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* gnu: Add r-diffcyt.•••* gnu/packages/bioconductor.scm (r-diffcyt): New variable. zimoun2022-03-151-0/+38
* gnu: Add r-scannotatr.•••* gnu/packages/bioconductor.scm (r-scannotatr): New variable. zimoun2022-03-151-0/+37
* gnu: Add r-ensdb-hsapiens-v86.•••* gnu/packages/bioconductor.scm (r-ensdb-hsapiens-v86): New variable. Ricardo Wurmus2022-03-101-0/+19
* gnu: Add r-ensdb-mmusculus-v79.•••* gnu/packages/bioconductor.scm (r-ensdb-mmusculus-v79): New variable. Ricardo Wurmus2022-03-101-0/+19
* gnu: r-abn: Update to 2.6-0.•••* gnu/packages/bioconductor.scm (r-abn): Update to 2.6-0. [propagated-inputs]: Add r-doparallel and r-foreach. Ricardo Wurmus2022-01-231-3/+5
* gnu: r-activepathways: Update to 1.0.4.•••* gnu/packages/bioconductor.scm (r-activepathways): Update to 1.0.4. Ricardo Wurmus2022-01-231-2/+2
* gnu: r-bigmelon: Add r-knitr.•••* gnu/packages/bioconductor.scm (r-bigmelon)[native-inputs]: Add r-knitr. Ricardo Wurmus2022-01-211-0/+2
* gnu: Add r-hgu133plus2-db.•••* gnu/packages/bioconductor.scm (r-hgu133plus2-db): New variable. zimoun2022-01-211-0/+20
* gnu: Add r-jetset.•••* gnu/packages/bioconductor.scm (r-jetset): New variable. zimoun2022-01-211-0/+27
* gnu: r-org-dr-eg-db: Update to 3.14.0.•••* gnu/packages/bioconductor.scm (r-org-dr-eg-db): Update to 3.14.0. zimoun2022-01-211-3/+3
* gnu: r-rbowtie: Add missing input.•••* gnu/packages/bioconductor.scm (r-rbowtie)[inputs]: Add zlib. Ricardo Wurmus2022-01-201-1/+2
* gnu: r-pasilla: Use bioconductor-uri.•••* gnu/packages/bioconductor.scm (r-pasilla)[source]: Use bioconductor-uri. Ricardo Wurmus2022-01-201-3/+1
* gnu: Add r-transcriptr.•••* gnu/packages/bioconductor.scm (r-transcriptr): New variable. Ricardo Wurmus2022-01-111-0/+50
* gnu: r-sanssouci: Add source file-name.•••* gnu/packages/bioinformatics.scm (r-sanssourci)[source]: Add file-name field. Efraim Flashner2022-01-071-0/+1
* gnu: r-tximeta: Update to 1.12.4.•••* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.12.4. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-tcgabiolinks: Update to 2.22.2.•••* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.22.2. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-biodb: Update to 1.2.2.•••* gnu/packages/bioconductor.scm (r-biodb): Update to 1.2.2. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-sushi: Update to 1.32.0.•••* gnu/packages/bioconductor.scm (r-sushi): Update to 1.32.0. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-bioassayr: Update to 1.32.1.•••* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.32.1. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-universalmotif: Update to 1.12.2.•••* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.12.2. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-cytolib: Update to 2.6.1.•••* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.1. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-clusterprofiler: Update to 4.2.1.•••* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.1. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-icobra: Update to 1.22.2.•••* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.2. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-destiny: Update to 3.8.0.•••* gnu/packages/bioconductor.scm (r-destiny): Update to 3.8.0. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-diffbind: Update to 3.4.3.•••* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.3. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-systempiper: Update to 2.0.5.•••* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.5. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-structuralvariantannotation: Update to 1.10.1.•••* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.10.1. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-genomicfeatures: Update to 1.46.3.•••* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.3. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-chipseeker: Update to 1.30.3.•••* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.3. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-biocparallel: Update to 1.28.3.•••* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.3. Ricardo Wurmus2022-01-061-2/+2
