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* gnu: qemu: Fix CVE-2017-{10664,10806,10911,11434}.•••* gnu/packages/patches/qemu-CVE-2017-10664.patch, gnu/packages/patches/qemu-CVE-2017-10806.patch, gnu/packages/patches/qemu-CVE-2017-10911.patch, gnu/packages/patches/qemu-CVE-2017-11434.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/virtualization.scm (qemu)[source]: Use them. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Alex Vong2017-08-134-0/+196
* gnu: curl: Fix i686 test failure.•••* gnu/packages/patches/curl-bounds-check.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/curl.scm (curl-7.55.0)[source]: Use it. Marius Bakke2017-08-131-0/+19
* gnu: catdoc: Fix CVE-2017-11110.•••* gnu/packages/patches/catdoc-CVE-2017-11110.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/textutils.scm (catdoc)[source]: Use it. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Alex Vong2017-08-121-0/+45
* gnu: openjpeg: Update to 2.2.0 [security fixes].•••In addition to the patches we already had (which are not mentioned in the ChangeLog, but verified by following their respective GitHub issues) this release also fixes CVE-2016-9112, CVE-2016-5139, CVE-2016-5152, CVE-2016-5158, CVE-2016-5159, CVE-2016-1626 and CVE-2016-1628. See <https://github.com/uclouvain/openjpeg/blob/v2.2.0/CHANGELOG.md> for details. * gnu/packages/patches/openjpeg-CVE-2016-9572-CVE-2016-9573.patch, gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/image.scm (openjpeg): Update to 2.2.0. [source](patches): Remove. * gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Add phase to patch hard-coded openjpeg-2.1 path. Marius Bakke2017-08-102-478/+0
* gnu: ruby-puma: Update to 3.9.1.•••* gnu/packages/ruby.scm (ruby-puma): Update to 3.9.1. [source]: Remove patch. [arguments]: Disable tests. [native-inputs]: Remove field. * gnu/packages/patches/ruby-puma-ignore-broken-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Ben Woodcroft2017-08-081-13/+0
* gnu: ntfs-3g: Update to 2017.3.23.•••* gnu/packages/linux.scm (ntfs-3g): Update to 2017.3.23. [source]: Remove patch. * gnu/packages/patches/ntfs-3g-CVE-2017-0358.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice2017-08-071-43/+0
* gnu: libtasn1: Fix CVE-2017-10790.•••* gnu/packages/patches/libtasn1-CVE-2017-10790.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/tls.scm (libtasn1/fixed)[source]: Use it. Leo Famulari2017-08-051-0/+63
* gnu: php: Update to 7.1.8.•••* gnu/packages/patches/gd-CVE-2017-7890.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it * gnu/packages/php.scm (php): Update to 7.1.8. Julien Lepiller2017-08-041-0/+30
* gnu: fabric: Update to 1.13.2.•••* gnu/packages/admin.scm (fabric): Update to 1.13.2. Remove outdated comments. [source]: Remove ‘patches’. * gnu/packages/patches/fabric-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice2017-08-041-15/+0
* gnu: glibc@2.22: Fix security issues.•••Fixes CVE-2015-{5180,7547}, CVE-2016-{3075,3706,4429}. * gnu/packages/base.scm (glibc@2.22)[source]: Add patches. * gnu/packages/patches/glibc-CVE-2015-7547.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner2017-08-021-0/+590
* gnu: glibc@2.23: Fix CVE-2015-5180, CVE-2016-{3075,3706,4429}.•••* gnu/packages/base.scm (glibc@2.23)[source]: Add patches. * gnu/packages/patches/glibc-CVE-2016-3075.patch, gnu/packages/patches/glibc-CVE-2016-3706.patch, gnu/packages/patches/glibc-CVE-2016-4429.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. Efraim Flashner2017-08-023-0/+289
* gnu: glibc@2.24: Fix CVE-2015-5180.•••* gnu/packages/base.scm (glibc@2.24)[source]: Add patch. * gnu/packages/patches/glibc-CVE-2015-5180.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner2017-08-021-0/+311
