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* gnu: Add python-keyrings.alt.•••* gnu/packages/python-crypto.scm (python-keyring.alt): New variable. Efraim Flashner2020-03-221-0/+39
* gnu: edirect: Install more programs.•••* gnu/packages/bioinformatics.scm (edirect)[arguments]: Add 'patch-programs phase to work around not finding binaries in the PATH. Rewrite 'install phase to install many more scripts. Rewrite 'wrap-program to wrap more scripts with more programs. [inputs]: Add edirect-go-programs. [native-search-paths]: New field. Efraim Flashner2020-03-221-9/+46
* gnu: Add edirect-go-programs.•••* gnu/packages/bioinformatics.scm (edirect-go-programs): New variable. (edirect)[source]: Adjust snippet to not use non-free software. Efraim Flashner2020-03-221-3/+54
* gnu: Add go-github-com-surgebase-porter2.•••* gnu/packages/golang.scm (go-github-com-surgebase-porter2): New variable. Efraim Flashner2020-03-221-0/+30
* gnu: Add go-github-com-surge-glog.•••* gnu/packages/golang.scm (go-github-com-surge-glog): New variable. Efraim Flashner2020-03-221-0/+24
* gnu: Add go-github-com-pbnjay-memory.•••* gnu/packages/golang.scm (go-github-com-pbnjay-memory): New variable. Efraim Flashner2020-03-221-0/+26
* gnu: Add go-github-com-klauspost-cpuid.•••* gnu/packages/golang.scm (go-github-com-klauspost-cpuid): New variable. Efraim Flashner2020-03-221-0/+25
* gnu: Add go-github-com-gedex-inflector.•••* gnu/packages/golang.scm (go-github-com-gedex-inflector): New variable. Efraim Flashner2020-03-221-0/+24
* gnu: Add go-github-com-fogleman-gg.•••* gnu/packages/golang.scm (go-github-com-fogleman-gg): New variable. Efraim Flashner2020-03-221-0/+24
* gnu: Add go-github-com-golang-freetype.•••* gnu/packages/golang.scm (go-github-com-golang-freetype): New variable. Efraim Flashner2020-03-221-0/+27
* gnu: Add go-golang-org-rainycape-unidecode.•••* gnu/packages/golang.scm (go-golang-org-rainycape-unidecode): New variable. Efraim Flashner2020-03-221-0/+25
* gnu: Add go-golang-org-x-image.•••* gnu/packages/golang.scm (go-golang-org-x-image): New variable. Efraim Flashner2020-03-221-1/+31
* gnu: cutter: Update to 1.10.1.•••* gnu/packages/engineering.scm (cutter): Update to 1.10.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org> pinoaffe@airmail.cc2020-03-221-2/+2
* gnu: radare2: Update to 4.2.1.•••* gnu/packages/engineering.scm (radare2): Update to 4.2.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org> pinoaffe@airmail.cc2020-03-221-5/+7
* gnu: clipmenu: Improve the package definition•••* gnu/packages/xdisorg.scm (clipmenu): Add the package's unit-tests to the check phase. Wrap the program so the PATH contains all dependencies. The previous approach to patch the script was incomplete and more complex. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Damien Cassou2020-03-221-17/+35
* gnu: clipnotify: Comment on the lack of a test suite.•••* gnu/packages/xdisorg.scm (clipnotify): Add a comment Signed-off-by: Ludovic Courtès <ludo@gnu.org> Damien Cassou2020-03-221-0/+1
* gnu: clipmenu: Re-indent.•••* gnu/packages/xdisorg.scm (clipmenu): Re-indent Signed-off-by: Ludovic Courtès <ludo@gnu.org> Damien Cassou2020-03-221-53/+53
* gnu: Add dragonfly-reverb•••* gnu/packages/music.scm (dragonfly-reverb): New variable. Alexandros Theodotou2020-03-211-0/+52
* gnu: linux-libre: Update to 5.4.27.•••* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.27. (linux-libre-5.4-pristine-source): Update hash. Mark H Weaver2020-03-211-2/+2
* gnu: linux-libre@4.19: Update to 4.19.112.•••* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.112. (linux-libre-4.19-pristine-source): Update hash. Mark H Weaver2020-03-211-2/+2
* gnu: linux-libre@4.14: Update to 4.14.174.•••* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.174. (linux-libre-4.14-pristine-source): Update hash. Mark H Weaver2020-03-211-2/+2
* gnu: linux-libre@4.9: Update to 4.9.217.•••* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.217. (linux-libre-4.9-pristine-source): Update hash. Mark H Weaver2020-03-211-2/+2
* gnu: linux-libre@4.4: Update to 4.4.217.•••* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.217. (linux-libre-4.4-pristine-source): Update hash. Mark H Weaver2020-03-211-2/+2
* gnu: ghc-stylish-haskell: Deprecate older duplicate package.•••* gnu/packages/haskell-xyz.scm (ghc-stylish-haskell): Deprecate it. Signed-off-by: Marius Bakke <mbakke@fastmail.com> John Soo2020-03-211-62/+1
