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* gnu: r-motifstack: Fix reference.•••* gnu/packages/bioconductor.scm (r-motifstack)[arguments]: Use correct label for reference to origin. Change-Id: Ia9b3222f15c9630bd703713111e79937126e20fd Ricardo Wurmus11 days1-1/+1
* gnu: r-reportingtools: Fix reference.•••* gnu/packages/bioconductor.scm (r-reportingtools)[arguments]: Use correct label for reference to origin. Change-Id: Id3b509c369bd35e12fff2fb2f4822bef4152aff1 Ricardo Wurmus11 days1-2/+2
* gnu: r-radiant-data: Fix reference.•••* gnu/packages/cran.scm (r-radiant-data)[arguments]: Use correct label for reference to origin. Change-Id: I5486e99fcca41f4d6968f4f95009159ffc66c05b Ricardo Wurmus11 days1-1/+1
* gnu: python-django-haystack: Enable tests.•••* gnu/packages/django.scm (python-django-haystack): Use G-Expressions. [arguments] <phases>: Use custom 'check. Remove 'set-gdal-lib-path having it makes all tests to fail. [inputs]: Remove gdal. Change-Id: Ic7b70f731cd805b2aedfc94fe9a13cb37c7ff930 Sharlatan Hellseher11 days1-10/+6
* gnu: python-geopy: Update to 2.4.1.•••* gnu/packages/geo.scm (python-geopy): Update to 2.4.1. [build-system]: Swap to pyproject-build-system. [arguments] <test-flags>: Skip tests requiring Internet. [native-inputs]: Remove python-async-generator, python-coverage, python-flake8, python-isort, python-pytest-aiohttp, and python-readme-renderer; add python-docutils, python-pytest-asyncio, python-setuptools, and python-wheel. Change-Id: I051f6b9a98e6adb0e72dd3e57a73ee66c5df4b86 Sharlatan Hellseher11 days1-11/+12
* gnu: python-geographiclib: Update to 2.0.•••* gnu/packages/geo.scm (python-geographiclib): Update to 2.0. [build-system]: Swap to pyproject-build-system. [native-inputs]: Add python-pytest, python-setuptools, and python-wheel. Change-Id: I066cecab0a6934a5f18867b248b97d7a193c1d36 Sharlatan Hellseher11 days1-4/+8
* gnu: python-pandas-vet: Update to 2023.8.2.•••* gnu/packages/python-check.scm (python-pandas-vet): Update to 2023.8.2. [arguments]: Add phase 'set-version. [native-inputs]: Add python-hatchling and python-pytest-cov. Change-Id: I2b6352ba70b8862a1103983a0574ab4d635942ab Ricardo Wurmus11 days1-4/+22
* gnu: python-bigfloat: Fix build.•••* gnu/packages/python-xyz.scm (python-bigfloat)[source]: Add snippet to delete generated file. [build-system]: Use pyproject-build-system. [arguments]: Disable one test; add phase 'cythonize. [native-inputs]: Add python-cython, python-pytest, python-setuptools, and python-wheel. Change-Id: If535051bbe7f223feb2a04b0b044a631c906f213 Ricardo Wurmus11 days1-4/+16
* gnu: python-ipfsspec: Add missing inputs.•••* gnu/packages/python-xyz.scm (python-ipfsspec)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I763c22207f1b1bb5af5eb5667a060ab01757c864 Ricardo Wurmus11 days1-1/+5
* gnu: python-contexttimer: Add missing inputs.•••* gnu/packages/python-xyz.scm (python-contexttimer)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I1d6e1efe869624c1da47332c8a000f88b458c193 Ricardo Wurmus11 days1-1/+1
* gnu: python-psycopg: Update to 3.2.4.•••* gnu/packages/databases.scm (python-psycopg): Update to 3.2.4. [build-system]: Use pyproject-build-system. [arguments]: Simplify phases; restore 'sanity-check. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Iec2949c7e01e0dff2893181c3a49e8e3a3319446 Ricardo Wurmus11 days1-48/+37