* gnu: guile-ssh: Update to 0.11.2.•••* gnu/packages/ssh.scm (guile-ssh): Update to 0.11.2. [source]: Remove 'patches', 'modules', and 'snippet'. * gnu/packages/patches/guile-ssh-channel-finalization.patch, gnu/packages/patches/guile-ssh-double-free.patch, gnu/packages/patches/guile-ssh-rexec-bug.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove them. Ludovic Courtès2017-08-013-81/+0
* gnu: python-pbr-minimal: Update to 3.0.1•••* gnu/packages/python.scm (python-pbr-minimal): Update to 3.0.1 [source]: Update hash and remove patch. * gnu/packages/patches/python-pbr-fix-man-page-support.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Muriithi Frederick Muriuki2017-08-011-28/+0
* gnu: libgit2: Update to 0.26.0.•••* gnu/packages/version-control.scm (libgit2): Update to 0.26.0. Remove "libgit2-use-after-free.patch". * gnu/packages/patches/libgit2-use-after-free.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it. Ludovic Courtès2017-07-311-24/+0
* gnu: erlang: Fix man-pages search path of 'erl -man'.•••* gnu/packages/patches/erlang-man-path.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/erlang.scm (erlang)[source]: Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Peter Mikkelsen2017-07-291-0/+24
* gnu: nss, nss-certs: Update to 3.32.•••This release includes minor code changes and many certificate updates: <https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSS/NSS_3.32_release_notes> * gnu/packages/certs.scm (nss-certs): Update to 3.32. * gnu/packages/gnuzilla.scm (nss): Update to 3.32. [arguments]: Prevent another test file from being installed. * gnu/packages/patches/nss-pkgconfig.patch: Adjust. Marius Bakke2017-07-281-2/+2
* gnu: evince: Update to 3.24.1.•••* gnu/packages/gnome.scm (evince): Update to 3.24.1. [source]: Remove obsolete patch. * gnu/packages/patches/evince-CVE-2017-1000083.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Kei Kebreau2017-07-251-109/+0
* gnu: perl-dbd-mysql: Fix CVE-2017-10788.•••* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/databases.scm (perl-dbd-mysql)[source]: Use it. Kei Kebreau2017-07-251-0/+62
* gnu: Add guile2.0-bytestructures.•••* gnu/packages/patches/guile-bytestructures-name-clash.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/guile.scm (guile-bytestructures)[source]: Use it. [arguments]: Unpack the source. [native-inputs]: New field. (guile2.0-bytestructures): New variable. Ludovic Courtès2017-07-251-0/+31
* gnu: gnome: Add deja-dup.•••* gnu/packages/gnome.scm (deja-dup): New variable. * gnu/packages/patches/deja-dup-use-ref-keyword-for-iter.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch file entry. Christopher Baines2017-07-241-0/+41
* gnu: metabat: Update to 2.11.1.•••* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.1. [source]: Add patch to fix compilation. [arguments]: Adjust regular expressions modifying 'SConstruct'. * gnu/packages/patches/metabat-fix-compilation.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft2017-07-231-0/+39
* gnu: bcftools: Update to 1.5.•••* gnu/packages/bioinformatics.scm (bcftools): Update to 1.5. [origin]: Remove fix-makefile patch. [arguments]: Add configure flags, add LIBS make flag. Do not delete configure phase. * gnu/packages/patches/bcftools-fix-makefile.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Ben Woodcroft2017-07-231-33/+0
* gnu: bcftools: Update to 1.4.1.•••* gnu/packages/bioinformatics.scm (bcftools): Update to 1.4.1. [arguments]: Move Makefile modifications from here ... [source]: ... to added patch. Adjust patch for update to 1.4. * gnu/packages/patches/bcftools-fix-makefile.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Ben Woodcroft2017-07-231-0/+33
