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* gnu: Add ribodiff.•••* gnu/packages/bioinformatics.scm (ribodiff): New variable. Ricardo Wurmus2017-01-171-0/+41
* gnu: Add hisat2.•••* gnu/packages/bioinformatics.scm (hisat2): New variable. Ricardo Wurmus2017-01-171-0/+63
* gnu: Add r-fivethirtyeight.•••* gnu/packages/statistics.scm (r-fivethirtyeight): New variable. Ricardo Wurmus2017-01-171-0/+27
* gnu: powertabeditor: Update to 2.0.0-alpha9.•••* gnu/packages/music.scm (powertabeditor): Update to 2.0.0-alpha9. [source]: Simplify snippet. [arguments]: Adjust phases; remove unnecessary configure flag. Ricardo Wurmus2017-01-171-47/+43
* Revert "gnu: cups-filters: Disable mutool integration."•••This change would cause 594 packages to be rebuilt, so it was moved to the staging branch. This reverts commit 58a7bbc5fe52f20910fb0fe7fddb9012f2049034. Leo Famulari2017-01-171-1/+1
* gnu: webkitgtk: Update to 2.14.3 [security fixes].•••Fixes CVE-2016-{7586,7589,7592,7599,7623,7632,7635,7639,7641,7645,7652,7654,7656}. * gnu/packages/webkit.scm (webkitgtk): Update to 2.14.3. Leo Famulari2017-01-171-2/+2
* gnu: cups-filters: Disable mutool integration.•••* gnu/packages/cups.scm (cups-filters)[arguments]: Add ‘--disable-mutool’ to #:configure-flags. [inputs]: Remove mupdf. Tobias Geerinckx-Rice2017-01-171-1/+1
* gnu: libpsl: Update to 0.17.0.•••* gnu/packages/web.scm (libpsl): Update to 0.17.0. Tobias Geerinckx-Rice2017-01-171-2/+2
* gnu: proxychains-ng: Update to 4.12.•••* gnu/packages/networking.scm (proxychains-ng): Update to 4.12. Tobias Geerinckx-Rice2017-01-171-3/+3
* gnu: password-store: Install bash completions.•••* gnu/packages/password-utils.scm (password-store)[arguments]: Add 'install-shell-completions' phase. Marius Bakke2017-01-171-1/+11
* gnu: gnucash: Update to 2.6.15.•••* gnu/packages/gnucash.scm (gnucash): Update to 2.6.15. Ricardo Wurmus2017-01-171-2/+2
* gnu: Add proj.4.•••* gnu/packages/geo.scm (proj.4): New variable. (gnome-maps): Use license: prefix. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Björn Höfling2017-01-171-2/+54
* gnu: xscreensaver: Update to 5.36.•••* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.36. Marius Bakke2017-01-171-2/+2
* gnu: perl-image-exiftool: Update to 10.40.•••* gnu/packages/photo.scm (perl-image-exiftool): Update to 10.40. [synopsis, description]: Mention more capabilities. Leo Famulari2017-01-171-6/+6
* gnu: ghc-quickcheck-instances: Update to 0.3.12.•••* gnu/packages/haskell.scm (ghc-quickcheck-instances): Update to 0.3.12. [inputs]: Add ghc-scientific and ghc-vector. Ricardo Wurmus2017-01-171-3/+5
* gnu: imagemagick: Update to 6.9.7-4 [security fixes].•••* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-4. Leo Famulari2017-01-161-2/+2
* gnu: Add scrypt.•••* gnu/packages/crypto.scm (scrypt): New variable. Leo Famulari2017-01-161-1/+37
* gnu: Add emacs-stripe-buffer.•••* gnu/packages/emacs.scm (emacs-stripe-buffer): New variable. Ricardo Wurmus2017-01-161-1/+22
* gnu: Add emacs-git-timemachine.•••* gnu/packages/emacs.scm (emacs-git-timemachine): New variable. Ricardo Wurmus2017-01-161-0/+20
* gnu: guile-sqlite3: Provide a new source URL.•••* gnu/packages/guile.scm (guile-sqlite3)[home-page]: Change. Ludovic Courtès2017-01-161-2/+4
* gnu: Add r-centipede.•••* gnu/packages/bioinformatics.scm (r-centipede): New variable. Ricardo Wurmus2017-01-161-0/+24
* gnu: Add ocaml-lwt.•••* gnu/packages/ocaml.scm (ocaml-lwt): New variable. Julien Lepiller2017-01-161-0/+49
* gnu: Add ocaml-ssl.•••* gnu/packages/ocaml.scm (ocaml-ssl): New variable. Julien Lepiller2017-01-161-0/+33
* gnu: Add ocaml-react.•••* gnu/packages/ocaml.scm (ocaml-react): New variable. Julien Lepiller2017-01-161-0/+26
* gnu: Add ocaml-ppx-tools.•••* gnu/packages/ocaml.scm (ocaml-ppx-tools): New variable. Julien Lepiller2017-01-161-0/+19
