| Commit message (Expand) | Author | Age | Files | Lines |
|---|
| * | gnu: python-scikit-fem: Update to 9.0.1.•••* gnu/packages/python-science.scm (python-scikit-fem): Update to 9.0.1.
[arguments]<#:test-flags>: Drop it to activate all tests.
[native-inputs]: Add python-autograd, python-pyamg, and python-shapely.
Change-Id: Ic4706196026bd5756b4db8230b15efacdca7d463
| Sharlatan Hellseher | 2024-01-21 | 1 | -6/+7 |
| * | gnu: Add python-pyamg.•••* gnu/packages/python-science.scm (python-pyamg): New variable.
Change-Id: Ibf39fecd14d4e6fd72078b217737e5e5cbbf2321
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Felix Gruber | 2024-01-21 | 1 | -0/+35 |
| * | gnu: python-pandera: Fix build.•••* gnu/packages/python-science.scm (python-pandera): Fix build.
[source]: Delete tests/modin directory.
[native-inputs]: Remove python-modin.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Troy Figiel | 2024-01-20 | 1 | -6/+9 |
| * | gnu: python-pandas-stubs: Update to 1.5.3.230321.•••* gnu/packages/python-science.scm (python-pandas-stubs): Update to
1.5.3.230321.
[arguments]<#:test-flags>: Ignore tests that require a version of
python-pyarrow with ORC integration.
[native-inputs]: Add python-odfpy.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Troy Figiel | 2024-01-20 | 1 | -4/+16 |
| * | gnu: python-plotnine: Reformat with guix style.•••* gnu/packages/python-science.scm (python-plotnine): Reformat with guix style.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Troy Figiel | 2024-01-18 | 1 | -77/+76 |
| * | gnu: python-plotnine: Fix build.•••* gnu/packages/python-science.scm (python-plotnine): Fix build.
[arguments]<#:test-flags>: Add test_custom_shape to ignored tests.
Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
| Troy Figiel | 2024-01-18 | 1 | -2/+2 |
| * | gnu: Add python-pandera.•••* gnu/packages/python-science.scm (python-pandera): New variable.
| Troy Figiel | 2024-01-17 | 1 | -0/+75 |
| * | gnu: Add python-pandas-stubs.•••* gnu/packages/python-science.scm (python-pandas-stubs): New variable.
| Troy Figiel | 2024-01-17 | 1 | -0/+59 |
| * | gnu: python-deepdish: Fix build.•••* gnu/packages/python-science.scm (python-deepdish): Fix build.
[build-system]: Swap to pyproject-build-system.
[arguments]<#:test-flags>: Silent failing tests.
Change-Id: I4c4df66fc80434aaf5b95a7a62b83e0c1c02a4c6
| Sharlatan Hellseher | 2024-01-16 | 1 | -2/+15 |
| * | gnu: python-xarray: Update to 2023.12.0.•••* gnu/packages/python-science.scm (python-xarray): Update to 2023.12.0.
[arguments]: Ignore one test file.
[propagated-inputs]: Add python-packaging.
Change-Id: I6b70f59670f7bc8b56787fe3436579db8ac113bb
| Ricardo Wurmus | 2024-01-16 | 1 | -3/+6 |
| * | gnu: python-pandas: Update to 1.5.3.•••* gnu/packages/python-science.scm (python-pandas): Update to 1.5.3.
[build-system]: Use pyproject-build-system.
[arguments]: Use G-expression; move test flags to #:test-flags; add phase
'patch-build-system; fix substitution of "which" executable; remove
'enable-parallel-build; remove custom 'check phase; add 'pre-check phase.
[propagated-inputs]: Add python-matplotlib.
[native-inputs]: Replace python-cython with python-cython-0.29.35.
Change-Id: I9d09971f707b925f469e29be67fe040c181314ff
| Ricardo Wurmus | 2024-01-16 | 1 | -56/+58 |
| * | gnu: python-scikit-optimize: Make compatible with latest sklearn.•••* gnu/packages/python-science.scm (python-scikit-optimize)[source]: Add
snippet to fix outdated use of "max_features" option.
