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* gnu: glpk: Update to 4.61.•••* gnu/packages/maths.scm (glpk): Update to 4.61. [home-page]: Use HTTPS. Marius Bakke2017-01-231-3/+3
* gnu: hdf4: Update to 4.2.12.•••* gnu/packages/maths.scm (hdf4): Update to 4.2.12. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2017-01-091-2/+2
* gnu: r-rcpparmadillo: Update to 0.7.600.1.0.•••* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.600.1.0. * gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.600.1. Ricardo Wurmus2016-12-291-2/+2
* gnu: armadillo: Update to 7.600.2.•••* gnu/packages/maths.scm (armadillo): Update to 7.600.2. Ricardo Wurmus2016-12-291-2/+2
* gnu: netcdf: Enable HDF4 support.•••* gnu/packages/maths.scm (netcdf)[inputs]: Add hdf4-alt and libjpeg. [arguments]: Add "--enable-hdf4" configure flag. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Thomas Danckaert2016-12-241-3/+5
* gnu: gnuplot: Update to 5.0.5.•••* gnu/packages/maths.scm (gnuplot): Update to 5.0.5. Kei Kebreau2016-12-181-30/+25
* gnu: wxmaxima: Update to 16.12.0.•••* gnu/packages/maths.scm (wxmaxima): Update to 16.12.0. Kei Kebreau2016-12-181-2/+2
* gnu: maxima: Update to 5.39.0.•••* gnu/packages/maths.scm (maxima): Update to 5.39.0. Kei Kebreau2016-12-181-2/+2
* gnu: gsl: Update to 2.3.•••* gnu/packages/maths.scm (gsl): Update to 2.3. Tobias Geerinckx-Rice2016-12-121-2/+2
* gnu: gmsh: Update to 2.15.0.•••* gnu/packages/maths.scm (gmsh): Update to 2.15.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Paul Garlick2016-12-091-2/+2
* gnu: netcdf: Upgrade to 4.4.1.1.•••* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to 4.4.1.1. [source]: Adjust patch name, add netcdf-tst_h_par.patch * gnu/packages/patches/netcdf-config.date.patch: Rename to... * gnu/packages/patches/netcdf-date-time.patch: ...this. Adjust for latest source. * gnu/packages/patches/netcdf-tst_h_par.patch: New patch. * gnu/local.mk (dist_patch_DATA): Adjust patches. Eric Bavier2016-12-011-3/+4
* gnu: hdf5: Update to 1.8.18 [fixes CVE-2016-{4330,4331,4332,4333}].•••* gnu/packages/maths.scm (hdf5): Update to 1.8.18. [source]: Add alternate URL. Leo Famulari2016-11-301-5/+10
* gnu: hdf5: Build the C++ interface.•••* gnu/packages/maths.scm (hdf5)[arguments]: Add #:configure-flags. Ludovic Courtès2016-11-241-1/+4
* gnu: Remove redundancy where mkdir-p <dir> is followed by install-file <file>...•••* gnu/packages/bioinformatics.scm (bwa)[arguments]: Remove redundant mkdir-p. (eigensoft)[arguments]: Likewise. (snap-aligner)[arguments]: Likewise. (pardre)[arguments]: Likewise. (piranha)[arguments]: Likewise. * gnu/packages/maths.scm (hypre)[arguments]: Likewise. * gnu/packages/mp3.scm (mpc123)[arguments]: Likewise. * gnu/packages/music.scm (tuxguitar)[arguments]: Likewise. * gnu/packages/pdf.scm (impressive)[arguments]: Likewise. * gnu/packages/qemu.scm (qemu)[arguments]: Likewise. Signed-off-by: Leo Famulari <leo@famulari.name> Petter2016-11-211-1/+0
* gnu: octave: Update to 4.2.0.•••* gnu/packages/maths.scm (octave): Update to 4.2.0. [native-inputs]: Add lzip. [home-page]: Use https. Efraim Flashner2016-11-151-5/+6
* Merge branch 'core-updates'Ludovic Courtès2016-11-131-3/+3
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| * Merge branch 'master' into core-updatesMark H Weaver2016-11-061-3/+4
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| * \ Merge branch 'master' into core-updatesLeo Famulari2016-10-291-17/+14
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| * \ \ Merge branch 'master' into core-updatesLeo Famulari2016-10-261-5/+81
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| * \ \ \ Merge branch 'master' into core-updatesMark H Weaver2016-10-191-1/+2
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| * \ \ \ \ Merge branch 'master' into core-updatesMark H Weaver2016-10-131-0/+59
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| * \ \ \ \ \ Merge branch 'master' into core-updatesMark H Weaver2016-10-121-0/+37
