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* gnu: bundler: Update to 1.13.2.•••* gnu/packages/ruby.scm (bundler): Update to 1.13.2. Ben Woodcroft2016-10-081-2/+2
* gnu: python-xlrd: Update to 1.0.0.•••* gnu/packages/python.scm (python-xlrd, python2-xlrd): Update to 1.0.0. Ben Woodcroft2016-10-081-3/+3
* gnu: ruby-mime-types-data: Update to 3.2016.0521.•••* gnu/packages/ruby.scm (ruby-mime-types-data): Update to 3.2016.0521. Ben Woodcroft2016-10-081-2/+2
* gnu: ruby-tzinfo-data: Update to 1.2016.7.•••* gnu/packages/ruby.scm (ruby-tzinfo-data): Update to 1.2016.7. Ben Woodcroft2016-10-081-2/+2
* gnu: ruby-domain-name: Update to 0.5.20160826.•••* gnu/packages/ruby.scm (ruby-domain-name): Update to 0.5.20160826. Ben Woodcroft2016-10-081-2/+2
* gnu: r-mgcv: Update to 1.8-15.•••* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-15. Ben Woodcroft2016-10-081-2/+2
* gnu: ruby-sequel: Update to 4.39.0.•••* gnu/packages/ruby.scm (ruby-sequel): Update to 4.39.0. Ben Woodcroft2016-10-081-2/+2
* gnu: yoshimi: Update to 1.4.1.•••* gnu/packages/music.scm (yoshimi): Update to 1.4.1. [arguments]: Add build phase "find-ncurses". Ricardo Wurmus2016-10-081-3/+13
* gnu: python2-dendropy: Fix tests.•••* gnu/packages/bioinformatics.scm (python2-dendropy)[source]: Use unpatched source. [arguments]: Use nose to run tests. [native-inputs]: Add python2-nose. Ben Woodcroft2016-10-081-0/+18
* gnu: vigra: Workaround rounding error in test suite on 32-bit CPUs.•••* gnu/packages/image.scm (vigra)[arguments]: Pass '-ffloat-store' to C_FLAGS and CXX_FLAGS. Leo Famulari2016-10-071-1/+4
* gnu: drumstick: Update to 1.1.0.•••* gnu/packages/music.scm (drumstick): Update to 1.1.0. Ricardo Wurmus2016-10-081-2/+2
* gnu: tbb: Update to 2017_20160916.•••* gnu/packages/tbb.scm (tbb): Update to 2017_20160916. Ricardo Wurmus2016-10-081-3/+3
* gnu: ncdu: Update to 1.12.•••* gnu/packages/ncdu.scm (ncdu): Update to 1.12. [source]: Use https. [license]: Use https. [home-page]: Use https. Efraim Flashner2016-10-071-5/+5
* gnu: abbaye: Update source URL.•••* gnu/packages/games.scm (abbaye)[source]: Update tarball URL. Ricardo Wurmus2016-10-071-2/+4
* gnu: khal: Update to 0.8.4.•••* gnu/packages/calendar.scm (khal): Update to 0.8.4. Leo Famulari2016-10-071-2/+2
* gnu: lvm2: Make sure compiled objects are stripped.•••* gnu/packages/linux.scm (lvm2)[arguments]: Add 'make-objects-writeable' phase. Leo Famulari2016-10-061-1/+11
* gnu: lvm2: Update to 2.02.166.•••* gnu/packages/linux.scm (lvm2): Update to 2.02.166. Leo Famulari2016-10-061-2/+2
* gnu: lvm2: Use 'modify-phases'.•••* gnu/packages/linux.scm (lvm2)[arguments]: Use 'modify-phases'. Leo Famulari2016-10-061-9/+10
* gnu: nginx: Update to 1.11.4.•••* gnu/packages/web.scm (nginx): Update to 1.11.4. [source] Use https. [home-page]: Use https. Efraim Flashner2016-10-061-5/+6
