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* Merge branch 'master' into core-updatesMarius Bakke2017-11-191-5059/+101
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| * gnu: Move date/time packages from python.scm to time.scm.•••* gnu/packages/python.scm (python-pytz, python2-pytz, python-dateutil, python2-dateutil, python-parsedatetime, python2-parsedatetime, python-tzlocal, python-isodate, python2-isodate, python-iso8601, python2-iso8601, python-monotonic, python2-monotonic, python-pyrfc3339, python2-pyrfc3339, python-arrow, python2-arrow, python-aniso8601, python2-aniso8601): Move from here... * gnu/packages/time.scm: ...to here. * gnu/packages/calendar.scm, gnu/packages/check.scm, gnu/packages/django.scm, gnu/packages/ebook.scm, gnu/packages/gnome.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/mail.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/rdf.scm, gnu/packages/statistics.scm, gnu/packages/tls.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm: Adjust accordingly. Ricardo Wurmus2017-11-181-253/+1
| * gnu: Move more testing packages from python.scm to check.scm.•••* gnu/packages/python.scm (python-flexmock, python2-flexmock, python-freezegun, python2-freezegun, python-flaky, python2-flaky): Move from here... * gnu/packages/check.scm: ...to here. Ricardo Wurmus2017-11-181-87/+0
| * gnu: Move database packages from python.scm to databases.scm.•••* gnu/packages/python.scm (python-ccm, python2-ccm, python2-pysqlite, python-sqlalchemy, python2-sqlalchemy, python-sqlalchemy-utils, python2-sqlalchemy-utils, python-alembic, python2-alembic, python-pickleshare, python2-pickleshare, python-apsw, python2-apsw, python2-neo4j-driver, python2-py2neo, python-psycopg2, python2-psycopg2, python-sadisplay, python2-sadisplay, python-mysqlclient, python2-mysqlclient, python-hiredis, python2-hiredis, python-fakeredis, python2-fakeredis, python-redis, python2-redis, python-rq, python2-rq, python-trollius-redis, python2-trollius-redis, python-sqlparse, python2-sqlparse, python-sql, python2-sql): Move from here... * gnu/packages/databases.scm: ...to here. * gnu/packages/tryton.scm, gnu/packages/python-web.scm, gnu/packages/nutrition.scm, gnu/packages/medical.scm: Adjust accordingly. Ricardo Wurmus2017-11-171-546/+0
| * gnu: python-scikit-learn: Move from python.scm to machine-learning.scm.•••* gnu/packages/python.scm (python-scikit-learn, python2-scikit-learn): Move from here... * gnu/packages/machine-learning.scm: ...to here. Ricardo Wurmus2017-11-171-49/+1
| * gnu: Move more web packages from python.scm to python-web.scm.•••* gnu/packages/python.scm (python-pastescript, python2-pastescript, python-paste, python2-paste, python-werkzeug, python2-werkzeug, python-bottle, python2-bottle, python-wtforms, python2-wtforms): Move from here... * gnu/packages/python-web.scm: ...to here. Ricardo Wurmus2017-11-171-149/+0
| * gnu: Move testing packages from python.scm to check.scm.•••* gnu/packages/python.scm (python-behave-web-api, python2-behave-web-api, python-mock, python2-mock, python-mock-2, python-nose, python2-nose, python-nose2, python2-nose2, python-unittest2, python2-unittest2, python-pytest, python2-pytest, python-pytest-3.0, python2-pytest-3.0, python-pytest-cov, python2-pytest-cov, python-pytest-runner, python2-pytest-runner, python-pytest-mock, python2-pytest-mock, python-pytest-xdist, python2-pytest-xdist, python-scripttest, python2-scripttest, python-testtools, python2-testtools, python-testscenarios, python2-testscenarios, python-testresources, python2-testresources, python-subunit, python2-subunit, python-fixtures, python2-fixtures, python-testrepository, python2-testrepository, python-coverage, python2-coverage, python-cov-core, python2-cov-core, python-testpath, python2-testpath, python-testlib, python2-testlib, python-pytest-cache, python2-pytest-cache, python-pytest-localserver, python-pytest-xprocess, python-pytest-subtesthack, python2-pytest-subtesthack, python-hypothesis, python2-hypothesis, python-lit, python2-lit, python-pytest-pep8, python2-pytest-pep8, python-pytest-flakes, python2-pytest-flakes, python2-coverage-test-runner, python-pylint, python2-pylint, python-paramunittest, python2-python-paramunittest, python-pytest-warnings, python2-pytest-warnings, python-pytest-capturelog, python2-pytest-capturelog, python-pytest-catchlog, python2-pytest-catchlog, python-nosexcover, python2-nosexcover, python-discover, python2-discover, behave, python-rednose, python2-rednose, python-nose-randomly, python2-nose-randomly, python-nose-timer, python2-nose-timer): Move