* gnu: python-sphinx-5: Disable one failing test.•••* gnu/packages/sphinx.scm (python-sphinx-5)[arguments]: Disable one test. Change-Id: I97e5d4df511e11ac1335baaf99df839d5e58ed18 Ricardo Wurmus11 days1-0/+3
* gnu: python-apiron: Add missing inputs.•••* gnu/packages/python-web.scm (python-apiron)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I98c35266870e2b2a9fa59f933350592cd0269721 Ricardo Wurmus11 days1-1/+2
* gnu: Move python-pysnptools to (gnu packages bioinformatics).•••* gnu/packages/python-xyz.scm (python-pysnptools): Move from here... * gnu/packages/bioinformatics.scm (python-pysnptools): ...to here. Change-Id: I4dbd9cbe3f2d9a6dd4906be79b78862b39a57c28 Ricardo Wurmus11 days2-42/+42
* gnu: python-pysnptools: Update to 0.5.14.•••* gnu/packages/python-xyz.scm (python-pysnptools): Update to 0.5.14. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. [propagated-inputs]: Remove python-dill; add python-bed-reader, python-cloudpickle, and python-more-itertools. [native-inputs]: Remove python-cython; add python-pytest, python-pytest-cov, python-pytest-datadir, python-pytest-doctestplus, python-setuptools, python-sphinx, python-sphinx-rtd-theme, and python-wheel. Change-Id: I685f819e70ab209198b504c6e41b253dc5a1d876 Ricardo Wurmus11 days1-16/+17
* gnu: Add python-bed-reader.•••* gnu/packages/bioinformatics.scm (python-bed-reader): New variable. Change-Id: Iad3f1d1c05abe706d8cd52a4d046247a5a9738e2 Ricardo Wurmus11 days1-0/+120
* gnu: Add rust-numpy-0.22.•••* gnu/packages/crates-io.scm (rust-numpy-0.22): New variable. Change-Id: Iba01905cb4284671771c195f8777e4c8179683b2 Ricardo Wurmus11 days1-0/+30
* gnu: Add rust-rusoto-credential-0.48.•••* gnu/packages/crates-web.scm (rust-rusoto-credential-0.48): New variable. Change-Id: I22ff3f5a1b27bbbd3ca9204e26b9c6dadd440c53 Ricardo Wurmus11 days1-0/+30
* gnu: Add rust-ndarray-rand-0.15.•••* gnu/packages/crates-io.scm (rust-ndarray-rand-0.15): New variable. Change-Id: I67863ccb0fdb7b74b40985a8162a2cfb6f236def Ricardo Wurmus11 days1-0/+25
* gnu: Add rust-ndarray-npy-0.9.•••* gnu/packages/crates-io.scm (rust-ndarray-npy-0.9): New variable. Change-Id: I69bb42218e09a32250e8feeee0d6ca8e0a1a9845 Ricardo Wurmus11 days1-0/+28
* gnu: Add rust-object-store-0.11.•••* gnu/packages/crates-io.scm (rust-object-store-0.11): New variable. Change-Id: If6009cfde48eeffde5bc4055c943c4fe8a6ff797 Ricardo Wurmus11 days1-0/+47
* gnu: Add rust-statrs-0.17.•••* gnu/packages/crates-io.scm (rust-statrs-0.17): New variable. Change-Id: I3c7ea9f6ecb2d635e62f5e655d9291064ff4b25a Ricardo Wurmus11 days1-0/+24
* gnu: Add rust-py-literal-0.4.•••* gnu/packages/crates-io.scm (rust-py-literal-0.4): New variable. Change-Id: Ie5b845a642bf862f062d3160e856969da9b21f3a Ricardo Wurmus11 days1-0/+24
* gnu: Add rust-fetch-data-0.2.•••* gnu/packages/crates-io.scm (rust-fetch-data-0.2): New variable. Change-Id: Ie323074ac7bbe648b17a08ae13305d7bad466879 Ricardo Wurmus11 days1-0/+31
* gnu: Add rust-dpc-pariter-0.4.•••* gnu/packages/crates-io.scm (rust-dpc-pariter-0.4): New variable. Change-Id: I6e6f278e62f3b68ce7211fb01cc109bbf5db42f1 Ricardo Wurmus11 days1-0/+22
* gnu: Add rust-cloud-file-0.2.•••* gnu/packages/crates-io.scm (rust-cloud-file-0.2): New variable. Change-Id: Ib41346daa3a225a88549c320c4f46600c6276526 Ricardo Wurmus11 days1-0/+28
* gnu: Add rust-anyinput-0.1.•••* gnu/packages/crates-io.scm (rust-anyinput-0.1): New variable. Change-Id: I5347d8bb51b18c6de5026d0e598fdbdea360a15d Ricardo Wurmus11 days1-0/+22
