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| * gnu: Add python-logutils.•••* gnu/packages/python-xyz.scm (python-logutils): New variable. Roel Janssen2021-05-271-0/+21
| * gnu: Add python-simpervisor.•••* gnu/packages/python-xyz.scm (python-simpervisor): New variable. Efraim Flashner2021-05-271-0/+35
| * gnu: python2-shapely: Remove package.•••* gnu/packages/python-xyz.scm (python2-shapely): Delete variable. Björn Höfling2021-05-251-3/+0
| * gnu: python-matplotlib: Don't hardcode python version.•••* gnu/packages/python-xyz.scm (python-matplotlib)[arguments]: In custom 'install-jquery-ui phase programmatically get the version of python. Efraim Flashner2021-05-241-2/+5
| * gnu: python-nltk: Add missing inputs.•••* gnu/packages/python-xyz.scm (python-nltk)[propagated-inputs]: Add python-click, python-joblib, python-regex, python-tqdm. Efraim Flashner2021-05-241-0/+5
| * gnu: python-nltk-3.4: Add missing input.•••* gnu/packages/python-xyz.scm (python-nltk-3.4)[propagated-inputs]: Add python-six. Efraim Flashner2021-05-241-1/+2
| * gnu: Fix erroneous uses of 'package/inherit'.•••These packages use a different source/version from the inherited package, and thus should not inherit replacements. * gnu/packages/check.scm (googletest-1.8, python-pytest-runner-2): Use record inheritance instead of PACKAGE/INHERIT. * gnu/packages/crates-io.scm (rust-bindgen-0.49, rust-bytes-0.4, rust-colored-1.9.1, rust-difference-1, rust-docopt-0.8, rust-html5ever-0.23, rust-http-0.1, rust-http-body-0.1, rust-loom-0.2, rust-loom-0.1, rust-pulldown-cmark-0.0.8, rust-ring-0.13, rust-rustls-0.12, rust-sct-0.3, rust-term-0.2, rust-untrusted-0.6, rust-webpki-0.18, rust-webpki-roots-0.17, rust-webpki-roots-0.14): Likewise. * gnu/packages/emacs.scm (emacs-next, emacs-next-pgtk, guile-emacs): Likewise. * gnu/packages/guile.scm (guile-2.2.4): Likewise. * gnu/packages/maths.scm (hdf5-1.10, hdf5-1.12): Likewise. * gnu/packages/protobuf.scm (protobuf-3.6, protobuf-3.5, python-protobuf-3.6): Likewise. * gnu/packages/python-web.scm (python2-html2text): Likewise. * gnu/packages/python-xyz.scm (python-pygments/fixed, python2-numpy, python2-urwid, python2-markdown, python2-fonttools): Likewise. * gnu/packages/racket.scm (racket): Likewise. * gnu/packages/sequoia.scm (sequoia4pEp): Likewise. Marius Bakke2021-05-231-8/+10
| * gnu: Remove python2-ipython-cluster-helper.•••Some of its requirements no longer support Python 2 which has left this package broken for a while. * gnu/packages/python-xyz.scm (python2-ipython-cluster-helper): Remove variable. Marius Bakke2021-05-221-3/+0
| * gnu: Remove python2-notebook.•••Some of its requirements no longer support Python 2 which has left this package broken for a while. * gnu/packages/python-xyz.scm (python2-notebook): Remove variable. (python-notebook)[properties]: Remove. Marius Bakke2021-05-221-21/+0
* | gnu: python-pyflakes: Remove obsolete patch.•••This patch was added on 'core-updates' in 43c889de85e79f279931d6cced261f54c9be5075, but no longer necessary since the update to 2.3.1 in 91741db5397174a2e96b4010c3c9ff53d34e8ef0. * gnu/packages/patches/python-pyflakes-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/python-xyz.scm (python-pyflakes)[source](patches): Remove. Marius Bakke2021-05-221-2/+1
* | gnu: python-tqdm: Update to 4.60.0.•••* gnu/packages/python-xyz.scm (python-tqdm): Update to 4.60.0. [native-inputs]: Remove PYTHON-NOSE. Add PYTHON-PYTEST, PYTHON-PYTEST-ASYNCIO, PYTHON-PYTEST-TIMEOUT, PYTHON-SETUPTOOLS-SCM, and PYTHON-TOML. [arguments]: Use pytest instead of nosetests in check phase. Marius Bakke2021-05-221-8/+9
* | gnu: Remove 'texlive-amsfonts/patched'.•••* gnu/packages/tex.scm (texlive-amsfonts)[arguments]: Add the fix from 'texlive-amsfonts/patched'. (texlive-amsfonts/patched): Remove variable. * gnu/packages/python-xyz.scm (python-nbconvert)[native-inputs]: Change from TEXLIVE-AMSFONTS/PATCHED to TEXLIVE-AMSFONTS. Marius Bakke2021-05-221-1/+1