from here... * gnu/packages/check.scm: ...to here. * gnu/packages/admin.scm, gnu/packages/android.scm, gnu/packages/backup.scm, gnu/packages/bioinformatics.scm, gnu/packages/calendar.scm, gnu/packages/dav.scm, gnu/packages/django.scm, gnu/packages/freedesktop.scm, gnu/packages/haskell.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/ldc.scm, gnu/packages/libffi.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/password-utils.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/rdf.scm, gnu/packages/statistics.scm, gnu/packages/storage.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/tryton.scm: Adjust accordingly. Ricardo Wurmus2017-11-171-1330/+2
| * gnu: Move more packages from python to python-web.•••* gnu/packages/python.scm (python-requests, python2-requests) (python-requests-2.7, python-oauthlib, python2-oauthlib) (python-furl, python2-furl, python-wsgi-intercept) (python-publicsuffix, python2-publicsuffix) (python-publicsuffix2, python2-publicsuffix2): Move to... * gnu/packages/python-web.scm: ... here. * gnu/packages/bioinformatics.scm, gnu/packages/finance.scm: gnu/packages/maths.scm, gnu/packages/terminals.scm, gnu/packages/video.scm, gnu/packages/virtualization.scm: Adjust accordingly. Ludovic Courtès2017-11-161-173/+0
| * gnu: Move crypto packages from python to python-crypto.•••* gnu/packages/python.scm (python-passlib, python2-passlib) (python-py-bcrypt, python2-py-bcrypt) (python-paramiko, python2-paramiko, python-ecdsa, python2-ecdsa) (python-pycrypto, python2-pycrypto, python-keyring, python2-keyring) (python-certifi, python2-certifi) (python-cryptography-vectors, python2-cryptography-vectors) (python-cryptography, python2-cryptography) (python-pyopenssl, python2-pyopenssl) (python-axolotl-curve25519, python2-axolotl-curve25519) (python-axolotl, python2-axolotl, python2-slowaes) (python-pyaes, python2-pyaes): Move to... * gnu/packages/python-crypto.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/admin.scm, gnu/packages/backup.scm, gnu/packages/crypto.scm, gnu/packages/finance.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/messaging.scm, gnu/packages/openstack.scm, gnu/packages/python-web.scm, gnu/packages/tls.scm, gnu/packages/xorg.scm: Adjust accordingly. Ludovic Courtès2017-11-161-463/+1
| * gnu: Move web packages from python to python-web.•••This is in part to address <https://bugs.gnu.org/27284>. * gnu/packages/python.scm (python-httplib2, python2-httplib2) (python-sockjs-tornado, python2-sockjs-tornado) (python-flask-babel, python2-flask-babel) (python-html5lib, python2-html5lib) (python-html5lib-0.9, python2-html5lib-0.9) (python-html5-parser, python2-html5-parser) (python-webencodings, python2-webencodings) (python-openid, python2-openid, python-cssutils, python2-cssutils) (python-cssselect, python2-cssutils) (python-openid-cla, python2-openid-cla) (python-openid-teams, python2-openid-teams) (python-tornado, python2-tornado) (python-tornado-http-auth, python-terminado, python2-terminado) (python-webob, python2-webob, python-zope-event, python2-zope-event) (python-zope-interface, python2-zope-interface) (python-zope-exceptions, python2-zope-exceptions) (python-zope-testing, python2-zope-testing) (python-zope-testrunner, python2-zope-testrunner) (python-zope-i18nmessageid, python2-zope-i18nmessageid) (python-zope-schema, python2-zope-schema) (python-zope-configuration, python2-zope-configuration) (python-zope-proxy, python2-zope-proxy) (python-zope-location, python