* gnu: stylish-haskell: Update description.•••* gnu/packages/haskell-apps.scm (stylish-haskell): Update description. Signed-off-by: Marius Bakke <mbakke@fastmail.com> John Soo2020-03-211-4/+22
* gnu: Add r-oai.•••* gnu/packages/cran.scm (r-oai): new variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Wiktor Żelazny2020-03-211-0/+26
* gnu: Add r-latex2exp.•••* gnu/packages/cran.scm (r-latex2exp): new variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Wiktor Żelazny2020-03-211-0/+21
* gnu: Add r-httpcode.•••* gnu/packages/cran.scm (r-httpcode): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Wiktor Żelazny2020-03-211-0/+19
* gnu: global: Add 'python-wrapper' as input.•••* gnu/packages/code.scm (global)[inputs]: Add 'python-wrapper' to fix tagging python code. wednesday2020-03-211-1/+2
* Revert "gnu: Remove qemu-minimal@2.10."•••This package was still in use by american-fuzzy-lop. This reverts commit 559f37328851fc1ae1d90f27fab7beff3d804421. Marius Bakke2020-03-211-0/+28
* gnu: gpgme: Fix build.•••Reported by joshuaBPMan on #guix. * gnu/packages/gnupg.scm (gpgme)[arguments]: Add ‘disable-failing-test’ phase. Tobias Geerinckx-Rice2020-03-211-0/+9
* gnu: python-pygraphviz: Use HTTPS home page.•••* gnu/packages/graphviz.scm (python-pygraphviz)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python-tables: Use HTTPS home page.•••* gnu/packages/python-xyz.scm (python-tables)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python-future: Use HTTPS home page.•••* gnu/packages/python-xyz.scm (python-future)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python-scrypt: Use HTTPS home page.•••* gnu/packages/python-crypto.scm (python-scrypt)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python-scikit-learn: Use HTTPS home page.•••* gnu/packages/machine-learning.scm (python-scikit-learn)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python2-pyro: Use HTTPS home page.•••* gnu/packages/python-xyz.scm (python2-pyro)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python2-element-tree: Use HTTPS home page.•••* gnu/packages/python-xyz.scm (python2-element-tree)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python-cheetah: Use HTTPS home page.•••* gnu/packages/python-xyz.scm (python-cheetah)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: python-kivy: Use HTTPS home page.•••* gnu/packages/python-xyz.scm (python-kivy)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2020-03-211-1/+1
* gnu: Add gnome-shell-extension-topicons-redux.•••* gnu/packages/gnome-xyz.scm (gnome-shell-extension-topicons-redux): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Ekaitz Zarraga2020-03-211-0/+42
* gnu: ghc-extra: Downgrade to 1.6.21.•••* gnu/packages/haskell-xyz.scm (ghc-extra): Downgrade to 1.6.21. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Alexandru-Sergiu Marton2020-03-211-2/+2
* gnu: Remove qemu-minimal@2.10.•••* gnu/packages/virtualization.scm (qemu-minimal-2.10): Remove variable. Marius Bakke2020-03-211-28/+0
* gnu: Remove flex@2.6.1.•••* gnu/packages/flex.scm (flex-2.6.1): Remove variable. Marius Bakke2020-03-211-13/+0
* gnu: GRUB: Use the latest version of QEMU for tests.•••* gnu/packages/bootloaders.scm (grub)[native-inputs]: Change from QEMU-MINIMAL-2.10 to QEMU-MINIMAL. Marius Bakke2020-03-211-1/+1
* gnu: GRUB: Build with the latest version of Flex.•••* gnu/packages/bootloaders.scm (grub)[native-inputs]: Change from FLEX-2.6.1 to FLEX. Marius Bakke2020-03-211-4/+1
* gnu: python-grpcio: Update to 1.27.2.•••* gnu/packages/rpc.scm (python-grpcio): Update to 1.27.2. [source](modules, snippet): New fields. [arguments]: Add phases to use system libraries and the correct compiler. [inputs]: Add C-ARES, OPENSSL, and ZLIB. Marius Bakke2020-03-211-2/+34
* gnu: TensorFlow: Correct gRPC input.•••* gnu/packages/machine-learning.scm (tensorflow)[native-inputs]: Move GRPC:STATIC ... [inputs]: ... here. Marius Bakke2020-03-211-1/+1
* gnu: gRPC: Update to 1.27.3.•••* gnu/packages/rpc.scm (grpc): Update to 1.27.3. [arguments]: Add "-DgRPC_ABSL_PROVIDER=package" in #:configure-flags. [inputs]: Add ABSEIL-CPP. (grpc-1.16.1): New public variable. * gnu/packages/hyperledger.scm (hyperledger-iroha)[inputs]: Change from GRPC to GRPC-1.16. * gnu/packages/machine-learning.scm (tensorflow)[native-inputs, inputs]: Likewise. Marius Bakke2020-03-213-6/+25
* gnu: python-gast: Update to 0.3.3.•••* gnu/packages/python-xyz.scm (python-gast): Update to 0.3.3. Marius Bakke2020-03-211-2/+2