Change-Id: I4272ffc82b4951315b74b4adee27527e8d513fca
| Ricardo Wurmus | 2024-01-16 | 1 | -1/+9 |
| * | gnu: python-scikit-image: Update to 0.22.0.•••* gnu/packages/python-science.scm (python-scikit-image): Update to 0.22.0.
[source]: Fetch from git repository.
[build-system]: Use pyproject-build-system.
[arguments]: Use G-expression; remove custom 'build phase; simplify 'check
phase; enable all tests.
[propagated-inputs]: Add python-lazy-loader.
[native-inputs]: Add meson-python, python-numpydoc, python-packaging, and
python-wheel.
Change-Id: I00ede026a7941eae36157106f753a21fb64099c3
| Ricardo Wurmus | 2024-01-16 | 1 | -23/+28 |
| * | gnu: python-scipy: Update to 1.11.4.•••* gnu/packages/python-science.scm (python-scipy): Update to 1.11.4.
[arguments]: Use mesonpy backend.
[inputs]: Replace pybind11 with pybind11-2.10.
[native-inputs]: Add python-click, python-doit, python-pooch, and
python-pydevtool; replace python-cython with python-cython-0.29.35.
Change-Id: I4b26e1b6382899bba24f84461f154e97765e08f5
| Ricardo Wurmus | 2024-01-16 | 1 | -9/+8 |
| * | gnu: python-distributed: Disable breaking test.•••This test times out since the merge of the mesa-updates branch.
* gnu/packages/python-science.scm (python-distributed)[arguments]: Disable
test_tell_workers_when_peers_have_left.
Change-Id: Ib65b971a3a821ea13d36a4be60658ffc366ca6ac
| Ricardo Wurmus | 2024-01-10 | 1 | -1/+2 |
| * | gnu: python-vaex-core: Add missing input.•••* gnu/packages/python-science.scm (python-vaex-core)[propagated-inputs]: Add
python-click.
Change-Id: Id91e925832ed107d5b346ba513a9825dc31481f6
| Ricardo Wurmus | 2023-12-15 | 1 | -0/+1 |
| * | gnu: python-pytensor: Update to 2.18.1.•••* gnu/packages/python-science.scm (python-pytensor): Update to 2.18.1.
Change-Id: I7992d8a00c378c008995df3d026c3e05c235ae6d
| Vinicius Monego | 2023-12-05 | 1 | -2/+2 |
| * | gnu: python-gpy: Adjust for newer python.•••* gnu/packages/python-science.scm (python-gpy)[source]: Add snippet to
adjust python module imports.
Change-Id: I0772febb97d75e0a0caa331913c9e7453d11e70d
| Efraim Flashner | 2023-12-05 | 1 | -1/+5 |
| * | gnu: Add python-pyfma.•••* gnu/packages/python-science.scm (python-pyfma): New variable.
Change-Id: I354d3d56f2799c8c9ac9b868fcacbf88dcc5c25d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Felix Gruber | 2023-12-04 | 1 | -0/+25 |
| * | gnu: Add python-meshzoo.•••* gnu/packages/python-science.scm (python-meshzoo): New variable.
Change-Id: Ia41d62ebd6c4cb3c22ebe0668c36279a9ca191ac
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Felix Gruber | 2023-12-04 | 1 | -1/+26 |
| * | gnu: Add python-tdda.•••* gnu/packages/python-science.scm (python-tdda): New variable.
Change-Id: I456aa236b3348e5b990289d8a381c2d5276a12f1
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Troy Figiel | 2023-11-15 | 1 | -0/+33 |
| * | gnu: python-pytensor: Update to 2.17.3.•••* gnu/packages/python-science.scm (python-pytensor): Update to 2.17.3.