2-zope-location) (python-zope-security, python2-zope-security) (python-zope-component, python2-zope-component) (python-ndg-httpsclient, python2-ndg-httpsclient) (python-websocket-client, python2-websocket-client) (python-requests-toolbelt, python2-requests-toolbelt) (python-rauth, python2-rauth, python-urllib3, python2-urllib3) (awscli, python-wsgiproxy2, python2-wsgiproxy2) (python-pastedeploy, python2-pastedeploy) (python-webtest, python2-webtest, python-flask, python2-flask) (python-flast-wtf, python2-flask-wtf) (python-flask-multistatic, python2-flask-multistatic) (python-cookies, python2-cookies) (python-responses, python2-responses) (python-geventhttpclient, python2-geventhttpclient) (python-requests-oauthlib, python2-requests-oauthlib) (python-url, python2-url, python-cachecontrol, python2-cachecontrol) (python-betamax, python2-betamax) (python-betamax-matchers, python2-betamax-matchers) (python-s3transfer, python2-s3transfer) (python-flask-restful, python-flask-basicauth) (python-flask-sqlalchemy, python-flask-restplus) (python-flask-restful-swagger, python-htmlmin, python2-htmlmin) (python-flask-htmlmin, python2-flask-htmlmin) (python-flask-login, python2-flask-login) (python-oauth2client, python-flask-oidc) (python-webassets, python-cssmin, python2-cssmin) (python-elasticsearch, python2-elasticsearch) (python-flask-script, python2-flask-script) (python-flask-migrate, python2-flask-migrate) (python-genshi, python2-genshi) (python-flask-principal, python2-flask-principal) (python-flask-httpauth, python2-flask-httpauth) (python-uritemplate, python2-uritemplate): Move to... * gnu/packages/python-web.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/admin.scm, gnu/packages/backup.scm, gnu/packages/dav.scm, gnu/packages/django.scm, gnu/packages/docker.scm, gnu/packages/ebook.scm, gnu/packages/logging.scm, gnu/packages/mail.scm, gnu/packages/music.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/rdf.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm, gnu/packages/web-browsers.scm, gnu/packages/web.scm: Adjust accordingly. Ludovic Courtès2017-11-131-2028/+1
| * gnu: python2-rpython: Update to 0.2.1.•••* gnu/packages/python.scm (python2-rpython): Update to 0.2.1. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Alex Vong2017-11-111-2/+2
| * gnu: python-sympy: Update to 1.1.1.•••* gnu/packages/python.scm (python-sympy, python2-sympy): Update to 1.1.1. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Alex Vong2017-11-111-3/+3
| * gnu: python-sqlparse: Fix syntax error.•••This is a follow-up to commit 8d688cd27f267f4d143d0f20ed3c352188151302. * gnu/packages/python.scm (python-sqlparse)[arguments]: Add missing lambda. Marius Bakke2017-11-111-1/+1
| * gnu: python-sqlparse: Update to 0.2.4.•••* gnu/packages/python.scm (python-sqlparse, python2-sqlparse): Update to 0.2.4. [arguments]: Don't invoke ‘2to3’. Tobias Geerinckx-Rice2017-11-111-9/+3
| * gnu: python-icalendar: Update to 4.0.0.•••* gnu/packages/python.scm (python-icalendar): Update to 4.0.0. Leo Famulari2017-11-081-2/+2
| * gnu: Add python-networkx2.•••* gnu/packages/python.scm (python-networkx2, python2-networkx2): New variables. * gnu/local.mk (dist_patch_DATA): Register 'python-networkx2-reproducible-build.patch'. * gnu/packages/patches/python-networkx2-reproducible-build.patch: New file. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Gábor Boskovits2017-11-071-0/+19
| * gnu: Add python-jsonrpclib-pelix.•••* gnu/packages/python.scm (python-jsonrpclib-pelix, python2-jsonrpclib-pelix): New variables. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Carlo Zancanaro2017-11-071-0/+24
| * gnu: python-decorator: Update to 4.1.2.•••* gnu/packages/python.scm (python-decorator): Update to 4.1.2. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Gábor Boskovits2017-11-051-2/+2
| * gnu: Add python-dukpy, python2-dukpy.•••gnu/packages/python.scm (python-dukpy, python2-dukpy): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Brendan Tildesley2017-11-051-0/+26
* | Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2017-11-011-10/+161
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| * gnu: snakemake: Update to 4.2.0.•••* gnu/packages/python.scm (snakemake): Update to 4.2.0. [propagated-inputs]: Add python-appdirs, python-configargparse, python-pyyaml, and python-ratelimiter, which are dependencies as of Snakemake 4.1.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Kyle Meyer2017-10-271-3/+7
| * gnu: Add python-ratelimiter.•••* gnu/packages/python.scm (python-ratelimiter, python2-ratelimiter): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Kyle Meyer2017-10-271-0/+24
| * gnu: python-configargparse: Update to 0.12.0.•••* gnu/packages/python.scm (python-configargparse, python2-configargparse): Update to 0.12.0. [arguments]: Enable tests. [native-inputs]: Add python-pyyaml, which is an optional dependency but required to run the tests. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Kyle Meyer2017-10-271-7/+17
| * gnu: Add python-coloredlogs.•••* gnu/packages/python.scm (python-coloredlogs, python2-coloredlogs): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng02017-10-251-0/+29
| * gnu: Add python-verboselogs.•••* gnu/packages/python.scm (python-verboselogs, python2-verboselogs): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng02017-10-251-0/+26
| * gnu: Add python-capturer.•••* gnu/packages/python.scm (python-capturer, python2-capturer): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng02017-10-251-0/+28
| * gnu: Add python-humanfriendly.•••* gnu/packages/python.scm (python-humanfriendly, python2-humanfriendly): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ng02017-10-251-0/+30
* | Merge remote-tracking branch 'origin/python-updates' into core-updatesEfraim Flashner2017-10-261-160/+179
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| * | gnu: python@3.6: Fix building on aarch64.•••* gnu/packages/python.scm (python@3.6)[source]: Remove another test. Efraim Flashner2017-10-201-2/+3
| * | gnu: python-coverage: Update to 4.4.1.•••* gnu/packages/python.scm (python-coverage): Update to 4.4.1. Marius Bakke2017-10-191-2/+2
| * | gnu: python-unittest2: Update to 1.1.0.•••* gnu/packages/python.scm (python-unittest2): Update to 1.1.0. [source]: Use PYPI-URI. Add two patches. [arguments]: Add phase to run tests. [propagated-inputs]: Add PYTHON-SIX and PYTHON-TRACEBACK2. (python2-unittest2): Use 'package-with-python2'. * gnu/packages/patches/python2-unittest2-remove-argparse.patch: Rename to ... * gnu/packages/patches/python2-unittest2-remove-argparse.patch: ... this. * gnu/packages/patches/python-unittest2-python3-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke2017-10-191-25/+16
| * | gnu: python-jinja2: Remove workaround for < Python 3.6.•••* gnu/packages/python.scm (python-jinja2)[arguments]: Remove field. Marius Bakke2017-10-191-12/+0
| * | gnu: Remove python-mock@1.•••* gnu/packages/python.scm (python-mock): Update to 2.0.0. [native-inputs]: Add PYTHON-UNITTEST2. [propagated-inputs]: Add PYTHON-PBR and PYTHON-SIX. [arguments]: Override 'check' phase. [properties]: Declare python2 variant. (python2-mock)[propagated-inputs]: Add PYTHON2-FUNCTOOLS32 and PYTHON2-FUNCSIGS. (python-mock-2): Remove variable. * gnu/packages/python.scm (python-flake8)[native-inputs]: Adjust accordingly. * gnu/packages/tls.scm (python-acme, certbot)[native-inputs]: Likewise. Marius Bakke2017-10-191-25/+22
| * | gnu: Add python2-funcsigs.•••* gnu/packages/python.scm (python2-funcsigs): New variable. Marius Bakke2017-10-191-0/+21
| * | gnu: python-flake8: Update to 3.4.1.•••* gnu/packages/python.scm (python-flake8): Update to 3.4.1. [source]: Remove obsolete snippet. [arguments]: Override 'check' phase. [propagated-inputs]: Remove PYTHON-PEP8. Add PYTHON-PYCODESTYLE and PYTHON-SETUPTOOLS. [native-inputs]: Change PYTHON-MOCK to PYTHON-MOCK-2. Remove PYTHON-NOSE. Add PYTHON-PYTEST-BOOTSTRAP and PYTHON-PYTEST-RUNNER. [properties]: Declare python2 variant. * gnu/packages/python.scm (python-flake8)[propagated-inputs]: Add PYTHON2-ENUM and PYTHON2-CONFIGPARSER. Marius Bakke2017-10-191-14/+23
