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| * gnu: Add guile2.0-git.•••* gnu/packages/guile.scm (guile2.0-git): New variable. Ludovic Courtès2017-07-251-0/+3
| * gnu: Add guile2.0-bytestructures.•••* gnu/packages/patches/guile-bytestructures-name-clash.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/guile.scm (guile-bytestructures)[source]: Use it. [arguments]: Unpack the source. [native-inputs]: New field. (guile2.0-bytestructures): New variable. Ludovic Courtès2017-07-252-2/+51
| * gnu: maxima: Ensure binutils are available at runtime.•••* gnu/packages/maths.scm (maxima)[arguments]: Use modify-phases syntax. Modify 'post-install' phase. Kei Kebreau2017-07-251-30/+37
| * Revert "gnu: maxima: Ensure gcc is available at runtime."•••This reverts commit f2fa86cc82b5941bde63b666337eea59aa609e55. Commit 5ea8dbf0c906d51779ba0cf775ec9967f5f42382 fixes the underlying issue in GNU Common Lisp. Kei Kebreau2017-07-251-40/+31
| * gnu: gcl: Ensure gcc and binutils are available at runtime.•••* gnu/packages/lisp.scm (gcl)[arguments]: Add -fgnu89-inline to CFLAGS. Add GCC path to make-flags. Modify 'pre-conf' phase. Add 'wrap' phase. Kei Kebreau2017-07-251-0/+25
| * gnu: webkitgtk: Update to 2.16.6 [security fixes].•••Includes fixes for CVE-2017-7039, CVE-2017-7018, CVE-2017-7030, CVE-2017-7037, CVE-2017-7034, CVE-2017-7055, CVE-2017-7056, CVE-2017-7064, CVE-2017-7061, CVE-2017-7048, and CVE-2017-7046. * gnu/packages/webkit.scm (webkitgtk): Update to 2.16.6. Mark H Weaver2017-07-251-2/+2
| * gnu: xterm: Update to 330.•••* gnu/packages/xorg.scm (xterm): Update to 330. Leo Famulari2017-07-241-2/+2
| * gnu: dialog: Update to 1.3-20170509.•••* gnu/packages/ncurses.scm (dialog): Update to 1.3-20170509. Leo Famulari2017-07-241-2/+2
| * gnu: opus: Update to 1.2.1.•••* gnu/packages/xiph.scm (opus): Update to 1.2.1. [source]: Use new source URL. Leo Famulari2017-07-241-5/+4
| * gnu: gnome: Add deja-dup.•••* gnu/packages/gnome.scm (deja-dup): New variable. * gnu/packages/patches/deja-dup-use-ref-keyword-for-iter.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch file entry. Christopher Baines2017-07-242-0/+119
| * gnu: guix: Update snapshot.•••* gnu/packages/package-management.scm (guix): Update to f1ddfe4. Ludovic Courtès2017-07-241-3/+3
| * gnu: python-flaky: Fix Texinfo markup in description.•••* gnu/packages/python.scm (python-flaky)[description]: Escape "@". Ludovic Courtès2017-07-241-1/+1
* | gnu: perl-gd-securityimage: Fix build with Perl 5.26.0.•••* gnu/packages/gd.scm (perl-gd-securityimage)[arguments]: Set PERL_USE_UNSAFE_INC in new 'set-env' phase. Leo Famulari2017-07-271-0/+5
* | gnu: perl-feed-find: Fix build with Perl 5.26.0.•••* gnu/packages/web.scm (perl-feed-find)[arguments]: Set PERL_USE_UNSAFE_INC in new 'set-env' phase. Leo Famulari2017-07-271-1/+5
* | gnu: perl-encode-hanextra: Fix build with Perl 5.26.0.•••* gnu/packages/perl.scm (perl-encode-hanextra)[arguments]: Set PERL_USE_UNSAFE_INC in new 'set-env' phase. Leo Famulari2017-07-271-0/+5
* | gnu: po4a: Work around "dotless @INC" build issues.•••* gnu/packages/gettext.scm (po4a)[arguments]: Add build phase "set-search-path". Ricardo Wurmus2017-07-271-0/+7