* gnu: quassel: Enable TLS.•••* gnu/packages/patches/quassel-fix-tls-check.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/irc.scm (quassel)[source]: Use it. Signed-off-by: Leo Famulari <leo@famulari.name> Ryan Moe2017-07-221-0/+25
* gnu: Remove python-fake-factory leftovers.•••This is a followup to c799eb2eb8b1a820147af96988eddaa9f752994b. * gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Marius Bakke2017-07-221-36/+0
* gnu: python-pyopenssl: Update to 17.2.0.•••* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0. [native-inputs]: Add PYTHON-FLAKY. [source](patches): Remove. Marius Bakke2017-07-221-36/+0
* gnu: heimdal: Fix CVE-2017-{6594,11103}.•••* gnu/packages/patches/heimdal-CVE-2017-6594.patch, gnu/packages/patches/heimdal-CVE-2017-11103.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/kerberos.scm (heimdal)[source]: Use them. Alex Vong2017-07-202-0/+130
* gnu: Remove a left-over patch.•••This is a followup to commit 426b0b898f70a58133d80779980f163a5761686e. * gnu/packages/patches/pcre-CVE-2017-7186.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Leo Famulari2017-07-201-56/+0
* gnu: Add libusb@0.1.•••* gnu/packages/libusb.scm (libusb-0.1): New variable. * gnu/packages/patches/libusb-0.1-disable-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Jonathan Brielmaier2017-07-201-0/+15
* gnu: qemu: Fix CVE-2017-11334.•••* gnu/packages/patches/qemu-CVE-2017-11334.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/virtualization.scm (qemu)[source]: Use it. Leo Famulari2017-07-171-0/+52
* gnu: chicken: Fix CVE-2017-11343.•••* gnu/packages/patches/chicken-CVE-2017-11343.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/scheme.scm (chicken)[source]: Use it. Leo Famulari2017-07-171-0/+57
* gnu: supertuxkart: Fix build on aarch64.•••* gnu/packages/games.scm (supertuxkart)[source]: Add patch. * gnu/packages/patches/supertuxkart-angelscript-ftbfs.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner2017-07-171-0/+42
* gnu: Add sooperlooper.•••* gnu/packages/patches/sooperlooper-build-with-wx-30.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/music.scm (sooperlooper): New variable. Ricardo Wurmus2017-07-171-0/+179
* gnu: evince: Fix CVE-2017-1000083.•••* gnu/packages/patches/evince-CVE-2017-1000083.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnome.scm (evince)[source]: Use it. Marius Bakke2017-07-131-0/+109
* gnu: spice: Fix CVE-2017-7506.•••* gnu/packages/patches/spice-CVE-2017-7506.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/spice.scm (spice)[source]: Use it. Leo Famulari2017-07-121-0/+158
* gnu: hop: Update to 3.1.0-pre2.•••* gnu/packages/scheme.scm (hop): Update to 3.1.0-pre2. [source]: Remove unnecessary patch. [arguments]: Enable tests; disable parallel building; specify BIGLOO in make-flags. [inputs]: Add libgc, libunistring, libuv, pcre and sqlite. * gnu/local.mk (dist_patch_DATA): Remove unnecessary patch. * gnu/packages/patches/hop-linker-flags.patch: Delete file. Kei Kebreau2017-07-101-60/+0
* gnu: bigloo: Update to 4.3a.•••* gnu/packages/scheme.scm (bigloo): Update to 4.3a. [source]: Remove old patch. Add snippet. [arguments]: Adjust the build phases accordingly. [inputs]: Add libgc, libunistring, libuv, openssl, pcre and sqlite. Kei Kebreau2017-07-101-18/+0
* gnu: libtiff: Fix two integer overflows.•••* gnu/packages/patches/libtiff-tiffycbcrtorgb-integer-overflow.patch, gnu/packages/patches/libtiff-tiffycbcrtorgbinit-integer-overflow.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them. Leo Famulari2017-07-102-0/+100