* gnu: Add hdf-eos5.•••* gnu/packages/maths.scm (hdf-eos5): New variable. * gnu/packages/patches/hdf-eos5-build-shared.patch: New file. * gnu/packages/patches/hdf-eos5-remove-gctp.patch: New file. * gnu/packages/patches/hdf-eos5-fix-szip.patch: New file. * gnu/packages/patches/hdf-eos5-fortrantests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-10-065-0/+309
* gnu: font-hack: Remove empty doc directory.•••* gnu/packages/fonts.scm (font-hack)[arguments]: Remove superfluous code in #:builder. Signed-off-by: 宋文武 <iyzsong@gmail.com> 8p8c2016-10-061-9/+2
* gnu: ecl: Honour XDG_DATA_DIRS/ecl-bundle-systems.•••* gnu/packages/lisp.scm (ecl)[source]: Add snippet. [native-search-paths]: Add XDG_DATA_DIRS. Signed-off-by: 宋文武 <iyzsong@gmail.com> Andy Patterson2016-10-061-1/+10
* gnu: sbcl: Honour XDG_DATA_DIRS/sbcl-bundle-systems.•••* gnu/packages/lisp.scm (asdf-substitutions): New variable. (sbcl)[source]: Add snippet. [native-search-paths]: Add XDG_DATA_DIRS. Signed-off-by: 宋文武 <iyzsong@gmail.com> Andy Patterson2016-10-061-1/+21
* gnu: Add ghc-pandoc-citeproc.•••* gnu/packages/haskell.scm (ghc-pandoc-citeproc): New variable. Ricardo Wurmus2016-10-061-0/+55
* gnu: Add ghc-xml-conduit.•••* gnu/packages/haskell.scm (ghc-xml-conduit): New variable. Ricardo Wurmus2016-10-061-0/+34
* gnu: Add ghc-xml-types.•••* gnu/packages/haskell.scm (ghc-xml-types): New variable. Ricardo Wurmus2016-10-061-0/+20
* gnu: Add ghc-conduit-extra.•••* gnu/packages/haskell.scm (ghc-conduit-extra): New variable. Ricardo Wurmus2016-10-061-0/+43
* gnu: Add ghc-rfc5051.•••* gnu/packages/haskell.scm (ghc-rfc5051): New variable. Ricardo Wurmus2016-10-061-0/+23
* gnu: Add ghc-hs-bibutils.•••* gnu/packages/haskell.scm (ghc-hs-bibutils): New variable. Ricardo Wurmus2016-10-061-0/+23
* gnu: ghc-streaming-commons: Remove standard packages from inputs.•••The "directory" and "transformers" modules are part of GHC and should not be among the inputs to avoid conflicts. * gnu/packages/haskell.scm (ghc-streaming-commons)[inputs]: Remove "ghc-directory" and "ghc-transformers". Ricardo Wurmus2016-10-061-2/+0
* gnu: Add r-bsgenome-celegans-ucsc-ce10.•••* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10): New variable. Ricardo Wurmus2016-10-061-0/+32
* gnu: nss-certs and nss: Update to 3.27.1.•••* gnu/packages/certs.scm (nss-certs): Update to 3.27.1. * gnu/packages/gnuzilla.scm (nss): Update to 3.27.1. Leo Famulari2016-10-052-4/+4
* gnu: e2fsprogs: Fix typo in comment.•••* gnu/packages/linux.scm (e2fsprogs)[arguments]: Fix typo in comment. Leo Famulari2016-10-051-1/+1
* gnu: e2fsprogs: Disable parallel build.•••* gnu/packages/linux.scm (e2fsprogs)[arguments]: Add #:parallel-build? #f. Leo Famulari2016-10-051-1/+5
* gnu: json-c: Update to 0.12.1.•••* gnu/packages/web.scm (json-c): Update to 0.12.1. Leo Famulari2016-10-051-2/+2
* gnu: libxvmc: Fix CVE-2016-7953.•••* gnu/packages/patches/libxvmc-CVE-2016-7953.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxvmc)[replacement]: New field. (libxvmc/fixed): New variable. Leo Famulari2016-10-052-0/+50
* gnu: libxv: Fix CVE-2016-5407.•••* gnu/packages/patches/libxv-CVE-2016-5407.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxv)[replacement]: New field. (libxv/fixed): New variable. Leo Famulari2016-10-052-0/+170
