flashner2019-03-191-0/+48
* gnu: MPD: Update to 0.21.6.•••* gnu/packages/mpd.scm (mpd): Update to 0.21.6. Leo Famulari2019-03-181-2/+2
* gnu: autorandr: Fix typo in synopsis.•••* gnu/packages/xdisorg.scm (autorandr)[synopsis]: Fix typo. Tobias Geerinckx-Rice2019-03-181-1/+1
* gnu: python-biom-format: Fix build.•••* gnu/packages/bioinformatics.scm (python-biom-format)[source]: Remove generated C files. [arguments]: Disable second broken test. Ricardo Wurmus2019-03-181-2/+12
* gnu: python-pyarrow: Update to 0.10.0.•••* gnu/packages/databases.scm (python-pyarrow): Update to 0.10.0. [arguments]: Delete "build" phase. [native-inputs]: Add python-pytest-runner. Ricardo Wurmus2019-03-181-5/+6
* gnu: apache-arrow: Update to 0.10.0.•••* gnu/packages/databases.scm (apache-arrow): Update to 0.10.0. [inputs]: Replace jemalloc-4.5.0 with jemalloc. Ricardo Wurmus2019-03-181-7/+5
* gnu: dav1d: Update to 0.2.1.•••* gnu/packages/video.scm (dav1d): Update to 0.2.1. Tobias Geerinckx-Rice2019-03-181-3/+2
* gnu: st: Update to 0.8.2.•••* gnu/packages/suckless.scm (st): Update to 0.8.2. [arguments]: Re-indent. Tobias Geerinckx-Rice2019-03-181-8/+7
* gnu: darktable: Update to 2.6.1.•••* gnu/packages/photo.scm (darktable): Update to 2.6.1. Tobias Geerinckx-Rice2019-03-181-12/+11
* gnu: cracklib: Update to 2.9.7.•••* gnu/packages/password-utils.scm (cracklib): Update to 2.9.7. [source]: Remove patches. * gnu/packages/patches/cracklib-CVE-2016-6318.patch, gnu/packages/patches/cracklib-fix-buffer-overflow.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove them. Tobias Geerinckx-Rice2019-03-184-148/+10
* gnu: speedtest-cli: Update to 2.1.1.•••* gnu/packages/networking.scm (speedtest-cli): Update to 2.1.1. Tobias Geerinckx-Rice2019-03-181-3/+2
* gnu: ntp: Update to 4.2.8p13.•••* gnu/packages/ntp.scm (ntp): Update to 4.2.8p13. Tobias Geerinckx-Rice2019-03-181-4/+3
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