* | Merge branch 'master' into core-updatesMarius Bakke2021-05-221-46/+38
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| * gnu: python2-ttystatus: Add Python 3 variant.•••* gnu/packages/python-xyz.scm (python2-ttystatus): Rename to ... (python-ttystatus): ... this. [name, native-inputs, arguments]: Adjust accordingly. [descriptions]: Remove mentions of Python version and add markup. (python2-ttystatus): Use PACKAGE-WITH-PYTHON2. Marius Bakke2021-05-221-11/+12
| * gnu: python2-cliapp: Add Python 3 variant.•••* gnu/packages/python-xyz.scm (python2-cliapp): Rename to ... (python-cliapp): ... this. [name, native-inputs, propagated-inputs]: Adjust accordingly. [arguments]: Disable tests. [description]: Remove mentions of Python version and add markup. (python2-cliapp): Use PACKAGE-WITH-PYTHON2. Marius Bakke2021-05-221-22/+14
| * gnu: python-scour: Update to 0.38.2.•••* gnu/packages/python-xyz.scm (python-scour): Update to 0.38.2. Björn Höfling2021-05-211-2/+2
| * gnu: python-scour: Correct version.•••* gnu/packages/python-xyz.scm (python-scour): Correct version string from 038.1 to 0.38.1. Björn Höfling2021-05-211-1/+1
| * gnu: python-pikepdf: Update to 2.12.1.•••* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.12.1. Nicolas Goaziou2021-05-211-2/+2
| * gnu: python-pdftotext: Update to 2.1.6.•••* gnu/packages/python-xyz.scm (python-pdftotext): Update to 2.1.6. Tobias Geerinckx-Rice2021-05-181-3/+2
| * gnu: python-pyprind: Update to 2.11.3.•••* gnu/packages/python-xyz.scm (python-pyprind): Update to 2.11.3. Tobias Geerinckx-Rice2021-05-181-2/+2
| * gnu: sniffio: Update to 1.2.0•••Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Sharlatan Hellseher2021-05-151-2/+2
| * gnu: pybind11: Update to 2.6.2.•••* gnu/packages/python-xyz.scm (pybind11): Update to 2.6.2. Marius Bakke2021-05-151-2/+2
* | Merge branch 'master' into core-updatesLudovic Courtès2021-05-151-5/+42
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| * gnu: Add python-fb-re2.•••* gnu/packages/python-xyz.scm (python-fb-re2): New variable. Xinglu Chen2021-05-141-0/+26
| * gnu: python-jupyter-core: Disable config migration.•••* gnu/packages/python-xyz.scm (python-jupyter-core) [#:phases]: Add new phase 'disable-migration, which disables migration of Guix-owned configuration directories. Lars-Dominik Braun2021-05-141-1/+12
| * gnu: python-networkx: Update to 2.5.1.•••* gnu/packages/python-xyz.scm (python-networkx): Update to 2.5.1. Signed-off-by: Leo Famulari <leo@famulari.name> Greg Hogan2021-05-111-2/+2
| * gnu: python-pikepdf: Update to 2.12.0.•••* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.12.0. Nicolas Goaziou2021-05-091-2/+2
* | gnu: Fix references to unbound variables.•••This is a follow-up to f03426420497cd9839f5fb3cb547dbecd8d6053b which introduced new packages that refer to variables that no longer exist. * gnu/packages/python-xyz.scm (python-fastjsonschema)[native-inputs]: Change from PYTHON-PYTEST-6 to PYTHON-PYTEST. (python-nbconvert)[native-inputs]: Change from TEXLIVE-UNION to TEXLIVE-UPDMAP.CFG. * gnu/packages/shells.scm (nushell)[arguments]: Remove #:rust. Marius Bakke2021-05-131-2/+2
* | Merge branch 'master' into core-updates••• Conflicts: gnu/local.mk gnu/packages/bioinformatics.scm gnu/packages/django.scm gnu/packages/gtk.scm gnu/packages/llvm.scm gnu/packages/python-web.scm gnu/packages/python.scm gnu/packages/tex.scm guix/build-system/asdf.scm guix/build/emacs-build-system.scm guix/profiles.scm Marius Bakke2021-05-091-114/+1005
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| * gnu: python-rply: Update to 0.7.8.•••* gnu/packages/python-xyz.scm (python-rply): Update to 0.7.8. Jelle Licht2021-05-081-2/+2