* gnu: libxtst: Fix CVE-2016-{7951,7952}.•••* gnu/packages/patches/libxtst-CVE-2016-7951-CVE-2016-7952.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxtst)[replacement]: New field. (libxtst/fixed): New variable. Leo Famulari2016-10-052-0/+160
* gnu: libxrender: Fix CVE-2016-{7949,7950}.•••* gnu/packages/patches/libxrender-CVE-2016-7949.patch, gnu/packages/patches/libxrender-CVE-2016-7950.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (libxrender)[replacement]: New field. (libxrender/fixed): New variable. Leo Famulari2016-10-053-0/+148
* gnu: libxrandr: Fix CVE-2016-{7947,7948}.•••* gnu/packages/patches/libxrandr-CVE-2016-7947-CVE-2016-7948.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxrandr)[replacement]: New field. (libxrandr/fixed): New variable. Leo Famulari2016-10-052-0/+455
* gnu: libxi: Fix CVE-2016-{7945,7946}.•••* gnu/packages/patches/libxi-CVE-2016-7945-CVE-2016-7946.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxi)[replacement]: New field. (libxi/fixed): New variable. Leo Famulari2016-10-052-0/+428
* gnu: libxfixes: Fix CVE-2016-7944.•••* gnu/packages/patches/libxfixes-CVE-2016-7944.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xorg.scm (libxfixes)[replacement]: New field. (libxfixes/fixed): New variable. Leo Famulari2016-10-052-0/+70
* gnu: libx11: Fix CVE-2016-{7942,7943}.•••* gnu/packages/patches/libx11-CVE-2016-7942.patch, gnu/packages/patches/libx11-CVE-2016-7943.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (libx11)[replacement]: New field. (libx11/fixed): New variable. Leo Famulari2016-10-053-0/+198
* gnu: Remove lispf4.•••The package in its current state is unusable and documentation with unclear licenses is included. Also, the file 'lispf42.c' (and possible others) is generated C code and thus not "source code" as we define it. * gnu/packages/lisp.scm (lispf4): Delete variable. Signed-off-by: Leo Famulari <leo@famulari.name> ng02016-10-051-44/+0
* gnu: btrfs-progs: Update to 4.8.•••* gnu/packages/linux.scm (btrfs-progs): Update to 4.8. Tobias Geerinckx-Rice2016-10-051-2/+2
* gnu: libass: Update to 0.13.4 [fixes CVE-2016-{7969,7970,7972}.•••* gnu/packages/video.scm (libass): Update to 0.13.4. Leo Famulari2016-10-051-2/+2
* gnu: gnucash: Update to 2.6.14.•••* gnu/packages/gnucash.scm (gnucash): Update to 2.6.14. Efraim Flashner2016-10-051-2/+2
* gnu: Add sunxi-tools.•••* gnu/packages/admin.scm (sunxi-tools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Danny Milosavljevic2016-10-051-0/+57
* gnu: Add Vc.•••* gnu/packages/maths.scm (vc): New variable. Leo Famulari2016-10-051-0/+34
* gnu: wordnet: Make sure the self-reference is visible to the GC.•••Before that, "guix gc --references $(guix build wordnet)" would not show WordNet itself, erroneously so. * gnu/packages/wordnet.scm (wordnet)[arguments]: Add -fno-builtin-strcpy to #:configure-flags. Ludovic Courtès2016-10-051-1/+16
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