* gnu: r-yapsa: Update to 1.20.1.•••* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.20.1. [propagated-inputs]: Remove r-pmcmr; add r-pmcmrplus. Ricardo Wurmus2022-01-061-3/+3
* gnu: r-activedriverwgs: Update to 1.0.3.•••* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.0.3. Ricardo Wurmus2022-01-051-2/+2
* gnu: r-activedriverwgs: Update to 1.1.2.•••* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.2. [propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38, r-bsgenome-mmusculus-ucsc-mm9, and r-bsgenome-mmusculus-ucsc-mm10. Ricardo Wurmus2022-01-051-2/+5
* gnu: r-valr: Update to 0.6.4.•••* gnu/packages/cran.scm (r-valr): Move from here... * gnu/packages/bioconductor.scm (r-valr): ...to here. Update to 0.6.4. [propagated-inputs]: Add r-rtracklayer. Ricardo Wurmus2022-01-051-0/+33
* gnu: Add r-singler.•••* gnu/packages/bioconductor.scm (r-singler): New variable. Ricardo Wurmus2021-12-161-0/+32
* gnu: Add r-celldex.•••* gnu/packages/bioconductor.scm (r-celldex): New variable. Ricardo Wurmus2021-12-161-0/+29
* gnu: Add r-maftools.•••* gnu/packages/bioconductor.scm (r-maftools): New variable. Ricardo Wurmus2021-12-141-0/+24
* gnu: Add r-tcgabiolinks.•••* gnu/packages/bioconductor.scm (r-tcgabiolinks): New variable. Ricardo Wurmus2021-12-141-0/+55
* gnu: Add r-tcgabiolinksgui-data.•••* gnu/packages/bioconductor.scm (r-tcgabiolinksgui-data): New variable. Ricardo Wurmus2021-12-141-0/+19
* Merge branch 'core-updates-frozen' into 'master'.•••At last! Maxim Cournoyer2021-12-131-3983/+3647
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| * gnu: Further simplify package inputs.•••This is the result of running: ./pre-inst-env guix style --input-simplification=safe and manually undoing changes on a dozen of packages to reduce rebuilds (derivations for emacs, icecat, and libreoffice are unchanged.) Ludovic Courtès2021-12-131-32/+32
| * gnu: Simplify package inputs.•••This commit was obtained by running: ./pre-inst-env guix style without any additional argument. Ludovic Courtès2021-12-131-3952/+3616
* | gnu: Add r-chromvarmotifs.•••* gnu/packages/bioconductor.scm (r-chromvarmotifs): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu2021-12-131-0/+28
|/
* gnu: Add r-sanssouci.•••* gnu/packages/bioconductor.scm (r-sanssouci): New variable. Ricardo Wurmus2021-12-131-0/+31
* gnu: Add r-isoformswitchanalyzer.•••* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): New variable. Ricardo Wurmus2021-12-131-0/+53
* gnu: Add r-drimseq.•••* gnu/packages/bioconductor.scm (r-drimseq): New variable. Ricardo Wurmus2021-12-131-0/+35
* gnu: Add r-dearseq.•••* gnu/packages/bioconductor.scm (r-dearseq): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Marcel Schilling2021-12-131-0/+30
* gnu: r-flowclust: Add gsl.•••* gnu/packages/bioconductor.scm (r-flowclust)[inputs]: Remove accidentally committed comment character. Ricardo Wurmus2021-12-031-1/+0
* gnu: Add r-scdblfinder.•••* gnu/packages/bioconductor.scm (r-scdblfinder): New variable. Ricardo Wurmus2021-12-021-0/+40
* gnu: Add r-phyloseq.•••* gnu/packages/cran.scm (r-phyloseq): New variable Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Nicolas Vallet2021-12-011-0/+39
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