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* gnu: pspp: Update to 0.11.0.•••This fixes CVE-2017-10791, CVE-2017-10792. * gnu/packages/statistics.scm (pspp): Update to 0.11.0. Efraim Flashner2017-08-161-2/+2
* gnu: Add ghc-equivalence.•••* gnu/packages/haskell.scm (ghc-equivalence): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Alex Vong2017-08-161-0/+29
* gnu: Add ghc-boxes.•••* gnu/packages/haskell.scm (ghc-boxes): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Alex Vong2017-08-161-0/+22
* gnu: Add ghc-edit-distance.•••* gnu/packages/haskell.scm (ghc-edit-distance): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Alex Vong2017-08-161-0/+25
* gnu: Add ghc-stmonadtrans.•••* gnu/packages/haskell.scm (ghc-stmonadtrans): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Alex Vong2017-08-161-0/+21
* gnu: Add ghc-strict.•••* gnu/packages/haskell.scm (ghc-strict): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Alex Vong2017-08-161-0/+20
* gnu: cpphs: Update to 1.20.8.•••* gnu/packages/haskell.scm (cpphs): Update to 1.20.8. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Alex Vong2017-08-161-2/+3
* gnu: font-google-noto: Use font-build-system.•••* gnu/packages/fonts.scm (font-google-noto)[build-system]: Use font-build-system. [source]: Use url-fetch/zipbomb. [arguments]: Remove it. [native-inputs]: Remove it. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> ng02017-08-161-24/+3
* gnu: r-mzr: Fix building on aarch64 and armhf.•••* gnu/packages/bioinformatics.scm (r-mzr)[inputs]: Add boost. Efraim Flashner2017-08-161-1/+2
* gnu: hdf4: Fix building on aarch64.•••* gnu/packages/maths.scm (hdf4)[arguments]: Add a phase to improve detection and support for aarch64-linux. Efraim Flashner2017-08-161-1/+10
* gnu: cgit: Don't build cgit's special 'git:src' input.•••This special version of Git is only used within the build process of cgit. We don't need to build it otherwise, so the package is removed with this commit. * gnu/packages/version-control.scm (cgit)[inputs]: Replace the git@2.10 package with an origin reference of the source code. (git@2.10): Remove variable. Leo Famulari2017-08-151-19/+15
* gnu: Fix memcached service startup.•••Memcached changes to the memcached user from root before writing the PID file. This means that it must be able to write the PID file as the memcached user. To make this work, create the /var/run/memcached directory when the service starts, make it owned by memcached, and change memcached to write the PID file to /var/run/memcached/pid. This wasn't picked up by the system test as the "service running" part was too permissive, and only failed on an error. Instead, test the response from calling start-service and check that the PID is a number. * gnu/services/databases.scm (memcached-activation): New variable. (memcached-shepherd-service): Change PID file location. (memcached-service-type): Extend the activation-service-type. * gnu/tests/databases.scm (run-memcached-test)[test]: Change the "service running" test to check the response from the shepherd. Christopher Baines2017-08-152-6/+21
* gnu: Add dssi.•••* gnu/packages/music.scm (dssi): New variable. Danny Milosavljevic2017-08-151-0/+34
* gnu: Add emacs-highlight-symbol.•••* gnu/packages/emacs.scm (emacs-highlight-symbol): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Oleg Pykhalov2017-08-151-0/+32
* gnu: fish-guix: Use new download URL.•••* gnu/packages/shells.scm (fish-guix)[source]: Adjust the download URL. Signed-off-by: Marius Bakke <mbakke@fastmail.com> ng02017-08-151-1/+1
* gnu: p11-kit: Update to 0.23.8.•••* gnu/packages/tls.scm (p11-kit): Update to 0.23.8. Marius Bakke2017-08-151-2/+2
* gnu: signify: Update to 22.•••* gnu/packages/crypto.scm (signify): Update to 22. Leo Famulari2017-08-151-2/+2
* gnu: diamond: Update to 0.9.10.•••* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.10. Ben Woodcroft2017-08-151-2/+2
* gnu: bcftools: Fix building on aarch64.•••* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: New file. * gnu/packages/bioinformatics.scm (bcftools)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner2017-08-153-0/+18
* Revert "gnu: pspp: Update to 0.11.0."•••This FTBFS on x86_64 and i686. This reverts commit f4c808df5b99bbe6d7a307c69ad27da5b17703d1. Efraim Flashner2017-08-151-2/+2
* gnu: youtube-dl: Update to 2017.08.13.•••* gnu/packages/video.scm (youtube-dl): Update to 2017.08.13. Tobias Geerinckx-Rice2017-08-151-2/+2
* gnu: e2fsprogs: Update to 1.43.5.•••* gnu/packages/patches/e2fsprogs-32bit-quota-warnings.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/linux.scm (e2fsprogs): Update to 1.43.5. [source]: Use patch. Marius Bakke2017-08-153-2/+50