* gnu: Add rust-anyinput-derive-0.1.•••* gnu/packages/crates-io.scm (rust-anyinput-derive-0.1): New variable. Change-Id: If0e113e1822fb110ea8b11019d87aad899da90c3 Ricardo Wurmus11 days1-0/+23
* gnu: Add rust-anyinput-core-0.1.•••* gnu/packages/crates-io.scm (rust-anyinput-core-0.1): New variable. Change-Id: I158924de285938697ad286a44936a93ecb440f4a Ricardo Wurmus11 days1-0/+26
* gnu: Add rust-ndarray-0.16.•••* gnu/packages/crates-io.scm (rust-ndarray-0.16): New variable. Change-Id: Idce1bf031c473b803d8c6e3b9cc7505277cad91c Ricardo Wurmus11 days1-0/+35
* gnu: wllvm: Add missing inputs.•••* gnu/packages/llvm.scm (wllvm)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I080f132763607f7bc5f4609c993bd2a067cd9be4 Ricardo Wurmus11 days1-1/+2
* gnu: python-more-itertools: Update to 10.6.0.•••* gnu/packages/python-xyz.scm (python-more-itertools-next): Rename this variable... (python-more-itertools): ...to this; update to 10.6.0. [propagated-inputs]: Remove python-six. * gnu/packages/astronomy.scm (python-yt)[propagated-inputs]: Replace python-more-itertools-next with python-more-itertools. Change-Id: I2fef91f87afde2b2659dd25b831fb13b4c118454 Ricardo Wurmus11 days2-30/+10
* gnu: python-incremental: Update to 24.7.2.•••* gnu/packages/python-xyz.scm (python-incremental): Update to 24.7.2. [build-system]: Use pyproject-build-system. [arguments]: Add phase 'patch-build-system; disable tests. [native-inputs]: Add python-pytest, python-setuptools, and python-wheel. [propagated-inputs]: Add python-tomli. Change-Id: I6c49f2da746398d469f6fdc611fc08cfbe72a0e1 Ricardo Wurmus11 days1-3/+19
* gnu: python-gymnasium: Add missing input.•••* gnu/packages/machine-learning.scm (python-gymnasium)[native-inputs]: Add python-wheel. Change-Id: I118aa4283767906c59a6daa93d0ba01bfbfb6029 Ricardo Wurmus11 days1-4/+5
* gnu: Remove python-pytest-lazy-fixture.•••Failed to build, have no users in Guix, not maintained for 3 years. See <https://github.com/TvoroG/pytest-lazy-fixture/issues/63>. * gnu/packages/check.scm (python-pytest-lazy-fixture): Delete variable. Change-Id: Icce5010704f20a5530ff9fd702e5c0cc694cc0ec Sharlatan Hellseher11 days1-27/+0
* gnu: python-cleanlab: Update to 2.7.0.•••* gnu/packages/machine-learning.scm (python-cleanlab): Update to 2.7.0. [arguments] <test-flags>: Ignore tests requiring Hugging Face datasets. [native-inputs]: Remove python-pytest-lazy-fixture; add python-typing-extensions. Change-Id: I7988b4c0b6dff10a44d4a1fbffa48b950158302c Sharlatan Hellseher11 days1-6/+10
* gnu: python-scrapy: Update to 2.12.0.•••* gnu/packages/python-web.scm (python-scrapy): Update to 2.12.0. [arguments]: Update list of disabled tests. [propagated-inputs]: Remove python-botocore and python-setuptools; add python-packaging and python-typing-extensions. [native-inputs]: Add python-mypy and python-setuptools; remove python-pyftpdlib and python-uvloop. Change-Id: If747801ccbb6047b8d1a98714dafae8ab3743b07 Ricardo Wurmus11 days1-9/+13
* gnu: python-pplpy: Add missing inputs.•••* gnu/packages/sagemath.scm (python-pplpy)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I1da4130ddedeefbe71ae07c3885ae0e5fa1f8204 Ricardo Wurmus11 days1-1/+6
* gnu: python-internetarchive: Update to 5.1.0.•••* gnu/packages/web.scm (python-internetarchive): Update to 5.1.0. [source]: Remove snippet. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase; use test-flags. [propagated-inputs]: Add python-importlib-metadata and python-tqdm; update python-jsonpatch and python-schema. [native-inputs]: Add nss-certs-for-test, python-setuptools, and python-wheel. Change-Id: I8b5ea44e118ccb30b4e470957823a3f4dde89f43 Ricardo Wurmus11 days1-37/+24
