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* Merge branch 'staging'Marius Bakke2019-12-041-16/+41
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| * Merge branch 'master' into stagingMarius Bakke2019-11-281-0/+90
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| * \ Merge branch 'master' into stagingMarius Bakke2019-11-151-2/+2
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| * \ \ Merge branch 'master' into stagingMarius Bakke2019-10-301-1/+1
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| * \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-231-1/+72
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| * \ \ \ \ Merge branch 'master' into stagingMarius Bakke2019-10-181-16/+10
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| * | | | | | gnu: mariadb: Split into out, lib and dev.•••* gnu/packages/databases.scm (mariadb): Split into out, lib and dev. (perl-dbd-mysql, python-mysqlclient): Adjust dependencies. * gnu/packages/bioinformatics.scm (kentutils): Adjust dependencies. * gnu/packages/cran.scm (r-rmysql): Adjust dependencies. * gnu/packages/emacs-xyz.scm (emacs-emacsql): Adjust dependencies. * gnu/packages/kodi.scm (kodi): Adjust dependencies. * gnu/packages/qt.scm (qt, qtbase): Adjust dependencies. * gnu/packages/ruby.scm (ruby-mysql2): Adjust dependencies. Julien Lepiller2019-10-121-16/+41
* | | | | | | gnu: python-pandas: Move to (gnu packages python-science).•••* gnu/packages/python-xyz.scm (python-pandas, python2-pandas): Move from here... * gnu/packages/python-science.scm (python-pandas, python2-pandas): ...to here. * gnu/packages/benchmark.scm, gnu/packages/databases.scm, gnu/packages/graph.scm, gnu/packages/parallel.scm, gnu/packages/serialization.scm: Import (gnu packages python-science). Ricardo Wurmus2019-12-041-0/+1
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* | | | | | gnu: Add libdbi-drivers.•••* gnu/packages/databases.scm (libdbi-drivers): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Guillaume Le Vaillant2019-11-261-0/+68
* | | | | | gnu: Add libdbi.•••* gnu/packages/databases.scm (libdbi): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Guillaume Le Vaillant2019-11-261-0/+22
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* | | | | databases: Fix build of virtuoso-ose.•••Virtuoso cannot be built with versions of OpenSSL >1.1.0. * gnu/packages/databases.scm (virtuoso-ose)[inputs]: Change OPENSSL to OPENSSL-1.0. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Roel Janssen2019-11-031-1/+1
* | | | | gnu: leveldb: Update home page.•••* gnu/packages/databases.scm (leveldb)[home-page]: Update. Tobias Geerinckx-Rice2019-11-011-1/+1
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* | | | gnu: Go standard library 'x' packages: Consolidate.•••* gnu/packages/golang.scm (go-golang-org-x-text, go-golang-org-x-sys, go-golang-org-x-net, go-golang-org-x-time): New variables. (go-golang.org-x-crypto-ssh-terminal, go-golang-org-x-crypto-bcrypt, go-golang-org-x-crypto-blowfish, go-golang-org-x-crypto-pbkdf2, go-golang-org-x-crypto-tea, go-golang-org-x-crypto-salsa20, go-golang-org-x-crypto-cast5, go-golang-org-x-crypto-twofish, go-golang-org-x-crypto-xtea, go-golang-org-x-crypto-ed25519, go-golang-org-x-crypto-ripemd160, go-golang-org-x-crypto-blake2s, go-golang-org-x-crypto-sha3, go-golang-org-x-text-encoding, go-golang-org-x-text-transform, go-golang-org-x-text-unicode-norm, go-golang-org-x-net-ipv4, go-golang-org-x-net-bpf, go-golang-org-x-net-context, go-golang-org-x-net-internal-socks, go-golang-org-x-net-internal-socket, go-golang-org-x-net-internal-iana, go-golang-org-x-net-ipv6, go-golang-org-x-net-proxy, go-golang-org-x-sys-cpu, go-golang-org-x-sys-unix, go-golang-org-x-time-rate): Remove