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* gnu: Add nim.•••* gnu/packages/nim.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add nim.scm. José Miguel Sánchez García2017-01-091-0/+1
* gnu: Add Prosody service.•••* gnu/services/messaging.scm: New file. * gnu/services/configuration.scm: New exported procedures. * gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/services/messaging.scm. * doc/guix.texi (Messaging Services): New section. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Clément Lassieur2017-01-081-0/+1
* gnu: ruby-yard: Update to 0.9.6.•••* gnu/packages/ruby.scm (ruby-yard): Update to 0.9.6. [source]: Use 'GitHub' source. [arguments]: Run tests without 'Rakefile'. [native-inputs]: Replace 'ruby-rspec-2' with ruby-rspec'. * gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Ben Woodcroft2017-01-081-1/+0
* gnu: python-pygpgme: Fix build failure.•••* gnu/packages/patches/python-pygpgme-fix-pinentry-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gnupg.scm (python-pygpgme, python2-pygpgme)[source]: Use it. Leo Famulari2017-01-071-0/+1
* gnu: python-pycrypto: Fix CVE-2013-7459.•••* gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python-pycrypto, python2-pycrypto)[source]: Use the patch. Use pypi-uri. Leo Famulari2017-01-061-0/+1
* gnu: khal: Disable failing tests.•••* gnu/packages/patches/khal-disable-failing-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/calendar.scm (khal): Use it. Leo Famulari2017-01-061-0/+1
* gnu: unrtf: Fix CVE-2016-10091.•••* gnu/packages/patches/unrtf-CVE-2016-10091.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/unrtf.scm (unrtf)[source]: Use it. Leo Famulari2017-01-041-0/+1
* gnu: inkscape: Update to 0.92.0.•••* gnu/packages/patches/inkscape-drop-wait-for-targets.patch: Remove it. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/inkscape.scm (inkscape): Update to 0.92.0. [build-system]: Use "cmake-build-system". [native-inputs]: Add glib:bin. [arguments]: Remove obsolete arguments; disable tests. Ricardo Wurmus2017-01-041-2/+1
* gnu: Add ocaml-bitstring.•••* gnu/packages/ocaml.scm (ocaml-bitstring): New variable. * gnu/packages/patches/ocaml-bitstring-fix-configure.patch: New file. * gnu/local.mk (dist_patch_DATA): New patch. Signed-off-by: David Craven <david@craven.ch> Julien Lepiller2017-01-041-0/+1
* gnu: Add ocaml-bisect.•••* gnu/packages/ocaml.scm (ocaml-bisect): New variable. * gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch. Signed-off-by: David Craven <david@craven.ch> Julien Lepiller2017-01-041-0/+1
* gnu: ocaml: Add a .file directive to generated .s files.•••* gnu/packages/ocaml.scm (ocaml)[origin]: Add patch. * gnu/packages/patches/ocaml-Add-a-.file-directive.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch. Signed-off-by: David Craven <david@craven.ch> Julien Lepiller2017-01-041-0/+1
* gnu: idris: Move to (gnu packages idris).•••* gnu/packages/haskell.scm: Move 'idris' to... * gnu/packages/idris.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add idris.scm. David Craven2017-01-041-0/+1
* gnu: slock: Update to 1.4.•••* gnu/packages/suckless.scm (slock): Update to 1.4. [source] Remove CVE-2016-6866 patch (no longer needed). * gnu/packages/patches/slock-CVE-2016-6866.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Leo Famulari <leo@famulari.name> Alex Griffin2017-01-031-1/+0
* gnu: chicken: Fix CVE-2016-{6830,6831}.•••* gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch: New file. * gnu/local.mk (dist_patch_DATA): Use it. * gnu/packages/scheme.scm (chicken)[source]: Use it. Kei Kebreau2017-01-031-0/+1
* gnu: python-dendropy: Update to 4.2.0.•••* gnu/packages/bioinformatics.scm (python-dendropy): Update to 4.2.0. [source]: Remove patch. (python2-dendropy)[source]: Use the same source as python-dendropy. * gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Ben Woodcroft2017-01-011-1/+0
* gnu: libpng: Mention CVE-2016-10087.•••* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: Rename to ... * gnu/packages/patches/libpng-CVE-2016-10087.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust. * gnu/packages/image.scm (libpng/fixed)[source]: Use renamed patch. Leo Famulari2016-12-301-1/+1
* gnu: multiqc: Update to 0.9.•••Suggested by Raoul Bonnal <ilpuccio.febo@gmail.com>. * gnu/packages/bioinformatics.scm (multiqc): Update to 0.9. [origin]: Add patch. * gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Ben Woodcroft2016-12-301-0/+1
* gnu: libpng: Fix a null pointer dereference [fixes security issue].•••* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libpng)[replacement]: New field. (libpng/fixed): New variable. Leo Famulari2016-12-291-0/+1