| * gnu: python-language-server: Relax dependency versions.•••* gnu/packages/python-xyz.scm (python-language-server)[arguments]: Add phase to relax pycodestyle and pyflakes version. Vinicius Monego2021-05-081-0/+6
| * gnu: Add python-pyvirtualdisplay.•••* gnu/packages/python-xyz.scm (python-pyvirtualdisplay): New variable. Vinicius Monego2021-05-081-0/+29
| * gnu: Add python-entrypoint2.•••* gnu/packages/python-xyz.scm (python-entrypoint2): New variable. Vinicius Monego2021-05-081-0/+25
| * gnu: Add python-easyprocess.•••* gnu/packages/python-xyz.scm (python-easyprocess): New variable. Vinicius Monego2021-05-081-0/+20
| * gnu: Add python-qtsass.•••* gnu/packages/python-xyz.scm (python-qtsass): New variable. Vinicius Monego2021-05-081-0/+41
| * gnu: python-language-server: Enable tests.•••* gnu/packages/python-xyz.scm (python-language-server): Enable tests. [arguments]: Add phases to enable tests. [propagated-inputs]: Add python-flake8. Vinicius Monego2021-05-081-0/+11
| * gnu: Add python-qstylizer.•••* gnu/packages/python-xyz.scm (python-qstylizer): New variable. Vinicius Monego2021-05-081-0/+38
| * gnu: Add python-pyls-black.•••* gnu/packages/python-xyz.scm (python-pyls-black): New variable. Vinicius Monego2021-05-081-0/+33
| * gnu: Add python-three-merge.•••* gnu/packages/python-xyz.scm (python-three-merge): New variable. Vinicius Monego2021-05-081-0/+34
| * gnu: Add python-textdistance.•••* gnu/packages/python-xyz.scm (python-textdistance): New variable. Vinicius Monego2021-05-081-0/+37
| * gnu: Remove python-ipaddress.•••This package is part of the Python standard library since CPython 3.3. * gnu/packages/python-xyz.scm (python-ipaddress): Merge with ... (python2-ipaddress): ... this. [name, arguments]: Adjust accordingly. Marius Bakke2021-05-071-5/+4
| * gnu: python-hacking: Fix build failure.•••This follows up on 9095fccd0ea7789d5b87e5d1948d875d2029f7da, et.al. * gnu/packages/python-xyz.scm (python-pycodestyle-2.6, python-pyflakes-2.2, python-flake8-3.8): New variables. * gnu/packages/openstack.scm (python-hacking)[propagated-inputs]: Change from PYTHON-FLAKE8 to PYTHON-FLAKE8-3.8. Marius Bakke2021-05-061-0/+38
| * gnu: python-flake8: Update to 3.9.1.•••* gnu/packages/python-xyz.scm (python-flake8): Update to 3.9.1. Marius Bakke2021-05-061-2/+2
| * gnu: python-flake8: Do not delete and recreate check phase.•••* gnu/packages/python-xyz.scm (python-flake8)[arguments]: Replace check phase instead of deleting. Remove trailing #t. Marius Bakke2021-05-061-4/+2
| * gnu: python-flake8: Do not use the 'bootstrap' pytest.•••* gnu/packages/python-xyz.scm (python-flake8)[native-inputs]: Change from PYTHON-PYTEST-BOOTSTRAP to PYTHON-PYTEST. Marius Bakke2021-05-061-1/+1
| * gnu: Remove python-pykka.•••This trivial package is severely outdated and has failed to build for a long time. * gnu/packages/python-xyz.scm (python-pykka): Remove variable. Marius Bakke2021-05-061-26/+0
| * gnu: python-dnspython: Update to 2.1.0.•••* gnu/packages/python-xyz.scm (python-dnspython): Update to 2.1.0. Marius Bakke2021-05-061-2/+2
| * gnu: python-cached-property: Update to 1.5.2.•••* gnu/packages/python-xyz.scm (python-cached-property): Update to 1.5.2. Marius Bakke2021-05-051-2/+2
| * gnu: python-netaddr: Update to 0.8.0.•••* gnu/packages/python-xyz.scm (python-netaddr): Update to 0.8.0. Marius Bakke2021-05-051-2/+2
| * gnu: python-nbconvert: Use patched texlive-amsfonts.•••This is intended to fix a non-deterministic build error when xelatex inspects the fonts directory and finds a broken font from texlive-amsfonts before the correct font in texlive-cm. * gnu/packages/python-xyz.scm (python-nbconvert)[native-inputs]: Replace texlive-amsfonts with texlive-amsfonts/patched. Ricardo Wurmus2021-05-051-1/+1