variables. (go-github-com-sirupsen-logrus, go-github-com-docker-distribution, go-github-com-libp2p-go-libp2p-crypto, go-github-com-multiformats-go-multihash, go-github-com-libp2p-go-libp2p-peer, go-github-com-libp2p-go-libp2p-metrics, go-github-com-multiformats-go-multiaddr, go-github-com-multiformats-go-multiaddr-net, go-github-com-mattn-go-isatty, go-github-com-gdamore-encoding, go-github-com-gdamore-tcell): Adjust accordingly. * gnu/packages/docker.scm (docker-libnetwork-cmd-proxy): Likewise. * gnu/packages/databases.scm (mongo-tools): Likewise. * gnu/packages/ipfs.scm (go-github-com-ipfs-go-ipfs-api, gx, gx-go): Likewise. * gnu/packages/web.scm (poussetaches): Likewise. * gnu/packages/terminals.scm (go-github-com-junegunn-fzf, go-github.com-howeyc-gopass): Likewise. (go-golang.org-x-crypto-ssh-terminal): Remove variable. * gnu/packages/syncthing.scm (syncthing, go-github-com-oschwald-geoip2-golang, go-github-com-oschwald-maxminddb-golang, go-github-com-syncthing-notify): Adjust accordingly. * gnu/packages/linux.scm (go-netlink): Likewise. Leo Famulari2019-10-291-1/+1
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* | | gnu: mongodb: Fix build.•••* gnu/packages/databases.scm (mongodb)[inputs]: Use openssl 1, as 1.1. doesn't work. [arguments]: Change how a constant is defined in the tests to allow compiling with a newer version of GCC. Christopher Baines2019-10-221-1/+10
* | | gnu: Add ephemeralpg.•••This is a general utility, but I'm particularly interested in using this to enable build time tests for the guix-data-service package. * gnu/packages/databases.scm (ephemeralpg): New variable. Christopher Baines2019-10-211-0/+62
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* | gnu: python-pylibmc: Update to 1.6.1.•••* gnu/packages/databases.scm (python-pylibmc): Update to 1.6.1. Tobias Geerinckx-Rice2019-10-161-7/+4
* | gnu: python-crate: Update to 0.23.2.•••* gnu/packages/databases.scm (python-crate): Update to 0.23.2. Tobias Geerinckx-Rice2019-10-151-2/+2
* | gnu: sqitch: Remove perl-file-homedir input.•••* gnu/packages/databases.scm (perl-file-homedir)[inputs]: Remove perl-file-homedir. Tobias Geerinckx-Rice2019-10-141-1/+0
* | gnu: sqitch: Update to 1.0.0.•••* gnu/packages/databases.scm (sqitch): Update to 1.0.0. Tobias Geerinckx-Rice2019-10-141-6/+4
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* gnu: mariadb: Build with GCC 5 on ARMv7.•••Fixes <https://bugs.gnu.org/37605>. * gnu/packages/databases.scm (mariadb)[native-inputs]: Add GCC-5 when the current system is ARMv7. Marius Bakke2019-10-081-0/+5
* gnu: mysql: Update to 5.7.27.•••* gnu/packages/databases.scm (mysql): Update to 5.7.27. [native-inputs]: Add pkg-config. [inputs]: Add libtirpc, rpcsvc-proto. Efraim Flashner2019-10-031-3/+7
* Merge branch 'master' into core-updatesMark H Weaver2019-09-061-2/+2
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| * gnu: tdb: Update to 1.4.2.•••* gnu/packages/databases.scm (tdb): Update to 1.4.2. Marius Bakke2019-09-051-2/+2
* | Merge branch 'master' into core-updatesMark H Weaver2019-08-291-8/+6
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| * gnu: python-alembic: Update to 1.0.11.•••* gnu/packages/databases.scm (python-alembic): Update to 1.0.11. Marius Bakke2019-08-291-4/+3
| * gnu: python-pyodbc: Update to 4.0.27.•••* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.27. Tobias Geerinckx-Rice2019-08-241-4/+3
* | Merge branch 'master' into core-updatesMark H Weaver2019-08-221-2/+2
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| * gnu: python-redis: Update to 3.3.8.•••* gnu/packages/databases.scm (python-redis): Update to 3.3.8. Tobias Geerinckx-Rice2019-08-221-2/+2
* | Merge branch 'master' into core-updatesMarius Bakke2019-08-131-22/+17
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| * Merge branch 'staging'Marius Bakke2019-08-131-11/+11
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| | * Merge branch 'master' into stagingMarius Bakke2019-08-081-4/+4