* gnu: cvs: Fix CVE-2017-12836.•••* gnu/packages/patches/cvs-2017-12836.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/version-control.scm (cvs)[source]: Use it. Leo Famulari2017-08-143-0/+47
* gnu: git@2.10: Update to 2.10.4 [fixes CVE-2017-1000117].•••...also disable tests, since they broke after c9f4f56b24801718d89c2520b. * gnu/packages/version-control.scm (git@2.10): Update to 2.10.4. [arguments]: New field. Marius Bakke2017-08-141-9/+12
* gnu: gcc@7: Update to 7.2.0.•••* gnu/packages/gcc.scm (gcc@7): Update to 7.2.0. [source]: Switch to xz compression. Efraim Flashner2017-08-141-3/+3
* Revert "gnu: e2fsprogs: Update to 1.43.5."•••Fails to build on i686: <https://lists.gnu.org/archive/html/guix-devel/2017-08/msg00118.html> This reverts commit 3ddaa7922bdd71ff4467b95a7ed264bbc4d49975. Marius Bakke2017-08-141-2/+2
* gnu: milkytracker: Update to 1.01.00.•••* gnu/packages/music.scm (milkytracker): Update to 1.01.00. Kei Kebreau2017-08-141-3/+4
* gnu: Add bismark.•••* gnu/packages/bioinformatics.scm (bismark): New variable. Ricardo Wurmus2017-08-141-0/+63
* gnu: Add r-dexseq.•••* gnu/packages/bioinformatics.scm (r-dexseq): New variable. Ricardo Wurmus2017-08-141-0/+43
* gnu: Add perl-math-random-secure.•••* gnu/packages/crypto.scm (perl-math-random-secure): New variable. Ricardo Wurmus2017-08-141-0/+39
* gnu: Add perl-crypt-random-source.•••* gnu/packages/crypto.scm (perl-crypt-random-source): New variable. Ricardo Wurmus2017-08-141-0/+30
* gnu: Add perl-type-tiny.•••* gnu/packages/perl.scm (perl-type-tiny): New variable. Ricardo Wurmus2017-08-141-0/+34
* gnu: Add perl-ref-util-xs.•••* gnu/packages/perl.scm (perl-ref-util-xs): New variable. Ricardo Wurmus2017-08-141-0/+21
* gnu: Add perl-regexp-util.•••* gnu/packages/perl.scm (perl-regexp-util): New variable. Ricardo Wurmus2017-08-141-0/+21
* gnu: Add perl-type-tie.•••* gnu/packages/perl.scm (perl-type-tie): New variable. Ricardo Wurmus2017-08-141-0/+28
* gnu: Add perl-math-random-isaac.•••* gnu/packages/crypto.scm (perl-math-random-isaac): New variable. Ricardo Wurmus2017-08-141-0/+29
* gnu: Add perl-math-random-isaac-xs.•••* gnu/packages/crypto.scm (perl-math-random-isaac-xs): New variable. Ricardo Wurmus2017-08-141-1/+29
* gnu: Add perl-hash-fieldhash.•••* gnu/packages/perl.scm (perl-hash-fieldhash): New variable. Ricardo Wurmus2017-08-141-1/+25
* gnu: arandr: Use absolute path for xrandr.•••* gnu/packages/xdisorg.scm (arandr)[arguments]: Add configure phase. Arun Isaac2017-08-141-0/+8
* gnu: linux-libre: Update to 4.12.7.•••* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.7. (%linux-libre-hash): Update hash. Mark H Weaver2017-08-141-2/+2
* gnu: linux-libre@4.9: Update to 4.9.43.•••* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.43. Mark H Weaver2017-08-141-2/+2
* gnu: linux-libre@4.4: Update to 4.4.82.•••* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.82. Mark H Weaver2017-08-141-2/+2
* gnu: libreoffice: Install .desktop files.•••* gnu/packages/libreoffice.scm (libreoffice): Add phase to install .desktop files to $out/share so that LibreOffice will show up in Gnome/KDE/etc and so that it is associated with the various MIME types of interest. Andy Wingo2017-08-141-8/+43
* gnu: wxmaxima: Update to 17.05.1.•••* gnu/packages/maths.scm (wxmaxima): Update to 17.05.1. [arguments]: Put "autoconf" phase after the "unpack" phase. Fix indentation. Kei Kebreau2017-08-131-27/+26
* gnu: Update open-adventure to d43854f0f6bb8e9eea7fbce80348150e7e7fc34d.•••* gnu/packages/games.scm (open-adventure): Update to d43854f0f6bb8e9eea7fbce80348150e7e7fc34d. Signed-off-by: Kei Kebreau <kei@openmailbox.org> ng02017-08-131-9/+22
* gnu: linenoise: Update to commit 2105ce445821381cf1bca87b6d386d4ea88ee20d.•••* gnu/packages/shells.scm (linenoise): Update to commit 2105ce445821381cf1bca87b6d386d4ea88ee20d. Fix indentation. [source]: change to git. Signed-off-by: Kei Kebreau <kei@openmailbox.org> ng02017-08-131-33/+36
* gnu: qemu: Fix CVE-2017-{10664,10806,10911,11434}.•••* gnu/packages/patches/qemu-CVE-2017-10664.patch, gnu/packages/patches/qemu-CVE-2017-10806.patch, gnu/packages/patches/qemu-CVE-2017-10911.patch, gnu/packages/patches/qemu-CVE-2017-11434.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/virtualization.scm (qemu)[source]: Use them. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Alex Vong2017-08-136-1/+206
* gnu: curl: Fix i686 test failure.•••* gnu/packages/patches/curl-bounds-check.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/curl.scm (curl-7.55.0)[source]: Use it. Marius Bakke2017-08-133-0/+21
* gnu: imagemagick: Update to 6.9.9-7.•••* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-7. Marius Bakke2017-08-131-2/+2
* gnu: Add emacs-nix-mode.•••* gnu/packages/emacs.scm (emacs-nix-mode): New variable. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net> Oleg Pykhalov2017-08-131-0/+17