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| * \ \ \ \ \ \ Merge branch 'master' into core-updatesLeo Famulari2016-10-051-10/+44
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| * \ \ \ \ \ \ \ Merge branch 'master' into core-updatesLudovic Courtès2016-09-301-5/+56
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| * | | | | | | | | gnu: Add and use gettext-minimal.•••* gnu/packages/gettext.scm (gnu-gettext): Rename to... (gettext-minimal): ... this. Adjust synopsis and description. (gnu-gettext): Inherit from it. (po4a): Use 'gettext-minimal' instead of 'gnu-gettext'. * gnu/packages/acl.scm: Likewise. * gnu/packages/admin.scm: Likewise. * gnu/packages/apl.scm: Likewise. * gnu/packages/attr.scm: Likewise. * gnu/packages/audio.scm: Likewise. * gnu/packages/base.scm: Likewise. * gnu/packages/cdrom.scm: Likewise. * gnu/packages/commencement.scm: Likewise. * gnu/packages/crypto.scm: Likewise. * gnu/packages/databases.scm: Likewise. * gnu/packages/disk.scm: Likewise. * gnu/packages/documentation.scm: Likewise. * gnu/packages/education.scm: Likewise. * gnu/packages/engineering.scm: Likewise. * gnu/packages/enlightenment.scm: Likewise. * gnu/packages/fcitx.scm: Likewise. * gnu/packages/fontutils.scm: Likewise. * gnu/packages/freedesktop.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/gkrellm.scm: Likewise. * gnu/packages/glib.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/grub.scm: Likewise. * gnu/packages/gtk.scm: Likewise. * gnu/packages/guile.scm: Likewise. * gnu/packages/ibus.scm: Likewise. * gnu/packages/irc.scm: Likewise. * gnu/packages/iso-codes.scm: Likewise. * gnu/packages/kde-frameworks.scm: Likewise. * gnu/packages/kodi.scm: Likewise. * gnu/packages/linux.scm: Likewise. * gnu/packages/man.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/mono.scm: Likewise. * gnu/packages/mp3.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/nano.scm: Likewise. * gnu/packages/networking.scm: Likewise. * gnu/packages/package-management.scm: Likewise. * gnu/packages/pdf.scm: Likewise. * gnu/packages/sawfish.scm: Likewise. * gnu/packages/statistics.scm: Likewise. * gnu/packages/terminals.scm: Likewise. * gnu/packages/version-control.scm: Likewise. * gnu/packages/vpn.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/webkit.scm: Likewise. * gnu/packages/wicd.scm: Likewise. * gnu/packages/wine.scm: Likewise. * gnu/packages/xdisorg.scm: Likewise. * gnu/packages/xorg.scm: Likewise. Alex Kost2016-09-281-1/+1
| * | | | | | | | | gnu: openblas: Update to 0.2.19.•••* gnu/packages/maths.scm (openblas): Update to 0.2.19. Leo Famulari2016-09-131-2/+2
| * | | | | | | | | Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner2016-08-291-57/+49
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| * | | | | | | | | | gnu: openblas: Update to 0.2.18.•••* gnu/packages/maths.scm (openblas): Update to 0.2.18. Ricardo Wurmus2016-08-141-2/+2
* | | | | | | | | | | gnu: gmsh: Update to 2.14.1•••* gnu/packages/maths.scm (gmsh): Update to 2.14.1. [source]: Use new uri. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Paul Garlick2016-11-101-3/+3
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* | | | | | | | | | gnu: maxima: Update to 5.38.1.•••* gnu/packages/maths.scm (maxima): Update to 5.38.1. Kei Kebreau2016-11-031-3/+4
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* | | | | | | | | gnu: mumps: Upgrade to 5.0.2.•••* gnu/packages/maths.scm (mumps): Upgrade to 5.0.2. [arguments]: Properly return boolean from install phase. Eric Bavier2016-10-281-17/+14
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* | | | | | | | gnu: r-rcpparmadillo: Update to 0.7.500.0.0.•••* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.500.0. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0. Ricardo Wurmus2016-10-261-2/+2
* | | | | | | | gnu: armadillo: Update to 7.500.0.•••* gnu/packages/maths.scm (armadillo): Update to 7.500.0. Ricardo Wurmus2016-10-261-3/+3