Change-Id: I2843aca1df4d43883bf643e6e363bd3700202c45
| Vinicius Monego | 2023-11-03 | 1 | -2/+2 |
| * | gnu: Add python-salib.•••* gnu/packages/python-science.scm (python-salib): New variable.
| Vinicius Monego | 2023-11-03 | 1 | -0/+27 |
| * | gnu: python-trimesh: Update to 3.23.5.•••* gnu/packages/python-science.scm (python-trimesh): Update to 3.23.5.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience | 2023-10-17 | 1 | -2/+2 |
| * | gnu: python-pyvista: Update to 0.42.3.•••* gnu/packages/python-science.scm (python-pyvista): Update to 0.42.3.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience | 2023-10-17 | 1 | -3/+3 |
| * | gnu: python-distributed: Disable failing tests.•••* gnu/packages/python-science.scm (python-distributed): Disable failing tests.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Nicolas Graves | 2023-10-08 | 1 | -2/+4 |
| * | gnu: Add python-numpoly.•••* gnu/packages/python-science.scm (python-numpoly): New variable.
| Vinicius Monego | 2023-09-30 | 1 | -0/+25 |
| * | gnu: python-pytensor: Update to 2.14.2.•••* gnu/packages/python-science.scm (python-pytensor): Update to 2.14.2.
[native-inputs]: Add python-pytest-mock.
| Vinicius Monego | 2023-08-05 | 1 | -3/+6 |
| * | gnu: Add python-scikit-fem.•••* gnu/packages/python-science.scm (python-scikit-fem): New variable.
| Vinicius Monego | 2023-07-29 | 1 | -0/+27 |
| * | gnu: python-distributed: Update to 2023.7.0.•••* gnu/packages/python-science.scm (python-distributed): Update to 2023.7.0.
| Ricardo Wurmus | 2023-07-15 | 1 | -2/+2 |
| * | gnu: Add python-plotnine.•••* gnu/packages/python-science.scm (python-plotnine): New variable.
| Ricardo Wurmus | 2023-07-13 | 1 | -0/+98 |
| * | gnu: python-pandas-flavor: Update to 0.5.0.•••* gnu/packages/python-science.scm (python-pandas-flavor): Update to 0.5.0.
[propagated-inputs]: Add python-lazy-loader and python-packaging.
[home-page]: Update.
| Arun Isaac | 2023-06-29 | 1 | -4/+4 |
| * | gnu: python-distributed: Disable timeout test.•••* gnu/packages/python-science.scm (python-distributed)[arguments]: Disable
test_nanny_timeout, because it times out.
| Ricardo Wurmus | 2023-06-29 | 1 | -0/+3 |
| * | gnu: python-trimesh: Update to 3.22.1.•••* gnu/packages/python-science.scm (python-trimesh): Update to 3.22.1.
[arguments]<#:phases>: Update path in 'fix-build' phase.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience | 2023-06-25 | 1 | -3/+3 |
| * | gnu: Add python-pytensor.•••* gnu/packages/python-science.scm (python-pytensor): New variable.
| Vinicius Monego | 2023-06-25 | 1 | -0/+77 |
| * | gnu: Add python-xarray-einstats.•••* gnu/packages/python-science.scm (python-xarray-einstats): New variable.
| Vinicius Monego | 2023-06-25 | 1 | -0/+24 |
| * | gnu: python-xarray: Update to 2023.6.0.•••* gnu/packages/python-science.scm (python-xarray): Update to 2023.6.0.
[build-system]: Switch to pyproject-build-system.
[arguments]: Do not override the check phase.
| Vinicius Monego | 2023-06-25 | 1 | -10/+4 |
| * | gnu: Add python-einops.•••* gnu/packages/python-science.scm (python-einops): New variable.
| Vinicius Monego | 2023-06-25 | 1 | -0/+34 |
| * | gnu: python-pyvista: Update to 0.39.1.•••* gnu/packages/python-science.scm (python-pyvista): Update to 0.39.1.
[propagated-inputs]: Add python-pooch, remove python-appdirs.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience | 2023-06-20 | 1 | -5/+5 |
| * | gnu: python-distributed: Update to 2023.4.1.•••* gnu/packages/python-science.scm (python-distributed): Update to 2023.4.1.
[source]: Remove snippet.
