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* gnu: python-binaryornot: Update to 0.4.4.•••* gnu/packages/python.scm (python-binaryornot): Update to 0.4.4. Tobias Geerinckx-Rice2018-09-101-2/+2
* gnu: python-parse: Update to 1.8.4.•••* gnu/packages/python.scm (python-parse): Update to 1.8.4. Tobias Geerinckx-Rice2018-09-101-2/+2
* gnu: python-parse: Mark up description.•••* gnu/packages/python.scm (python-parse)[description]: Use @code{}. Tobias Geerinckx-Rice2018-09-101-1/+1
* gnu: python-jedi: Update to 0.12.1.•••* gnu/packages/python.scm (python-jedi): Update to 0.12.1. [synopsis, description]: Adjust to expanded functionality. Tobias Geerinckx-Rice2018-09-101-6/+9
* gnu: python-parso: Update to 0.3.1.•••* gnu/packages/python.scm (python-parso): Update to 0.3.1. Tobias Geerinckx-Rice2018-09-101-2/+2
* gnu: python-debian: Update home page.•••* gnu/packages/python.scm (python-debian)[home-page]: Set to source repository. Marius Bakke2018-09-101-1/+1
* gnu: python-libarchive-c: Update to 2.8.•••* gnu/packages/python.scm (python-libarchive-c): Update to 2.8. [arguments]: Replace 'check' phase. [native-inputs]: Add PYTHON-MOCK and PYTHON-PYTEST. Marius Bakke2018-09-101-3/+8
* gnu: python-tlsh: Update to 3.4.5.•••* gnu/packages/python.scm (python-tlsh): Update to 3.4.5. Marius Bakke2018-09-101-2/+2
* gnu: Add python-dask.•••* gnu/packages/python.scm (python-dask): New variable. Ricardo Wurmus2018-09-101-0/+45
* gnu: Add python-partd.•••* gnu/packages/python.scm (python-partd): New variable. Ricardo Wurmus2018-09-101-0/+25
* gnu: Add python-blosc.•••* gnu/packages/python.scm (python-blosc): New variable. Ricardo Wurmus2018-09-101-0/+31
* gnu: Add python-locket.•••* gnu/packages/python.scm (python-locket): New variable. Ricardo Wurmus2018-09-101-0/+19
* gnu: Add python-cloudpickle.•••* gnu/packages/python.scm (python-cloudpickle): New variable. Ricardo Wurmus2018-09-101-0/+34
* gnu: Add python-sortedcontainers.•••* gnu/packages/python.scm (python-sortedcontainers): New variable. Ricardo Wurmus2018-09-101-0/+21
* gnu: Add python-cytoolz.•••* gnu/packages/python.scm (python-cytoolz): New variable. Ricardo Wurmus2018-09-101-0/+27
* gnu: Add python-toolz.•••* gnu/packages/python.scm (python-toolz): New variable. Ricardo Wurmus2018-09-101-0/+22
* gnu: Add python-multiprocess.•••* gnu/packages/python.scm (python-multiprocess): New variable. Ricardo Wurmus2018-09-101-0/+22
* gnu: Add python-dill.•••* gnu/packages/python.scm (python-dill): New variable. Ricardo Wurmus2018-09-101-0/+27
* gnu: python-typing: Update to 3.6.6.•••* gnu/packages/python.scm (python-typing): Update to 3.6.6. Tobias Geerinckx-Rice2018-09-101-2/+2
* gnu: python-tables: Update to 3.4.4.•••* gnu/packages/python.scm (python-tables): Update to 3.4.4. Ricardo Wurmus2018-09-051-2/+2
* gnu: python-matplotlib: Update to 2.2.3.•••* gnu/packages/python.scm (python-matplotlib): Update to 2.2.3. Marius Bakke2018-09-031-2/+2
* gnu: python-scipy: Disable broken tests.•••* gnu/packages/python.scm (python-scipy)[arguments]: Skip two broken tests. Ricardo Wurmus2018-09-031-0/+12
* gnu: python-matplotlib: Use python-pyqt-without-qtwebkit.•••* gnu/packages/python.scm (python-matplotlib)[propagated-inputs]: Replace python-pyqt with python-pyqt-without-qtwebkit. Ricardo Wurmus2018-08-311-1/+2
* gnu: Add python-anndata.•••* gnu/packages/python.scm (python-anndata): New variable. Ricardo Wurmus2018-08-291-0/+26
* gnu: Add python-numba.•••* gnu/packages/python.scm (python-numba): New variable. Ricardo Wurmus2018-08-291-0/+84
* gnu: python-apipkg: Update home page.•••* gnu/packages/python.scm (python-apipkg)[home-page]: Update. Tobias Geerinckx-Rice2018-08-281-1/+1
* gnu: python-pygit2: Update to 0.26.4.•••* gnu/packages/python.scm (python-pygit2, python2-pygit2): Update to 0.26.4. [source]: Remove 'python-pygit2-disable-network-tests.patch'. * gnu/packages/patches/python-pygit2-disable-network-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Leo Famulari2018-08-271-4/+2