* | gnu: synfig: Fix boost build error.•••* gnu/packages/animation.scm (synfig)[arguments]: Add phase "fix-boost-build-error". Ricardo Wurmus2017-07-261-0/+10
* | gnu: perl-anyevent: Update to 7.14.•••* gnu/packages/libevent.scm (perl-anyevent): Update to 7.14. Efraim Flashner2017-07-261-2/+2
* | gnu: perl-data-dumper-concise: Update to 2.023.•••* gnu/packages/perl.scm (perl-data-dumper-concise): Update to 2.023. [source]: Update source uri. Efraim Flashner2017-07-241-3/+3
* | gnu: perl-context-preserve: Update to 0.02.•••* gnu/packages/perl.scm (perl-context-preserve): Update to 0.02. Efraim Flashner2017-07-241-2/+2
* | gnu: python-pexpect: Add dependency on the full Bash.•••Fixes a regression introduced in 704243e0c6ec5ac86e2f45aaa469717e60b89124. * gnu/packages/python.scm (python-pexpect)[native-inputs]: Add BASH. Ludovic Courtès2017-07-241-1/+2
* | gnu: gnome-mime-data: Do not use the bundled intltool.•••* gnu/packages/gnome.scm (gnome-mime-data)[arguments]: New field. Ludovic Courtès2017-07-241-0/+11
* | gnu: perl: Work around "dotless @INC" build issues.•••* gnu/packages/perl.scm (perl-task-weaken)[arguments]: New field. (perl-unicode-normalize): Likewise. * gnu/packages/web.scm (perl-http-server-simple)[arguments]: Add #:phases. Ludovic Courtès2017-07-242-2/+29
* | gnu: perl-regexp-common: Update to 2017060201.•••* gnu/packages/perl.scm (perl-regexp-common): Update to 2017060201. Ludovic Courtès2017-07-241-2/+2
* | Merge branch 'master' into core-updatesLeo Famulari2017-07-2312-64/+148
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| * gnu: isc-dhcp: Update bundled bind to 9.9.10-P3.•••This fixes a regression introduced in the fix for CVE-2017-3142, in BIND 9.9.10-P2, commit ecb232bdfcb2718de5944bcf4d9c4e288ec41519. See 'CHANGELOG' in the source distribution for more information. * gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.10-P3. Leo Famulari2017-07-231-2/+2
| * gnu: bind: Update to 9.11.1-P3.•••This fixes a regression introduced in the fix for CVE-2017-3142, in BIND 9.11.1-P2, commit faa1369e3cb72bda4ba8b63029d0ad780df9cf78. See 'CHANGELOG' in the source distribution for more information. * gnu/packages/dns.scm (isc-bind): Update to 9.11.1-P3. Leo Famulari2017-07-231-2/+2
| * gnu: ncurses/gpm: Move to (gnu packages ncurses).•••This is needed to avoid compilation problems caused by the cyclic dependency between (gnu packages ncurses) and (gnu packages linux). * gnu/packages/linux.scm (ncurses/gpm): Move to ... * gnu/packages/ncurses.scm (ncurses/gpm): ... here. Fix misleading indentation. Add (gnu packages linux) to the module imports. Mark H Weaver2017-07-232-12/+14
| * gnu: Add support for aarch64's compiled kernel.•••* gnu/packages/linux.scm (linux-libre)[arguments]: Add to the regex to find and install the aarch64-linux kernel. * gnu/system.scm (system-linux-image-file-name): Add entry for aarch64. Efraim Flashner2017-07-231-1/+1
| * gnu: Add xf86-video-freedreno.•••* gnu/packages/xorg.scm (xf86-video-freedreno): New variable. Efraim Flashner2017-07-231-1/+48
| * gnu: Add u-boot-odroid-c2.•••* gnu/packages/bootloaders.scm (u-boot-odroid-c2): New variable. Efraim Flashner2017-07-231-0/+4