* gnu: ncurses: Fix CVE-2017-10684 and CVE-2017-10685.•••* gnu/packages/patches/ncurses-CVE-2017-10684-10685.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/ncurses.scm (ncurses)[replacement]: New field. (ncurses/fixed): New variable. Leo Famulari2017-07-101-0/+200
* gnu: poppler: Fix null pointer dereferences.•••* gnu/packages/patches/poppler-fix-crash-with-broken-documents.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (poppler/fixed)[source]: Add the patch. Mark H Weaver2017-07-101-0/+61
* gnu: dblatex: Use texlive-union.•••* gnu/packages/patches/dblatex-remove-multirow.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/docbook.scm (dblatex)[source]: Use patch. [inputs]: Replace "texlive" with a texlive-union. Ricardo Wurmus2017-07-091-0/+30
* gnu: poppler: Use an ABI-compatible replacement to fix CVE-2017-9776.•••This is a followup to commit 95bbaa02aa63bc5eae36f686f1ed9915663aa4cf. See <https://bugs.gnu.org/27621> for more information. Poppler 0.56.0's ABI is not compatible with Poppler 0.52.0, so it's not possible to graft the newer version in place of the older one. This change leaves CVE-2017-9775 unfixed for now. * gnu/packages/patches/poppler-CVE-2017-9776.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pdf.scm (poppler-0.56.0): Replace with ... (poppler/fixed): ... new variable. (poppler)[replacement]: Replaced with poppler/fixed. Leo Famulari2017-07-091-0/+34
* gnu: blast+: Update to 2.6.0.•••* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0. [origin]: Remove bundled pcre. Add patch. [arguments]: Replace paths in run_with_lock.c. Configure with pcre. [inputs]: Add pcre, perl, python. * gnu/packages/patches/blast+-fix-makefile.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft2017-07-081-0/+15
* gnu: python-pyopenssl: Fix test failure on 32-bit platforms.•••* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pyopenssl)[source]: Use it. Marius Bakke2017-07-071-0/+36
* gnu: libtiff: Fix CVE-2017-{9936,10688}.•••* gnu/packages/patches/libtiff-CVE-2017-9936.patch, gnu/packages/patches/libtiff-CVE-2017-10688.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them. Signed-off-by: Leo Famulari <leo@famulari.name> Alex Vong2017-07-072-0/+139
* gnu: xorg-server: Fix CVE-2017-{10971,10972}.•••* gnu/packages/patches/xorg-server-CVE-2017-10971.patch, gnu/packages/patches/xorg-server-CVE-2017-10972.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xorg.scm (xorg-server)[source]: Use them. Signed-off-by: Leo Famulari <leo@famulari.name> Kei Kebreau2017-07-062-0/+188
* gnu: gemma: Fix building on non-Intel architectures.•••* gnu/packages/patches/gemma-intel-compat.patch: New file. * gnu/packages/bioinformatics.scm (gemma)[source]: Add patch. [arguments]: Add NO_INTEL_COMPAT flag on non-Intel architectures. * gnu/local.mk (dist_patch_DATA): Register patch. Efraim Flashner2017-07-041-0/+44
* gnu: gajim: Update to 0.16.8.•••* gnu/packages/messaging.scm (gajim): Update to 0.16.8. [source]: Remove patch. * gnu/packages/patches/gajim-CVE-2016-10376.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Arun Isaac2017-07-041-57/+0
* gnu: python-pyopenssl: Update to 17.1.0.•••* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.1.0. [source]: Remove patch. [native-inputs]: Add PYTHON-PRETEND. [arguments]<#:phases>: Disable the network test here instead of via a patch. Also disable one new test. * gnu/packages/patches/python-pyopenssl-skip-network-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Marius Bakke2017-07-041-43/+0