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| * gnu: python2-fastlmm: Move to machine-learning.scm.•••This is a step towards removing OCaml modules from the closure of (gnu packages python). * gnu/packages/python.scm (python2-fastlmm): Move to... * gnu/packages/machine-learning.scm (python2-fastlmm): ... here. Ludovic Courtès2019-01-071-35/+0
| * gnu: python-pyicu: Update to 2.2.•••* gnu/packages/python.scm (python-pyicu): Update to 2.2. Efraim Flashner2019-01-061-2/+2
| * gnu: python-pysocks: Update to 1.6.8.•••* gnu/packages/python.scm (python-pysocks): Update to 1.6.8. Efraim Flashner2019-01-061-2/+2
| * gnu: python-packaging: Update to 18.0.•••* gnu/packages/python.scm (python-packaging): Update to 18.0. Efraim Flashner2019-01-061-2/+2
| * gnu: python-astroid: Update to 2.1.0.•••* gnu/packages/python.scm (python-astroid): Update to 2.1.0. Efraim Flashner2019-01-061-9/+9
| * gnu: python-imagesize: Update to 1.1.0.•••* gnu/packages/python.scm (python-imagesize): Update to 1.1.0. Efraim Flashner2019-01-061-3/+3
| * gnu: python-sphinx-alabaster-theme: Update to 0.7.12.•••* gnu/packages/python.scm (python-sphinx-alabaster-theme): Update to 0.7.12. Efraim Flashner2019-01-061-3/+3
| * gnu: jupyter: Add missing dependency.•••* gnu/packages/python.scm (jupyter)[propagated-inputs]: Add python-qtconsole. [home-page]: Use https URL. [arguments]: Update comment on why tests are disabled. Ricardo Wurmus2019-01-021-7/+5
| * gnu: Add python-qtconsole.•••* gnu/packages/python.scm (python-qtconsole): New variable. Ricardo Wurmus2019-01-021-0/+36
| * gnu: python-notebook: Update to 5.7.4.•••* gnu/packages/python.scm (python-notebook): Update to 5.7.4. [arguments]: Use INVOKE for tests. [propagated-inputs]: Remove python-ipython; add python-prometheus-client, python-send2trash, and python-terminado. Ricardo Wurmus2019-01-021-5/+14
| * gnu: python-jupyter-console: Fix inputs.•••* gnu/packages/python.scm (python-jupyter-console)[propagated-inputs]: Remove python-ipython; replace python-prompt-toolkit with python-prompt-toolkit-1. [native-inputs]: Add python-nose. Ricardo Wurmus2019-01-021-3/+4
| * gnu: python-ipython: Remove dependency on python-jupyter-core-minimal.•••* gnu/packages/python.scm (python-ipython)[propagated-inputs]: Remove python-jupyter-core-minimal. Ricardo Wurmus2019-01-021-6/+0
| * gnu: python-ipywidgets: Enable tests.•••* gnu/packages/python.scm (python-ipywidgets)[arguments]: Remove. [native-inputs]: Add python-nose and python-pytest. [propagated-inputs]: Remove python-ipykernel. Ricardo Wurmus2019-01-021-4/+4
| * gnu: python-widgetsnbextension: Update to 3.4.2.•••* gnu/packages/python.scm (python-widgetsnbextension): Update to 3.4.2. [propagated-inputs]: Add python-ipykernel. Ricardo Wurmus2019-01-021-3/+4
| * gnu: Add python-send2trash.•••* gnu/packages/python.scm (python-send2trash, python2-send2trash): New variables. Ricardo Wurmus2019-01-021-0/+22
| * gnu: Add python-prometheus-client.•••* gnu/packages/python.scm (python-prometheus-client, python2-prometheus-client): New variables. Ricardo Wurmus2019-01-021-0/+25
| * gnu: python-jupyter-client: Update to 5.2.4.•••* gnu/packages/python.scm (python-jupyter-client): Update to 5.2.4. Ricardo Wurmus2019-01-021-2/+2
| * gnu: python-ipython: Break dependency on python-ipykernel.•••* gnu/packages/python.scm (python-ipython)[propagated-inputs]: Remove python-ipykernel. [arguments]: Delete more broken tests. Ricardo Wurmus2019-01-021-6/+14
| * gnu: python-ipykernel: Update to 5.1.0.•••* gnu/packages/python.scm (python-ipykernel): Update to 5.1.0. [arguments]: Enable tests. [propagated-inputs]: Add python-ipython. [native-inputs]: Add python-pytest and python-nose. Ricardo Wurmus2019-01-021-7/+16