* gnu: python-pkgconfig: Enable tests.•••* gnu/packages/python.scm (python-pkgconfig)[arguments]: Replace 'check' phase. Signed-off-by: Leo Famulari <leo@famulari.name> Paul Garlick2018-08-221-12/+11
* gnu: python-pkgconfig: Update to 1.3.1.•••* gnu/packages/python.scm (python-pkgconfig): Update to 1.3.1. Signed-off-by: Leo Famulari <leo@famulari.name> Paul Garlick2018-08-221-2/+2
* gnu: python-rpy2: Update to 2.9.4.•••* gnu/packages/python.scm (python-rpy2): Update to 2.9.4. [arguments]: Remove obsolete phases and substitute INVOKE for SYSTEM* now that we can. Tobias Geerinckx-Rice2018-08-211-12/+3
* gnu: python-rpy2: Update home page.•••* gnu/packages/python.scm (python-rpy2)[home-page]: Update URI. Tobias Geerinckx-Rice2018-08-211-1/+1
* gnu: python-py: Use HTTPS home page.•••* gnu/packages/python.scm (python-py)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2018-08-201-1/+1
* Merge branch 'master' into stagingMarius Bakke2018-08-161-3/+25
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| * gnu: Add python-argparse-manpage.•••* gnu/packages/python.scm (python-argparse-manpage): New variable. Ricardo Wurmus2018-08-161-0/+19
| * gnu: python-txamqp: Update to 0.8.2.•••* gnu/packages/python.scm (python-txamqp): Update to 0.8.2. Tobias Geerinckx-Rice2018-08-151-2/+2
| * gnu: python-pep8: Use HTTPS home page.•••Also add a comment about 1.7.1. This doesn't warrant a changelog entry, so you never read this. * gnu/packages/python.scm (python-pep8)[home-page]: Use HTTPS. Tobias Geerinckx-Rice2018-08-131-1/+4
* | gnu: python-cython: Disable tests that fail on armhf.•••* gnu/packages/python.scm (python-cython)[arguments]: On armhf-linux, add phase to disable two tests. Marius Bakke2018-08-161-0/+18
* | Merge branch 'master' into stagingMarius Bakke2018-08-071-1/+1
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| * gnu: python-scipy: Only run default tests.•••* gnu/packages/python.scm (python-scipy)[arguments]: Only run the default test suite. The full test suite is too expensive and brittle. Ricardo Wurmus2018-08-031-1/+1
* | Merge branch 'master' into stagingMarius Bakke2018-07-301-24/+0
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| * gnu: Remove duplicated python-pafy.•••It was first added in 02f8f804f0242df885311715412a1e3ee5436f3b, then again in 2dd12924cf4a30a96262b6d392fcde58c9f10d4b. * gnu/packages/python.scm (python-pafy): Remove duplicated package definition. Christopher Baines2018-07-291-24/+0
* | Merge branch 'master' into stagingMarius Bakke2018-07-281-23/+95
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| * gnu: Add snakemake-4.•••* gnu/packages/python.scm (snakemake-4): New variable. * gnu/packages/bioinformatics.scm (pigx-bsseq, pigx-rnaseq, pigx-scrnaseq, pigx-chipseq)[inputs]: Use it. Ricardo Wurmus2018-07-271-0/+18
| * gnu: snakemake: Add missing dependencies.•••* gnu/packages/python.scm (snakemake)[propagated-inputs]: Add python-datrie, python-docutils, python-jinja2, python-jsonschema, and python-networkx. Ricardo Wurmus2018-07-271-0/+5
| * gnu: Add python-datrie.•••* gnu/packages/python.scm (python-datrie): New variable. Ricardo Wurmus2018-07-271-0/+24
| * gnu: snakemake: Update to 5.2.0.•••* gnu/packages/python.scm (snakemake): Update to 5.2.0. Ricardo Wurmus2018-07-271-2/+2
| * gnu: python-cairocffi: Fix loading of shared libraries.•••Fixes <https://bugs.gnu.org/32170>. * gnu/packages/patches/python-cairocffi-dlopen-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-cairocffi)[inputs]: Add glib, gtk+, pango. [native-inputs]: Add python-pytest. [arguments]: Enable tests. [arguments]<#:phases>[patch-paths]: New phase. Danny Milosavljevic2018-07-161-4/+34
| * gnu: python-pyasn1-modules: Update to 0.2.2.•••* gnu/packages/python.scm (python-pyasn1-modules, python2-pyasn1-modules): Update to 0.2.2. Leo Famulari2018-07-161-2/+2
| * gnu: python-pyasn1: Update to 0.4.3.•••* gnu/packages/python.scm (python-pyasn1, python2-pyasn1): Update to 0.4.3. Leo Famulari2018-07-161-2/+2
| * gnu: python-xenon: Update to 0.5.4.•••* gnu/packages/python.scm (python-xenon): Update to 0.5.4. [arguments]: Remove part of custom 'patch-test-requirements phase. Efraim Flashner2018-07-141-9/+4