* | | | | | | | gnu: coda: Remove bundled libraries.•••* gnu/packages/maths.scm (coda): Remove bundled libraries. [source]: Add patch and snippet to remove bundled zlib, pcre and expat. [inputs]: Add system zlib, pcre and expat. * gnu/packages/patches/coda-use-system-libs.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-10-251-2/+12
* | | | | | | | gnu: Add coda.•••* gnu/packages/maths.scm (coda): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-10-241-0/+31
* | | | | | | | gnu: Add hdf-eos2.•••* gnu/packages/maths.scm (hdf-eos2): New variable. * gnu/packages/patches/hdf-eos2-build-shared.patch: New file. * gnu/packages/patches/hdf-eos2-remove-gctp.patch: New file. * gnu/packages/patches/hdf-eos2-fortrantests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-10-241-0/+35
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* | | | | | | gnu: hdf4: Really fix non-x86 architectures.•••This is a follow-up to commit 60da9fb1100787c49ed4910eacf50e83c6462dcc. * gnu/local.mk (dist_patch_DATA): Register patch. * gnu/packages/maths.scm (hdf4)[source]: Add patch. Andreas Enge2016-10-181-1/+2
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* | | | | | gnu: Add hdf4•••* gnu/packages/maths.scm (hdf4, hdf4-alt): New variables. * gnu/packages/patches/hdf4-reproducibility.patch: New file. * gnu/packages/patches/hdf4-shared-fortran.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Co-Authored-By: Jeremy Robst <jpro@bas.ac.uk> Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-10-121-0/+59
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* | | | | gnu: Add hdf-eos5.•••* gnu/packages/maths.scm (hdf-eos5): New variable. * gnu/packages/patches/hdf-eos5-build-shared.patch: New file. * gnu/packages/patches/hdf-eos5-remove-gctp.patch: New file. * gnu/packages/patches/hdf-eos5-fix-szip.patch: New file. * gnu/packages/patches/hdf-eos5-fortrantests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-10-061-0/+37
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* | | | gnu: Add Vc.•••* gnu/packages/maths.scm (vc): New variable. Leo Famulari2016-10-051-0/+34
* | | | gnu: gsl: Disable failing tests on i686.•••* gnu/packages/patches/gsl-test-i686.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/maths.scm (gsl)[source](patches): New field. Ludovic Courtès2016-10-051-8/+8
* | | | gnu: gsl: Update to 2.2.1.•••* gnu/packages/maths.scm (gsl): Update to 2.2.1. Ludovic Courtès2016-10-041-2/+2
* | | | gnu: gctp: 'license' field now has a <license> value.•••* gnu/packages/maths.scm (gctp)[license]: Change to a <license> record. Ludovic Courtès2016-10-031-1/+1
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* | | gnu: Add gctp.•••* gnu/packages/maths.scm (gctp): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Thomas Danckaert2016-09-271-0/+26
* | | gnu: openlibm: Remove support for mips.•••* gnu/packages/maths.scm (openlibm)[supported-systems]: New field, remove support for mips64el. Efraim Flashner2016-09-211-0/+2
* | | gnu: r-rcpparmadillo: Update to 0.7.400.2.0.•••* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.400.2. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.400.2.0. Ricardo Wurmus2016-09-121-3/+3
* | | gnu: r-pracma: Update to 1.9.5.•••* gnu/packages/maths.scm (r-pracma): Update to 1.9.5. [propagated-inputs]: Add "r-quadprog". Ricardo Wurmus2016-09-121-2/+4
* | | gnu: Add r-quadprog.•••* gnu/packages/maths.scm (r-quadprog): New variable. Ricardo Wurmus2016-09-121-0/+21
* | | Revert "gnu: gsl: Update to 2.2."•••This reverts commit b16b16e6c2ba9780ebdf936c325e06ebcc0a950b. Rationale: gsl-2.2 consistently fails its test suite on i686. Inkscape depends on gsl, and the grub background image is converted using inkscape, so i686 systems can no longer be built. Mark H Weaver2016-09-011-2/+2
* | | gnu: gsl: Update to 2.2.•••* gnu/packages/maths.scm (gsl): Update to 2.2. Efraim Flashner2016-08-301-2/+2
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