* gnu: Add ocaml-alcotest.•••* gnu/packages/ocaml.scm (ocaml-alcotest): New variable. Julien Lepiller2017-01-161-0/+31
* gnu: Add ocaml-astring.•••* gnu/packages/ocaml.scm (ocaml-astring): New variable. Julien Lepiller2017-01-161-0/+30
* gnu: Add ocaml-fmt.•••* gnu/packages/ocaml.scm (ocaml-fmt): New variable. Julien Lepiller2017-01-161-0/+28
* gnu: camlzip: Install both modules.•••* gnu/packages/ocaml.scm (camlzip) [arguments]: Install both zip and camlzip modules. Julien Lepiller2017-01-161-4/+13
* gnu: Add python-autopep8.•••* gnu/packages/python.scm (python-autopep8, python2-autopep8): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2017-01-161-0/+28
* gnu: kdevelop: Set more paths in wrapper script.•••* gnu/packages/kde.scm (kdevelop)[arguments]: Add more paths in wrap-executable: add "/share" output of kdevplatform and kcmutils to $XDG_DATA_DIRS; add "lib/plugins" from user profile to $QT_PLUGIN_PATH. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2017-01-161-4/+7
* gnu: kdevelop: Update to 5.0.3.•••* gnu/packages/kde.scm (kdevelop, kdevplatform): Update to 5.0.3. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2017-01-161-5/+5
* gnu: linux-libre: Update to 4.9.4.•••* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash) (linux-libre): Update to 4.9.4. Mark H Weaver2017-01-161-4/+4
* gnu: linux-libre@4.4: Update to 4.4.43.•••* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.43. Mark H Weaver2017-01-161-2/+2
* gnu: dwm: Add '.desktop' file.•••Fixes <https://bugs.gnu.org/25438>. * gnu/packages/suckless.scm (dwm)[arguments]: Add 'install-xsession' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng02017-01-161-1/+20
* gnu: dwm: Use modify-phases.•••* gnu/packages/suckless.scm (dwm): Use modify-phases. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng02017-01-161-14/+12
* gnu: zathura-pdf-poppler: Update to 0.2.7.•••* gnu/packages/pdf.scm (zathura-pdf-poppler): Update to 0.2.7. Marius Bakke2017-01-161-2/+2
* gnu: zathura-djvu: Update to 0.2.6.•••* gnu/packages/pdf.scm (zathura-djvu): Update to 0.2.6. Marius Bakke2017-01-161-2/+2
* gnu: zathura-ps: Update to 0.2.4.•••* gnu/packages/pdf.scm (zathura-ps): Update to 0.2.4. Marius Bakke2017-01-161-2/+2
* gnu: zathura-cb: Update to 0.1.6.•••* gnu/packages/pdf.scm (zathura-cb): Update to 0.1.6. Marius Bakke2017-01-161-2/+2
* gnu: zathura: Update to 0.3.7.•••* gnu/packages/pdf.scm (zathura): Update to 0.3.7. Marius Bakke2017-01-161-2/+2
* gnu: girara: Update to 0.2.7.•••* gnu/packages/gtk.scm (girara): Update to 0.2.7. Marius Bakke2017-01-161-2/+2
* gnu: vim: Update to 8.0.0194.•••* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0194. Marius Bakke2017-01-161-2/+2
* gnu: ccid: Update to 1.4.26.•••* gnu/packages/security-token.scm (ccid): Update to 1.4.26. Marius Bakke2017-01-161-3/+3
* gnu: dnscrypt-proxy: Update to 1.9.2.•••* gnu/packages/dns.scm (dnscrypt-proxy): Update to 1.9.2. Marius Bakke2017-01-161-2/+2
* Merge branch 'gnome-updates'Mark H Weaver2017-01-1610-218/+348
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| * gnu: mate-themes: Update source hash.•••This is a followup to commit 44350d23da826731adc187b478e00b2601ab78dc. * gnu/packages/mate.scm (mate-themes)[source]: Update hash. * gnu/packages/gtk.scm (gtk+): Add reminder comment. Mark H Weaver2017-01-142-1/+3
| * Merge branch 'master' into gnome-updatesMark H Weaver2017-01-1422-161/+1083
| |\
| * | gnu: gnome-session: Update to 3.22.2.•••* gnu/packages/gnome.scm (gnome-session): Update to 3.22.2. Mark H Weaver2017-01-111-2/+2
| * | gnu: gnome-shell-extensions: Update to 3.22.2.•••* gnu/packages/gnome.scm (gnome-shell-extensions): Update to 3.22.2. Mark H Weaver2017-01-111-2/+2
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