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* gnu: diffoscope: Update to 143.•••* gnu/packages/diffoscope (diffoscope): Update to 143. [native-inputs]: Add openssl and python-h5py. [arguments] Add openssl to add-known-tools phase. [arguments] Remove hdf5 from add-known-tools phase, added upstream. Vagrant Cascadian2020-04-301-4/+7
* gnu: MPD: Update to 0.21.23.•••* gnu/packages/mpd.scm (mpd): Update to 0.21.23. Leo Famulari2020-04-301-2/+2
* gnu: libntlm: Update to 1.6 [fixes CVE-2019-17455].•••* gnu/packages/gsasl.scm (libntlm): Update to 1.6. Signed-off-by: Leo Famulari <leo@famulari.name> Simon Josefsson2020-04-301-2/+2
* gnu: sbcl-osicat: Fix library path.•••* gnu/packages/lisp-xyz.scm (sbcl-osicat)[arguments]: Replace 'cleanup phase to preserve the location of libosicat.so so that it can be found when loading the system. Pierre Neidhardt2020-04-301-13/+11
* gnu: r-vgam: Update to 1.1-3.•••* gnu/packages/statistics.scm (r-vgam): Update to 1.1-3. [inputs]: Move gfortran from here... [native-inputs]: ...to here. Ricardo Wurmus2020-04-301-3/+3
* gnu: r-rcpparmadillo: Update to 0.9.870.2.0.•••* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.870.2.0. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-spatial: Update to 7.3-12.•••* gnu/packages/statistics.scm (r-spatial): Update to 7.3-12. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-nnet: Update to 7.3-14.•••* gnu/packages/statistics.scm (r-nnet): Update to 7.3-14. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-kernsmooth: Update to 2.23-17.•••* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-17. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-foreign: Update to 0.8-79.•••* gnu/packages/statistics.scm (r-foreign): Update to 0.8-79. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-class: Update to 7.3-17.•••* gnu/packages/statistics.scm (r-class): Update to 7.3-17. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-mass: Update to 7.3-51.6.•••* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.6. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-boot: Update to 1.3-25.•••* gnu/packages/statistics.scm (r-boot): Update to 1.3-25. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-kutils: Update to 1.70.•••* gnu/packages/cran.scm (r-kutils): Update to 1.70. [propagated-inputs]: Remove r-lavaan. Ricardo Wurmus2020-04-301-3/+2
* gnu: r-univoutl: Update to 0.2.•••* gnu/packages/cran.scm (r-univoutl): Update to 0.2. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-graphlayouts: Update to 0.7.0.•••* gnu/packages/cran.scm (r-graphlayouts): Update to 0.7.0. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-systemfonts: Update to 0.2.1.•••* gnu/packages/cran.scm (r-systemfonts): Update to 0.2.1. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-ggfortify: Update to 0.4.10.•••* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.10. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-dalex: Update to 1.2.1.•••* gnu/packages/cran.scm (r-dalex): Update to 1.2.1. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-arm: Update to 1.11-1.•••* gnu/packages/cran.scm (r-arm): Update to 1.11-1. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-usethis: Update to 1.6.1.•••* gnu/packages/cran.scm (r-usethis): Update to 1.6.1. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-rootsolve: Update to 1.8.2.1.•••* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.1. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-proxy: Update to 0.4-24.•••* gnu/packages/cran.scm (r-proxy): Update to 0.4-24. Ricardo Wurmus2020-04-301-2/+2
* gnu: r-pkgbuild: Update to 1.0.7.•••* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.7. Ricardo Wurmus2020-04-301-2/+2
* gnu: Add miniasm.•••* gnu/packages/bioinformatics.scm (miniasm): New variable. Roel Janssen2020-04-301-0/+36
* gnu: Add one more missing module import.•••This is a follow-up to commit 61fc72d3ac949d0c65690ee25bb1daf01f39bb42. * gnu/packages/backup.scm: Add missing import of (gnu packages protobuf). Ricardo Wurmus2020-04-301-0/+1
* gnu: Add missing module import.•••This is a follow-up to commit 61fc72d3ac949d0c65690ee25bb1daf01f39bb42. * gnu/packages/backup.scm: Add missing import of (guix build-system cmake). Ricardo Wurmus2020-04-301-1/+2
