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* gnu: armadillo: Enable LAPACK support.•••* gnu/packages/maths.scm (armadillo)[arguments]: Add OPENBLAS_PROVIDES_LAPACK option to 'configure-flags'. Change-Id: I872520620c921d0ab1fef8f6e5812da12cee031b Guillaume Le Vaillant2024-04-181-2/+4
* gnu: superlu-dist: Fix linking with the ParMETIS shim of pt-scotch.•••* gnu/packages/maths.scm (superlu-dist)[arguments]: Adjust library names to match current ‘scotch’. Change-Id: If64094c058cc3be58435fe1c47cc99fb0a9e1fff Ludovic Courtès2024-04-111-2/+2
* gnu: pt-scotch: Include <stdint.h> so ‘parmetis.h’ is usable.•••Fixes a bug when building ‘superlu-dist’ where ‘int32_t’ would be undefined. * gnu/packages/maths.scm (scotch)[source]: Add ‘snippet’. Change-Id: Id5beb2034d762727458821b93568e5b733184c00 Ludovic Courtès2024-04-111-2/+9
* gnu: octave-cli: Update to 9.1.0.•••* gnu/packages/maths.scm (octave-cli): Update to 9.1.0. Change-Id: I8b8c3245644e0958d13d635f514d7fcc1d656a91 Signed-off-by: Christopher Baines <mail@cbaines.net> Andy Tai2024-04-071-2/+2
* gnu: libflame: Switch to openblas.•••* gnu/packages/maths.scm (libflame): Switch input dependency from lapack to openblas. Change-Id: I7abdb8d126856488b0722b73c336309bf5c2234d Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-3/+3
* gnu: python-cvxopt: Remove dependency on lapack.•••* gnu/packages/maths.scm (python-cvxopt): Remove dependency on lapack. Change-Id: I2a28ecf1ab5ea7683d6b8adf72054d3f86892771 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: scilab: Remove dependency on lapack.•••* gnu/packages/maths.scm (scilab): Remove dependency on lapack. Change-Id: I5c825c9e6eee6f7fbde078c67d3208fcadf100b6 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+0
* gnu: bonmin: Switch to openblas.•••* gnu/packages/maths.scm (bonmin): Switch input dependency from lapack to openblas. Change-Id: I3f1ef50827873fdc1eddcd152a74ffbbbf02ee44 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: superlu-dist: Remove dependency on lapack.•••* gnu/packages/maths.scm (superlu-dist): Remove dependency on lapack. Change-Id: I5893e16f7ef6fd688fd6b53eba6d3005b832f0ef Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-2/+1
* gnu: elemental: Remove dependency on lapack.•••* gnu/packages/maths.scm (elemental): Remove dependency on lapack. Change-Id: Iad28ceb70b87a26de75feec631b40aeedf977b53 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+0
* gnu: dealii: Remove dependency on lapack.•••* gnu/packages/maths.scm (dealii): Remove dependency on lapack. Change-Id: I6f3439c886a574b8a8d2d91a4afa04ed09daba7f Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+0
* gnu: p4est: Remove dependency on lapack.•••* gnu/packages/maths.scm (p4est): Remove dependency on lapack. Change-Id: I9c76f8b9ba3fc7d5feabfb059505f66ac50972c3 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-3/+2
* gnu: sundials-julia: Switch to openblas.•••* gnu/packages/maths.scm (sundials-julia): Switch input dependency from lapack to openblas. Change-Id: I7c5990b09f3a006600bab73ef998b081cbaa8935 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: ceres: Remove dependency on lapack.•••* gnu/packages/maths.scm (ceres): Remove dependency to lapack. Change-Id: Iac55faf30a83bbbe3693cac73a9996af8ddcbde7 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: ipopt: Switch to openblas.•••* gnu/packages/maths.scm (ipopt): Switch input dependency from lapack to openblas and add required configure flags. Change-Id: I58b84f0741a973adf81da1716e2e2659af1c50c4 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-3/+4