[arguments]: Update build phase 'versioneer; restore 'sanity-check phase;
simplify custom 'check phase; add 'fix-pytest-config phase; use #:test-flags.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-importlib-metadata.
| Ricardo Wurmus | 2023-05-11 | 1 | -165/+180 |
| * | gnu: python-scikit-optimize: Fix build with newer numpy and sklearn.•••* gnu/packages/patches/python-scikit-optimize-1148.patch,
gnu/packages/patches/python-scikit-optimize-1150.patch: New patches.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/python-science.scm (python-scikit-optimize)[source]: Fetch with
git and apply patches.
| Ricardo Wurmus | 2023-05-10 | 1 | -3/+11 |
| * | gnu: python-bottleneck: Honor #:tests? flag.•••* gnu/packages/python-science.scm (python-bottleneck)[arguments]: Adjust
custom 'check phase to honor the #:tests? flag.
| Efraim Flashner | 2023-05-08 | 1 | -2/+3 |
| * | gnu: python-bottleneck: Update to 1.3.7.•••* gnu/packages/python-science.scm (python-bottleneck): Update to 1.3.7.
| Efraim Flashner | 2023-05-08 | 1 | -4/+4 |
| * | gnu: python-distributed: Fix build.•••* gnu/packages/python-science.scm (python-distributed)[build-system]: Use
pyproject-build-system.
[arguments]: Hide deprecation warnings from tornado, because they break almost
all tests; disable three more tests.
| Ricardo Wurmus | 2023-04-26 | 1 | -1/+12 |
| * | Merge branch 'master' into core-updates.•••Conflicts:
gnu/local.mk
gnu/packages/build-tools.scm
gnu/packages/certs.scm
gnu/packages/check.scm
gnu/packages/compression.scm
gnu/packages/cups.scm
gnu/packages/fontutils.scm
gnu/packages/gnuzilla.scm
gnu/packages/guile.scm
gnu/packages/ibus.scm
gnu/packages/image-processing.scm
gnu/packages/linux.scm
gnu/packages/music.scm
gnu/packages/nss.scm
gnu/packages/pdf.scm
gnu/packages/python-xyz.scm
gnu/packages/qt.scm
gnu/packages/ruby.scm
gnu/packages/shells.scm
gnu/packages/tex.scm
gnu/packages/video.scm
gnu/packages/vulkan.scm
gnu/packages/web.scm
gnu/packages/webkit.scm
gnu/packages/wm.scm
| Maxim Cournoyer | 2023-04-14 | 1 | -45/+120 |
| |\ |
|
| | * | gnu: python-scikit-allel: Use pyproject-build-system.•••* gnu/packages/python-science.scm (python-scikit-allel): Move up to create
alphabetic order.
[build-system]: Use pyproject-build-system.
[arguments]: Provide test flags instead of overriding 'check phase; split out
build step into new 'build-ext phase. Disable roh_mhmm tests.
| Ricardo Wurmus | 2023-03-24 | 1 | -49/+52 |
| | * | gnu: Add python-scikit-optimize.•••* gnu/packages/python-science.scm (python-scikit-optimize): New variable.
| Ricardo Wurmus | 2023-03-24 | 1 | -19/+47 |
| | * | gnu: Add python-libneuroml.•••* gnu/packages/python-science.scm (python-libneuroml): New variable.
| Lars-Dominik Braun | 2023-03-21 | 1 | -1/+26 |
| | * | gnu: Add python-pylems.•••* gnu/packages/python-science.scm (python-pylems): New variable.
| Lars-Dominik Braun | 2023-03-21 | 1 | -0/+20 |
| * | | gnu: python-scipy: Update to 1.10.1.•••* gnu/packages/python-science.scm (python-scipy): Update to 1.10.1.
[build-system]: Use pyproject-build-system.
[arguments]: Add #:build-backend argument.
Remove loosen-requirements, build and install phases.
[native-inputs]: Remove python-pypa-build.
| Maxim Cournoyer | 2023-04-11 | 1 | -21/+11 |
| |/ |
|