| * gnu: u-boot: Update to 2017.07.•••* gnu/packages/bootloaders.scm (u-boot): Update to 2017.07. Efraim Flashner2017-07-231-2/+2
| * gnu: tevent: Update to 0.9.33.•••* gnu/packages/samba.scm (tevent): Update to 0.9.33. Marius Bakke2017-07-231-2/+2
| * gnu: talloc: Update to 2.1.10.•••* gnu/packages/samba.scm (talloc): Update to 2.1.10. Marius Bakke2017-07-231-2/+2
| * gnu: ldb: Update to 1.1.31.•••* gnu/packages/samba.scm (ldb): Update to 1.1.31. [native-inputs]: Add CMOCKA. Marius Bakke2017-07-231-3/+6
| * gnu: cmocka: Update to 1.1.1.•••* gnu/packages/check.scm (cmocka): Update to 1.1.1. Marius Bakke2017-07-231-2/+2
| * gnu: tdb: Update to 1.3.14.•••* gnu/packages/databases.scm (tdb): Update to 1.3.14. Marius Bakke2017-07-231-2/+2
| * gnu: python-scipy: Update to 0.19.1.•••* gnu/packages/python.scm (python-scipy): Update to 0.19.1. [source]: Use 'pypi-uri'. Marius Bakke2017-07-231-5/+3
| * gnu: python-matplotlib: Update to 2.0.2.•••* gnu/packages/python.scm (python-matplotlib): Update to 2.0.2. [source]: Use 'pypi-uri'. Marius Bakke2017-07-231-5/+3
| * gnu: python-pyparsing: Update to 2.2.0.•••* gnu/packages/python.scm (python-pyparsing, python2-pyparsing): Update to 2.2.0. Marius Bakke2017-07-231-2/+2
| * gnu: python-pyparsing: Use 'modify-phases' syntax.•••* gnu/packages/python.scm (python-pyparsing)[arguments]<#:phases>: Use 'modify-phases'. Marius Bakke2017-07-231-19/+17
| * gnu: Add xmobar.•••gnu/packages/wm.scm (xmobar): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Oleg Pykhalov2017-07-231-0/+34
| * gnu: bash-completion: Update to 2.7.•••* gnu/packages/bash.scm (bash-completion): Update to 2.7. Efraim Flashner2017-07-231-2/+2
* | gnu: metabat: Fix boost-related compilation issue.•••Reported by Leo Famulari. * gnu/packages/patches/metabat-fix-boost-issue.patch: New file. * gnu/packages/bioinformatics.scm (metabat): Use it. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft2017-07-232-1/+29
* | Merge branch 'master' into core-updatesLeo Famulari2017-07-2390-802/+4214
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| * gnu: getmail: Update to 5.1.•••* gnu/packages/mail.scm (getmail): Update to 5.1. Signed-off-by: Leo Famulari <leo@famulari.name> ng02017-07-221-2/+2
| * gnu: metabat: Update to 2.11.1.•••* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.1. [source]: Add patch to fix compilation. [arguments]: Adjust regular expressions modifying 'SConstruct'. * gnu/packages/patches/metabat-fix-compilation.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft2017-07-232-46/+82
| * gnu: python-plastid: Update to 0.4.8.•••* gnu/packages/bioinformatics.scm (python-plastid): Update to 0.4.8. Ben Woodcroft2017-07-231-2/+2
| * gnu: bcftools: Update to 1.5.•••* gnu/packages/bioinformatics.scm (bcftools): Update to 1.5. [origin]: Remove fix-makefile patch. [arguments]: Add configure flags, add LIBS make flag. Do not delete configure phase. * gnu/packages/patches/bcftools-fix-makefile.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Ben Woodcroft2017-07-232-38/+5
| * gnu: samtools: Update to 1.5.•••* gnu/packages/bioinformatics.scm (samtools): Update to 1.5. Ben Woodcroft2017-07-231-2/+2