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| | * | gnu: postgresql: Udpate to 10.10 [fixes CVE-2019-10208].•••* gnu/packages/databases.scm (postgresql): Update to 10.10. Marius Bakke2019-08-081-2/+2
| | * | gnu: mariadb: Update to 10.1.41 [security fixes].•••This fixes CVE-2019-2805, CVE-2019-2740, CVE-2019-2739, and CVE-2019-2737. * gnu/packages/databases.scm (mariadb): Update to 10.1.41. [source](uri): Update download URL. Marius Bakke2019-08-041-5/+5
| | * | gnu: MariaDB: Disable the TokuDB plugin.•••Fixes <https://bugs.gnu.org/35521>. Reported by Mark H Weaver <mhw@netris.org>. * gnu/packages/databases.scm (mariadb)[arguments]: Pass "-DTOKUDB_OK" in <#:configure-flags>. Enable the "innodb_fts.crash_recovery" test, which likely failed because of the high I/O load induced by TokuDB. [inputs]: Remove SNAPPY. (cherry picked from commit bba7a77ed9ad826bcdc6d9b8a183d66a23229501) Marius Bakke2019-08-041-4/+4
| * | | gnu: 4store: Remove unneeded build phase.•••* gnu/packages/databases.scm (4store)[arguments]: Remove unneeded 'generate-configure phase. Efraim Flashner2019-08-091-6/+0
| * | | gnu: 4store: Don't use unstable tarball.•••* gnu/packages/databases.scm (4store)[source]: Download using 'git-fetch'. Efraim Flashner2019-08-091-5/+6
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| * | gnu: postgresql@9: Update to 9.6.15 [fixes CVE-2019-10208].•••* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.15. Marius Bakke2019-08-081-2/+2
| * | gnu: postgresql@11: Update to 11.5 [fixes CVE-2019-10208, CVE-2019-10209].•••* gnu/packages/databases.scm (postgresql-11): Update to 11.5. Marius Bakke2019-08-081-2/+2
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* | gnu: MariaDB: Disable the TokuDB plugin.•••Fixes <https://bugs.gnu.org/35521>. Reported by Mark H Weaver <mhw@netris.org>. * gnu/packages/databases.scm (mariadb)[arguments]: Pass "-DTOKUDB_OK" in <#:configure-flags>. Enable the "innodb_fts.crash_recovery" test, which likely failed because of the high I/O load induced by TokuDB. [inputs]: Remove SNAPPY. Marius Bakke2019-07-141-4/+4
* | Merge branch 'master' into core-updates••• Conflicts: gnu/local.mk gnu/packages/python-xyz.scm gnu/packages/xml.scm guix/gexp.scm po/guix/POTFILES.in Marius Bakke2019-07-121-2/+25
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| * Merge branch 'staging'Marius Bakke2019-07-111-2/+2
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| | * Merge branch 'master' into stagingMarius Bakke2019-07-101-0/+23
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| * | | gnu: postgresql@9: Update to 9.6.14 [fixes CVE-2018-1058, CVE-2019-9193]•••* gnu/packages/databases.scm (postgresql@9): Update to 9.6.14. Efraim Flashner2019-07-101-2/+2
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| * | gnu: Add python-crate.•••* gnu/packages/databases.scm (python-crate): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois2019-07-071-0/+23
* | | Merge branch 'staging' into core-updatesMarius Bakke2019-07-021-2/+2
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| * | gnu: postgresql@10: Update to 10.9.•••* gnu/packages/databases.scm (postgresql): Update to 10.9. Marius Bakke2019-07-021-2/+2
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* | Merge branch 'master' into core-updatesLudovic Courtès2019-06-271-4/+18
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| * gnu: memcached: Update to 1.5.16.•••* gnu/packages/databases.scm (memcached): Update to 1.5.16. Tobias Geerinckx-Rice2019-06-251-2/+2
| * gnu: Add postgresql-11.•••* gnu/packages/databases.scm(postgresql-11): New variable. Gábor Boskovits2019-06-241-0/+14
| * gnu: python-lmdb: Update to 0.95.•••* gnu/packages/databases.scm (python-lmdb): Update to 0.95. Tobias Geerinckx-Rice2019-06-221-2/+2
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