| * | gnu: Add python2-enum.•••* gnu/packages/python.scm (python2-enum): New variable. Marius Bakke2017-10-191-0/+22
| * | gnu: Fix pytest dependency cycle.•••* gnu/packages/python.scm (python-traceback2, python-linecache2)[native-inputs]: Use PYTHON-PBR-MINIMAL instead of PYTHON-PBR. Marius Bakke2017-10-191-2/+2
| * | gnu: python-mock@2: Add dependency on python-six.•••* gnu/packages/python.scm (python-mock-2)[propagated-inputs]: Add PYTHON-SIX. Marius Bakke2017-10-191-0/+1
| * | gnu: python-mccabe: Update to 0.6.1.•••* gnu/packages/python.scm (python-mccabe): Update to 0.6.1. Marius Bakke2017-10-191-2/+2
| * | gnu: python-pyflakes: Update to 1.5.0.•••* gnu/packages/python.scm (python-pyflakes): Update to 1.5.0. Marius Bakke2017-10-191-2/+2
| * | gnu: python-pytest: Update to 3.2.3.•••* gnu/packages/python.scm (python-pytest): Update to 3.2.3. [native-inputs]: Add PYTHON-SETUPTOOLS-SCM. (python-pytest)[native-inputs]: Likewise. (python2-pytest)[native-inputs]: Remove PYTHON2-ENUM34. Marius Bakke2017-10-191-11/+6
| * | gnu: python-setuptools-scm: Update to 1.15.6.•••* gnu/packages/python.scm (python-setuptools-scm): Update to 1.15.6. Marius Bakke2017-10-191-2/+2
| * | gnu: python-pytest: Add a minimal variant for bootstrapping.•••* gnu/packages/python.scm (python-pytest-bootstrap, python2-pytest-bootstrap): New variables. (python-six, python-hypothesis, python-pytest-runner, python-mccabe)[native-inputs]: Use PYTHON-PYTEST-BOOTSTRAP instead of PYTHON-PYTEST. Marius Bakke2017-10-191-4/+14
| * | gnu: Remove python-pytest@2.•••* gnu/packages/python.scm (python-pytest): Update to 3.0.7. [source]: Move substitution to ... [arguments]: ... here. Incorporate phase from pytest-3.0. [native-inputs]: Add PYTHON-HYPOTHESIS. (python-pytest-3.0): Remove variable. (python2-pytest-3.0): Rename to ... (python2-pytest): ... this. [native-inputs]: Add PYTHON2-ENUM34. * gnu/packages/backup.scm (borg)[native-inputs]: Replace PYTHON-PYTEST-3.0 with PYTHON-PYTEST. * gnu/packages/calendar.scm (khal): Likewise. * gnu/packages/databases.scm (python-orator): Likewise. * gnu/packages/python.scm (python-sphinx-1.6, python-sphinx-1.5.3, python-pexpect, python-cryptography, python-pyopenssl, python-pytest-warnings, python-pytest-capturelog, python-pytest-catchlog, python-marshmallow, python-apispec, python-flasgger, python-pyjwt, python-grako, python-honcho): Likewise. * gnu/packages/web.scm (python-internetarchive): Likewise. Marius Bakke2017-10-191-57/+35
| * | gnu: python-six: Update to 1.11.0.•••* gnu/packages/python.scm (python-six): Update to 1.11.0. Marius Bakke2017-10-191-2/+2
| * | gnu: python-six: Really enable tests.•••* gnu/packages/python.scm (python-six)[arguments]: Override 'check' phase. Marius Bakke2017-10-191-0/+6
| * | gnu: python-py: Update to 1.4.34.•••* gnu/packages/python.scm (python-py, python2-py): Update to 1.4.34. Marius Bakke2017-10-191-2/+2
| * | gnu: python@3: Update to 3.6.3.•••* gnu/packages/patches/python-3.5-fix-tests.patch: Rename to ... * gnu/packages/patches/python-3-fix-tests.patch: ... this. Adjust and disable more tests. * gnu/packages/patches/python-3.5-getentropy-on-old-kernels.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python.scm (python-2.7)[argument]: Patch '/bin/sh' in one more file. (python-3.5): Rename to ... (python-3.6): ... this. Update to 3.6.3. [source](patches): Remove obsolete patch, adjust to patch rename. (python-3): Use PYTHON-3.6. Marius Bakke2017-10-191-6/+6
| * | gnu: python@2: Update to 2.7.14.•••* gnu/packages/python.scm (python-2.7): Update to 2.7.14. [source]: Add patch to skip two new tests. Delete upstreamed patch. * gnu/packages/patches/python-2.7-adjust-tests.patch: New file. * gnu/packages/patches/python-2.7-getentropy-on-old-kernels.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke2017-10-191-3/+3
* | | Merge branch 'master' into core-updatesMarius Bakke2017-10-241-12/+5
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