| * gnu: python-ipython: Update to 5.8.0.•••* gnu/packages/python.scm (python-ipython): Update to 5.8.0. [propagated-inputs]: Replace python-prompt-toolkit with python-prompt-toolkit-1. [arguments]: Use INVOKE in the "check" phase; return #T from the "fix-tests" phase. Ricardo Wurmus2019-01-021-53/+57
| * gnu: Add python-prompt-toolkit-1.•••* gnu/packages/python.scm (python-prompt-toolkit-1, python2-prompt-toolkit-1): New variables. Ricardo Wurmus2019-01-021-0/+14
| * gnu: python-prompt-toolkit: Update to 2.0.7.•••* gnu/packages/python.scm (python-prompt-toolkit): Update to 2.0.7. [arguments]: Enable tests; add phase "post-install-check" and delete "check" phase. [native-inputs]: Add python-pytest. Ricardo Wurmus2019-01-021-21/+32
| * gnu: python-hy: Use INVOKE.•••* gnu/packages/python.scm (python-hy)[arguments]: Use INVOKE. Ricardo Wurmus2019-01-021-1/+1
| * gnu: python-clint: Use INVOKE.•••* gnu/packages/python.scm (python-clint)[arguments]: Use INVOKE. Ricardo Wurmus2019-01-021-2/+1
| * gnu: python-configargparse: Use INVOKE.•••* gnu/packages/python.scm (python-configargparse)[arguments]: Use INVOKE. Ricardo Wurmus2019-01-021-1/+1
| * gnu: python-docopt: Use INVOKE.•••* gnu/packages/python.scm (python-docopt)[arguments]: Use INVOKE. Ricardo Wurmus2019-01-021-1/+1
| * gnu: python-lxml: Update to 4.2.5 [fixes CVE-2018-19787].•••* gnu/packages/python.scm (python-lxml, python2-lxml): Update to 4.2.5. Leo Famulari2018-12-311-2/+2
| * gnu: python-apache-libcloud: Update to 2.4.0.•••* gnu/packages/python.scm (python-apache-libcloud): Update to 2.4.0. Efraim Flashner2018-12-261-3/+3
* | gnu: python2: Fix test flags.•••Reverts a9883939977f5fb0bd62d1dccb1ab0a772a4b720 in favor of a cleaner approach. * gnu/packages/python.scm (python-2.7)[arguments]: 'EXTRATESTOPTS' -> 'TESTOPTS'. This overrides the default '-l' argument for memory leak checks which is not compatible with the -j for parallelism. Eric Bavier2019-01-221-10/+2
* | gnu: python-futures: Enable tests.•••Re-enable the tests, as the python-2 package now has the support directory. Also, switch to running the tests via the test_futures.py script to avoid errors like: AttributeError: 'AsCompletedTests' object has no attribute 'executor' * gnu/packages/python.scm (python2-futures)[arguments]: Run the test_futures.py script to run the tests. Christopher Baines2019-01-211-5/+8
* | gnu: python-2.7: Include /lib/python.../test/support.•••Don't remove the support directory from the /lib/python.../test/ directory, as this is used from the test_support module. /gnu/store/...-python2-2.7.15/lib/python2.7/test/test_support.py:2: in <module> import test.support E ImportError: No module named support * gnu/packages/python.scm (python-2.7)[arguments]: Change the 'remove-tests phase to not remove the support directory. Christopher Baines2019-01-211-4/+1
* | gnu: python-pycodestyle: Fix build with Python 3.7.•••* gnu/packages/patches/python-pycodestyle-stdlib-tokenize-fix.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pycodestyle)[source]: Use it. Eric Bavier2019-01-141-1/+2
* | gnu: python-2.7: Fix build.•••The -j flag is passed in through #:make-flags and EXTRATESTOPTS. This is combined with the TESTOPTS, and in Python 2, that includes the -l flag by default. The -l flag, is for finding memory leaks in tests, and is incompatible with the -j flag, and the build previously failed at the start of the 'check phase. Therefore, remove the -l flag from the Python 2 testsuite, as it doesn't sound like a useful thing to do when building the package for Guix. * gnu/packages/python.scm (python-2.7): Add 'remove-findleaks-from-testopts phase. Christopher Baines2019-01-131-0/+8
* | Merge branch 'master' into core-updatesLudovic Courtès2018-12-201-23/+137
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| * gnu: python-pyelftools: Fix tests with python 3.7.•••* gnu/packages/python.scm (python-pyelftools) [native-inputs]: Remove python-setuptools. [arguments]: Add set-pythonpath phase. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Vagrant Cascadian2018-12-161-3/+11