* gnu: gmsh: Switch to openblas.•••* gnu/packages/maths.scm (gmsh): Switch input dependency from lapack to openblas. Change-Id: Ib04c07a51f3af65d259b9970073ec1f68603aed4 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: itpp: Switch to openblas.•••* gnu/packages/maths.scm (itpp): Switch input dependency from lapack to openblas. Change-Id: I42606d5ed379093a076790d2b300dfa96f18d2ea Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: hypre: Switch to openblas.•••* gnu/packages/maths.scm (hypre): Switch input dependency from lapack to openblas. Change-Id: I8bc2c3abf0d3ead52c9616e1a23bf4ac6113ac3b Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: scalapack: Switch to openblas.•••* gnu/packages/maths.scm (scalapack): Switch input dependency from lapack to openblas. Change-Id: Ie025e6ced66c75755314b53989547ffe26fbcd11 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: octave-cli: Switch to openblas.•••* gnu/packages/maths.scm (octave-cli): Switch input dependency from lapack to openblas. Change-Id: I3a624a44c1c9bc6be7360cfecbb61c955fa0d209 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: armadillo: Switch to openblas.•••* gnu/packages/maths.scm (armadillo): Switch inputs from lapack to openblas. Change-Id: I718371f2e95fafc31e5dccddccbc223c111f594d Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* gnu: arpack-ng: Switch to openblas.•••* gnu/packages/maths.scm (arpack-ng): Switch inputs from lapack to openblas. Change-Id: I0d825373f0f267cc97748a9c2c7de1d73698354e Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-04-041-1/+1
* Merge remote-tracking branch 'savannah/master' into gnome-team•••Change-Id: Iec8e15b79c6fde516294c2bfcaf8ee3575b1f745 Christopher Baines2024-03-201-0/+6
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| * gnu: combinatorial-blas: Skip failing tests.•••* gnu/packages/maths.scm (combinatorial-blas): Add new phase. Change-Id: Ifefb2b17e6758547d38290753a7cd338032a6abb Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-03-191-0/+6
* | Merge remote-tracking branch 'savannah/master' into gnome-team•••Change-Id: I775274c2693536e2efa36c9abca4c54c5c458e26 Christopher Baines2024-03-161-12/+18
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| * gnu: combinatorial-blas: Update source hash.•••Diffoscope shows there are changes, but they don't look significant. * gnu/packages/maths.scm (combinatorial-blas): Update source hash. Change-Id: I32db6df0ef7c652572b1e874fe22175a4b66af6e Christopher Baines2024-03-141-1/+1
| * gnu: hypre: Honor the #:tests? flag.•••* gnu/packages/maths.scm (hypre)[arguments]: Adjust 'check phase to honor the #:tests? flag. Change-Id: I475fabd7d9f73ed320b97a4767830d82190c2b15 Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Lars Bilke2024-03-121-10/+15
| * gnu: petsc: Add tunable property.•••Tested with some real-world simulations on multpiple HPC systems. * gnu/packages/maths.scm (petsc)[properties]: Add tunable? flag. Change-Id: I81588d0556c4176f29d7ab760322cd7aec271f12 Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Lars Bilke2024-03-121-1/+2
* | Merge branch 'master' into gnome-teamLiliana Marie Prikler2024-03-101-5/+5
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| * gnu: nauty: Update to 2.8.8.•••* gnu/packages/maths.scm (nauty): Update to 2.8.8. Change-Id: I741b398e7ab367a7c82ee8cc454f1790524b5db6 Nicolas Goaziou2024-03-081-3/+3
| * gnu: units: Update to 2.23.•••* gnu/packages/maths.scm (units): Update to 2.23. Change-Id: Ia1b3df68c125631255cb3d28d2bf55d3148ee462 Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Andy Tai2024-03-041-2/+2
* | Merge branch 'master' into gnome-teamLiliana Marie Prikler2024-03-021-2/+14
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| * gnu: giza: Update to 1.4.1.•••* gnu/packages/maths.scm (giza): Update to 1.4.1. Change-Id: I7e6087e22cc6dea4a680fa45db155e42a724b50d Sharlatan Hellseher2024-02-271-2/+2
