| Commit message (Expand) | Author | Age | Files | Lines |
|---|
| ... | |
| * | gnu: r-rhdf5: Update to 2.28.0.•••* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.28.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-tximport: Update to 1.12.0.•••* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-mutationalpatterns: Update to 1.10.0.•••* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.10.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-bamsignals: Update to 1.16.0.•••* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.16.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-rhtslib: Update to 1.16.1.•••* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.1.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-zlibbioc: Update to 1.30.0.•••* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.30.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-motifrg: Update to 1.28.0.•••* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.28.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-seqlogo: Update to 1.50.0.•••* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.50.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-genomation: Update to 1.16.0.•••* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.16.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-seqpattern: Update to 1.16.0.•••* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.16.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-bsgenome: Update to 1.52.0.•••* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.52.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-topgo: Update to 2.36.0.•••* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.36.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-genomicfeatures: Update to 1.36.0.•••* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-rtracklayer: Update to 1.44.0.•••* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-genomicalignments: Update to 1.20.0.•••* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-summarizedexperiment: Update to 1.14.0.•••* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.14.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-delayedarray: Update to 0.10.0.•••* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.10.0.
[propagated-inputs]: Add r-matrix.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+3 |
| * | gnu: r-biostrings: Update to 2.52.0.•••* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.52.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-biocparallel: Update to 1.18.0.•••* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-biomart: Update to 2.40.0.•••* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-annotationdbi: Update to 1.46.0.•••* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.46.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-biobase: Update to 2.44.0.•••* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.44.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-genomicranges: Update to 1.36.0.•••* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-xvector: Update to 0.24.0.•••* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.24.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-limma: Update to 3.40.0.•••* gnu/packages/bioinformatics.scm (r-limma): Update to 3.40.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-variantannotation: Update to 1.30.0.•••* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.0.
[propagated-inputs]: Add r-rhtslib.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+3 |
| * | gnu: r-edger: Update to 3.26.0.•••* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-genomeinfodb: Update to 1.20.0.•••* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.20.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-iranges: Update to 2.18.0.•••* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-s4vectors: Update to 0.22.0.•••* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.22.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-bioccheck: Update to 1.20.0.•••* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.20.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-biocstyle: Update to 2.12.0.•••* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.12.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-biocviews: Update to 1.52.0.•••* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.52.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-grohmm: Update to 1.18.0.•••* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.18.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-shortread: Update to 1.42.0.•••* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.42.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-gostats: Update to 2.50.0.•••* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.50.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-category: Update to 2.50.0.•••* gnu/packages/bioinformatics.scm (r-category): Update to 2.50.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-gseabase: Update to 1.46.0.•••* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.46.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-rbgl: Update to 1.60.0.•••* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.60.0.
[propagated-inputs]: Add r-bh.
| Ricardo Wurmus | 2019-05-06 | 1 | -3/+5 |
| * | gnu: r-annotationforge: Update to 1.26.0.•••* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.26.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-dexseq: Update to 1.30.0.•••* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.30.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-deseq2: Update to 1.24.0.•••* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.24.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-genefilter: Update to 1.66.0.•••* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.66.0.
| Ricardo Wurmus | 2019-05-06 | 1 | -2/+2 |
| * | gnu: r-rhtslib: Fix build.•••* gnu/packages/bioinformatics.scm (r-rhtslib)[arguments]: Add
"--no-staged-install" to configure flags.
| Ricardo Wurmus | 2019-04-27 | 1 | -0/+3 |
| * | gnu: r-ggbio: Fix build.•••* gnu/packages/bioinformatics.scm (r-ggbio)[arguments]: Add build phase to
patch out typo.
| Ricardo Wurmus | 2019-04-27 | 1 | -0/+10 |
| * | gnu: Add umi-tools.•••* gnu/packages/bioinformatics.scm (umi-tools): New variable.
| Ricardo Wurmus | 2019-04-26 | 1 | -0/+35 |
| * | gnu: r-seurat: Update to 3.0.0.•••* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.0.0.
[propagated-inputs]: Remove r-dosnow, r-dplyr, r-dtw, r-foreach, r-fpc,
r-gplots, r-hdf5r, r-hmisc, r-httr, r-lars, r-mixtools, r-reshape2, and
r-tidyr; add r-future, r-future-apply, r-ggrepel, r-kernsmooth, r-rlang,
r-rsvd, r-scales, and r-sctransform.
| Ricardo Wurmus | 2019-04-19 | 1 | -15/+10 |
| * | gnu: r-genomicfeatures: Update to 1.34.8.•••* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.8.
| Ricardo Wurmus | 2019-04-11 | 1 | -2/+2 |
| * | gnu: Add python2-checkm-genome.•••* gnu/packages/bioinformatics.scm (python2-checkm-genome): New variable.
| Ricardo Wurmus | 2019-04-11 | 1 | -0/+36 |
| * | gnu: Add pplacer.•••* gnu/packages/bioinformatics.scm (pplacer, pplacer-scripts): New variables.
| Ricardo Wurmus | 2019-04-11 | 1 | -0/+153 |