| * gnu: python-celery: Update to 4.2.1.•••This is an attempt to get the package building after the update to Python 3.7. I'm not sure this totally works, as the tests detect an incompatibility with Python 3.7 due to use of "async". But with the tests disabled, you can at least import the celery module, which is a start. * gnu/packages/python.scm (python-celery): Update to 4.2.1. [arguments]: Switch to py.test, from nose, disable the tests and loosen the requirements on pytest. [native-inputs]: Remove python-nose, add python-pytest and python-case. [home-page]: Change from HTTP to HTTPS. Christopher Baines2018-12-121-10/+14
| * gnu: python-billiard: Update to 3.5.0.5.•••This is to enable updating python-celery. * gnu/packages/python.scm (python-billiard): Update to 3.5.0.5. [native-inputs]: Remove python-nose, add python-case and python-pytest. Christopher Baines2018-12-121-3/+4
| * gnu: python-kombu: Update to 4.2.2.•••This fixes the build, that probably broke with a Python update. * gnu/packages/python.scm (python-kombu): Update to 4.2.2.. Christopher Baines2018-12-121-4/+7
| * gnu: python-amqp: Update to 2.3.2.•••This is needed to update python-kombu to 4.2.2. * gnu/packages/python.scm (python-amqp): Update to 2.3.2. Christopher Baines2018-12-121-3/+6
| * gnu: Add python-pyro4.•••This is needed to update python-kombu to 4.2.2 * gnu/packages/python.scm (python-pyro4): New variable. Christopher Baines2018-12-121-0/+22
| * gnu: Add python-vine.•••This is needed to update python-amqp to 2.3.2. * gnu/packages/python.scm (python-vine): New variable. Christopher Baines2018-12-121-0/+24
| * gnu: Add python-case.•••This is required to update python-amqp and python-kombu, as well as adding python-vine. * gnu/packages/python.scm (python-case): New variable. Christopher Baines2018-12-121-0/+26
| * gnu: Add python-serpent.•••This is required for python-pyro4, which is needed to update python-amqp and python-kombu. * gnu/packages/python.scm (python-serpent): New variable. Christopher Baines2018-12-121-0/+23
* | Merge branch 'master' into core-updatesMarius Bakke2018-12-111-210/+664
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| * gnu: python-gevent: Remove unreliable test.•••* gnu/packages/python.scm (python-gevent): Add 'skip-timer-test phase from python2-gevent. * gnu/packages/python.scm (python2-gevent): Remove 'skip-timer-test phase, inherit from python-gevent instead. Rutger Helling2018-12-111-11/+7
| * gnu: python-jedi: Update to 0.13.1 and disable the tests.•••Jedi test suite fails when run with Python 3.7. * gnu/packages/python.scm (python-jedi): Update to 0.13.1 [tests?] Disable. [phases] Add condition check for the tests? argument to run the tests. Maxim Cournoyer2018-12-091-5/+10
| * gnu: python-pyaml: Update to 18.11.0.•••* gnu/packages/python.scm (python-pyaml): Update to 18.11.0. Marius Bakke2018-12-081-2/+2
| * gnu: python-unidecode: Update to 1.0.23.•••* gnu/packages/python.scm (python-unidecode, python2-unidecode): Update to 1.0.23. Leo Famulari2018-12-031-2/+2
| * gnu: python-scikit-image: Propagate six and numpy.•••* gnu/packages/python.scm (python-scikit-image)[native-inputs]: Move PYTHON-NUMPY and PYTHON-SIX ... [propagated-inputs]: ... here. Marius Bakke2018-12-031-4/+4
| * gnu: python-scikit-image: Update to 0.14.1.•••Also add explicit Python2 variants for its dependency closure. * gnu/packages/python.scm (python-scikit-image): Update to 0.14.1. [source](uri): Use PYPI-URI. [propagated-inputs]: Add PYTHON-CLOUDPICKLE, PYTHON-DASK, PYTHON-MATPLOTLIB and PYTHON-PYWAVELETS. (python2-toolz, python2-cloudpickle, python2-locket, python2-blosc, python2-partd, python2-dask): New public variables. Marius Bakke2018-12-031-8/+27