* gnu: Add zbackup.•••* gnu/packages/backup.scm (zbackup): New variable. Nicolas Goaziou2020-04-301-0/+37
* gnu: python2-pysnptools: Update to 0.4.11.•••* gnu/packages/python-xyz.scm (python2-pysnptools): Update to 0.4.11; implement in terms of... (python-pysnptools): ...this new variable. [propagated-inputs]: Add python-dill, python-h5py, and python-psutil. Ricardo Wurmus2020-04-301-10/+24
* gnu: kaldi-gstreamer-server: Fix bug.•••* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[arguments]: Patch master_server.py before build. Ricardo Wurmus2020-04-301-0/+4
* gnu: kaldi-gstreamer-server: Use Tornado 6.•••* gnu/packages/machine-learning.scm (kaldi-gstreamer-server)[inputs]: Replace python-tornado with python-tornado-6. Ricardo Wurmus2020-04-301-1/+1
* gnu: Add python-tornado-6.•••* gnu/packages/python-web.scm (python-tornado-6): New variable. Ricardo Wurmus2020-04-301-0/+31
* gnu: python2-warpedlmm: Fix build.•••* gnu/packages/bioinformatics.scm (python2-warpedlmm)[propagated-inputs]: Add python2-weave. [arguments]: Disable tests and add "use-weave" phase. Ricardo Wurmus2020-04-301-2/+12
* gnu: Add python2-weave.•••* gnu/packages/python-science.scm (python2-weave): New variable. Ricardo Wurmus2020-04-301-1/+34
* gnu: Add r-rserve.•••* gnu/packages/cran.scm (r-rserve): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Eric Brown2020-04-301-0/+37
* gnu: gnuradio: Fix runtime python environment for plugins.•••* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add PYTHONPATH. [native-inputs]: Move python ... [inputs]: ... here. Guillaume Le Vaillant2020-04-301-2/+10
* gnu: linux-libre: Update to 5.4.36.•••* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.36. (linux-libre-5.4-pristine-source): Update hash. Mark H Weaver2020-04-291-2/+2
* gnu: linux-libre@5.6: Update to 5.6.8.•••* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.8. (linux-libre-5.6-pristine-source): Update hash. Mark H Weaver2020-04-291-2/+2
* gnu: linux-libre@4.19: Update to 4.19.119.•••* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.119. (linux-libre-4.19-pristine-source): Update hash. Mark H Weaver2020-04-291-2/+2
* gnu: python-hacking: Update to 1.1.0.•••* gnu/packages/openstack.scm (python-hacking): Update to 1.1.0. [arguments]: Add "delete-broken-test" phase. [propagated-inputs]: Replace python-flake8-2.5 with python-flake8-2.6. Ricardo Wurmus2020-04-301-3/+14
* gnu: python-flake8-2.5: Update to 2.6.2.•••* gnu/packages/python-xyz.scm (python-flake8-2.5): Update to 2.6.2; rename it... (python-flake8-2.6): ...to this. [arguments]: Add phase "use-later-pycodestyles", and move "check" phase after "install". [propagated-inputs]: Explicitly list python-pycodestyle, python-entrypoints, python-pyflakes-1.2, and python-mccabe. Ricardo Wurmus2020-04-301-5/+24
* gnu: Remove python2-flake8-2.5.•••* gnu/packages/python-xyz.scm (python2-flake8-2.5): Remove variable. (python-flake8-2.5)[properties]: Remove. Ricardo Wurmus2020-04-301-12/+1
* gnu: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2.•••* gnu/packages/python-xyz.scm (python-pyflakes-0.8.1): Remove variable. (python-pyflakes-1.2): New variable. * gnu/packages/openstack.scm (python-hacking)[propagated-inputs]: Replace python-pyflakes-0.8.1 with python-pyflakes-1.2. Ricardo Wurmus2020-04-302-17/+22
* gnu: Remove python2-pyflakes-0.8.1.•••* gnu/packages/python-xyz.scm (python2-pyflakes-0.8.1): Remove variable. Ricardo Wurmus2020-04-301-3/+0
* gnu: Add python-cmd2.•••* gnu/packages/python-xyz.scm (python-cmd2): New variable. Ricardo Wurmus2020-04-301-0/+46
* gnu: Add python-voluptuous.•••* gnu/packages/python-xyz.scm (python-voluptuous): New variable. Ricardo Wurmus2020-04-301-0/+21
* gnu: python-psutil: Update to 5.7.0.•••* gnu/packages/python-xyz.scm (python-psutil): Update to 5.7.0. Ricardo Wurmus2020-04-301-3/+4
* gnu: Add sbcl-stumpwm-pass.•••* gnu/packages/wm.scm (sbcl-stumpwm-pass): New variable. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com> Marcin Karpezo2020-04-301-0/+31
* gnu: Magic Wormhole: Update to 0.12.0.•••* gnu/packages/magic-wormhole.scm (magic-wormhole): Update to 0.12.0. Leo Famulari2020-04-291-2/+2
* gnu: magic-wormhole-transit-relay: Update to 0.2.1.•••* gnu/packages/magic-wormhole.scm (magic-wormhole-transit-relay): Update to 0.2.1. Leo Famulari2020-04-291-2/+2
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