* gnu: python-hdf4: Update to 0.9.2.•••* gnu/packages/python-xyz.scm (python-hdf4): Update to 0.9.2. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase; add phase 'build-extensions. [native-inputs]: Remove python-nose; add python-pytest, python-setuptools, and python-wheel. [inputs]: Drop labels. Change-Id: I96312f9509fae89a4c21a58b593ccb87952e0332 Ricardo Wurmus11 days1-14/+13
* gnu: python-maxminddb: Update to 2.6.3.•••* gnu/packages/geo.scm (python-maxminddb): Update to 2.6.3. [arguments] <tests?>: Enable them as no maxmind database is required. [native-inputs]: Add python-pytest, python-setuptools, and python-wheel. Change-Id: Ie4aaa559384c75942da83afdcca0a22a7c5ced1c Sharlatan Hellseher11 days1-5/+6
* gnu: python-fanc: Update to 0.9.28.•••* gnu/packages/bioinformatics.scm (python-fanc): Update to 0.9.28. [arguments]: Remove custom 'check phase; disable tests that seemingly freeze. [propagated-inputs]: Add python-imageio, python-pywavelets, and python-tifffile; remove python-pytest. [native-inputs]: Add python-pytest, python-setuptools, and python-wheel. Change-Id: Ia83f5fe1d0cbbf56840061feb9561e439380e965 Ricardo Wurmus11 days1-19/+14
* gnu: Deprecate fanc.•••fanc is a duplicate of python-fanc. * gnu/packages/bioinformatics.scm (fanc): Define as deprecated name for python-fanc. Change-Id: I28e330d9bfe64fd59b49001ecc56e2c6fd191b55 Ricardo Wurmus11 days1-58/+3
* gnu: python-nbstripout: Update to 0.8.1.•••* gnu/packages/jupyter.scm (python-nbstripout): Update to 0.8.1. [arguments]: Update test flags. [native-inputs]: Remove python-pytest-cram, python-pytest-flake8, and python-pytest-runner. Change-Id: I308ae787f7777ef11661ce8ef8802e13fa743509 Ricardo Wurmus11 days1-13/+8
* gnu: python-flask-misaka: Update to 1.0.1.•••* gnu/packages/python-web.scm (python-flask-misaka): Update to 1.0.1. [build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-flask, python-pytest, python-setuptools and python-wheel. Remove python-coverage and python-mock. [propagated-inputs]: Add python-markupsafe. Remove python-flask. Change-Id: Ib737e6268f98227909606753ffe8d9f72c539f73 宋文武11 days1-5/+7
* gnu: python-flask-migrate: Update to 4.1.0.•••* gnu/packages/python-web.scm (python-flask-migrate): Update to 4.1.0. [build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-pytest, python-setuptools and python-wheel. Change-Id: I39742c22619c6c3fca51f954c0930c2ccf0d4577 宋文武11 days1-3/+5
* gnu: python-alembic: Use python-sqlalchemy-2.•••* gnu/packages/databases.scm (python-alembic)[propagated-inputs]: Replace python-sqlalchemy with python-sqlalchemy-2. Change-Id: I49ad961eac3bcba5eaee05083e5299f17a8fae33 宋文武11 days1-1/+1
* gnu: python-hsluv: Fix build.•••* gnu/packages/python-xyz.scm (python-hsluv)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I4dbed681c4f1a83b0300dc9611cdf89072591389 宋文武11 days1-0/+2
* gnu: python-gpxpy: Fix build.•••* gnu/packages/python-xyz.scm (python-gpxpy)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I89d4360ed6502c84580bface08dba850c5d9efe1 宋文武11 days1-0/+2
* gnu: python-glom: Update to 24.11.0.•••* gnu/packages/python-xyz.scm (python-glom): Update to 24.11.0. Change-Id: I37c849475cedd1ecd812f896553a9deeabb00c3d 宋文武11 days1-2/+2
generated by cgit v1.2.3 (git 2.47.1) at 2025-01-31 08:51:57 +0000