| * gnu: petsc: Reduce closure size.•••Reduces closure size from 828 MiB to 463 MiB (44%) by removing references to build dependencies such as GCC. * gnu/packages/maths.scm (petsc)[arguments]: Add ‘clear-reference-to-compiler’ phase. In ‘clean-install’ phase, also remove “configure-hash”. Change-Id: I2e6900747b2118546f0a39ceb109b3f2f90e6949 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Lars Bilke2024-02-271-0/+12
* | Merge branch 'master' into gnome-teamLiliana Marie Prikler2024-02-251-3/+4
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| * gnu: arpack-ng: Update to 3.9.1.•••* gnu/packages/maths.scm (arpack-ng): Update to 3.9.1. Drop patch. * gnu/packages/patches/arpack-ng-propagate-rng-state.patch: Remove file. * gnu/packages/maths.scm (dist_patch_DATA): Unregister patch. Change-Id: I33a666c3a88fb2f6791c8d698eeb054a831103fc Andreas Enge2024-02-141-3/+2
| * gnu: arpack-ng: Add preprocessor flag.•••* gnu/packages/maths.scm (arpack-ng): Add configure flag for building ISO C binding headers. Change-Id: Iddfd67094ffafc3cabd88353e3839e5e903b804a Signed-off-by: Andreas Enge <andreas@enge.fr> Romain GARBAGE2024-02-141-0/+2
* | Merge branch 'master' into gnome-teamLiliana Marie Prikler2024-02-131-25/+29
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| * gnu: frama-c: Update to 27.1.•••* gnu/packages/maths.scm (frama-c): Update to 27.1. (why3): Update to 1.6.0. Change-Id: I74191e4274d58a88a772413875fbf7de4d243fec Julien Lepiller2024-02-081-25/+29
* | Merge branch 'master' into gnome-teamLiliana Marie Prikler2024-02-031-4/+6
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| * gnu: python-kiwisolver: Update to 1.4.5.•••* gnu/packages/maths.scm (python-kiwisolver): Update to 1.4.5. [build-system]: Use pyproject-build-system. [propagated-inputs]: Add python-typing-extension. [native-inputs]: Add python-cppy, python-pytest, and python-setuptools-scm. Change-Id: Iea75440dc58fa342dcf4a2a381b6dcc17e71e618 Ricardo Wurmus2024-01-161-4/+6
* | Merge branch 'master' into gnome-teamLiliana Marie Prikler2024-01-011-2/+2
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| * gnu: scotch: Update to 7.0.4•••* gnu/packages/maths.scm (scotch): Update to version 7.0.4. Change-Id: I493113ecc1694e8812fb38d8e4641398eb174b34 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Romain GARBAGE2023-12-251-2/+2
* | Merge branch 'master' into gnome-teamLiliana Marie Prikler2023-12-201-4/+148
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| * gnu: wxmaxima: Update to 23.11.0•••* gnu/packages/maths.scm (wxmaxima): Update to 23.11.0 Change-Id: Ifd1d705ec21f8f437eeb6364dea7d51638567eb7 Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Andy Tai2023-12-051-2/+2
| * gnu: Add python-quadpy.•••* gnu/packages/maths.scm (python-quadpy): New variable. Change-Id: Icb5a60920465bc5861cf32ffe5dc44a9088af890 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber2023-12-041-0/+36
| * gnu: Add python-orthopy.•••* gnu/packages/maths.scm (python-orthopy): New variable. Change-Id: I75e528f30d285666b8012a9cbc5cbb7e28aaf764 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber2023-12-041-0/+42
| * gnu: Add python-ndim.•••* gnu/packages/maths.scm (python-ndim): New variable. Change-Id: I543f1f5e195f4f2fd5bd70f9ce29ec750a24439b Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber2023-12-041-0/+25
| * gnu: Add python-accupy.•••* gnu/packages/maths.scm (python-accupy): New variable. * gnu/packages/patches/python-accupy-fix-use-of-perfplot.patch: New file. * gnu/packages/patches/python-accupy-use-matplotx.patch: New file. * gnu/local.mk (dist_patch_DATA): Add new patch files. Change-Id: I0222665d54a36830844b3b33e3dcb546741cfaa1 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber2023-12-041-0/+41
| * gnu: octave: Update to 8.4.0•••* gnu/packages/maths.scm (octave-cli): Update to 8.4.0 Change-Id: I88fe31a25a3fbfc28985f5f0b51cb042369f4462 Signed-off-by: Eric Bavier <bavier@posteo.net> Andy Tai2023-12-041-2/+2