* gnu: libxml2: Fix CVE-2016-5131.•••* gnu/packages/patches/libxml2-CVE-2016-5131.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xml.scm (libxml2/fixed)[source]: Add it. Leo Famulari2016-12-241-0/+1
* gnu: libxml2: Fix CVE-2016-4658.•••* gnu/packages/xml.scm (libxml2)[replacement]: New field. (libxml2/fixed): New variable. * gnu/packages/patches/libxml2-CVE-2016-4658.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Leo Famulari2016-12-241-0/+1
* gnu: gnupg: Fix build on 32-bit architectures.•••* gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/gnupg.scm (gnupg)[source]: Use it. Marius Bakke2016-12-221-0/+1
* gnu: qemu: Update to 2.8.0.•••* gnu/packages/qemu.scm (qemu): Update to 2.8.0. [source]: Remove patches. [arguments]: Set host_cc during 'configure. * gnu/packages/patches/qemu-CVE-2016-8576.patch, gnu/packages/patches/qemu-CVE-2016-8577.patch, gnu/packages/patches/qemu-CVE-2016-8577.patch: Remove files. * gnu/local.mk (dist_patch_DATA): Remove them. Efraim Flashner2016-12-211-3/+0
* gnu: kdbusaddons: Embed kinit store dir, avoid dependency cycles.•••kdbusaddons needs to know the location of the kdeinit5 executable, provided by kinit. kinit depends on kdbusaddons, so we add bootstrap versions of all packages in the dependency chain from kinit to kdbusaddons to avoid cyclic dependencies. * gnu/packages/kde-frameworks.scm (kinit-bootstrap, kdbusaddons-bootstrap): New variables. (kdbusaddons)[inputs]: Add kinit-bootstrap. [source,arguments]: Add patch and substitution to embed kinit-bootstrap's store directory in the code. * gnu/packages/patches/kdbusaddons-kinit-file-name.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thomas Danckaert2016-12-191-0/+1
* gnu: openssh: Update to 7.4p1.•••* gnu/packages/ssh.scm (openssh): Update to 7.4p1. [source]: Remove 'openssh-memory-exhaustion.patch'. * gnu/packages/patches/openssh-memory-exhaustion.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Leo Famulari2016-12-191-1/+0
* gnu: libupnp: Fix CVE-2016-8863.•••* gnu/packages/patches/libupnp-CVE-2016-8863.patch: New file. * gnu/local.mk (dist_patch_DATA): Use it. * gnu/packages/libupnp.scm (libupnp)[source]: Use it. Leo Famulari2016-12-161-0/+1
* gnu: Add system test for the rpcbind-daemon service.•••* gnu/tests/nfs.scm: New file. * gnu/local.mk: Add it. John Darrington2016-12-151-0/+1
* gnu: Add rust bootstrap binaries.•••* gnu/packages/rust.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add rust.scm. David Craven2016-12-141-0/+1
* gnu: onionshare: Update to 0.9.2 (fixes CVE-2016-5026).•••* gnu/packages/tor.scm (onionshare): Update to 0.9.2. [source]: Remove patch. [arguments]: Update substitutions for new version. * gnu/packages/patches/onionshare-fix-install-paths.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Efraim Flashner2016-12-131-1/+0
* gnu: cssc: Update to 1.4.0.•••* gnu/packages/version-control.scm (cssc): Update to 1.4.0. [source]: Remove unneeded patches (i.e. all of them). * gnu/packages/patches/cssc-gets-undeclared.patch: Delete file. * gnu/packages/patches/cssc-missing-include.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Remove deleted patches. Tobias Geerinckx-Rice2016-12-121-2/+0
* Merge branch 'master' into stagingMark H Weaver2016-12-101-1/+1
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| * gnu: Remove unused patch.•••* gnu/packages/patches/openjpeg-CVE-2015-6581.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Efraim Flashner2016-12-101-1/+0
| * gnu: openjpeg: Add fixes for CVE-2016-{9850,9851}.•••* gnu/packages/image.scm (openjpeg)[replacement]: New field. (openjpeg/fixed): New variable, patch against CVE-2016-9850, CVE-2016-9851. * gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner2016-12-101-0/+1
* | Merge remote-tracking branch 'origin/master' into stagingLudovic Courtès2016-12-091-0/+9
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| * gnu: tcsh: Fix out of bounds read.•••* gnu/packages/patches/tcsh-fix-out-of-bounds-read.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/shells.scm (tcsh)[replacement]: New field. (tcsh/fixed): New variable. Leo Famulari2016-12-081-0/+1
| * gnu: Add vis.•••* gnu/packages/text-editors.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Co-authored-by: Marius Bakke <mbakke@fastmail.com> José Miguel Sánchez García2016-12-081-0/+1
| * gnu: cross-base: Move phases to (gnu build cross-toolchain).•••* gnu/packages/cross-base.scm (cross-gcc-arguments) <#:phases>: Use 'cross-gcc-build-phases', and move body cross-toolchain.scm. (cross-gcc): Add #:imported-modules. Add (gnu build cross-toolchain) to #:modules. * gnu/build/cross-toolchain.scm: New file, with code from 'cross-gcc-arguments'. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Ludovic Courtès2016-12-071-0/+1
| * gnu: readline: support mingw.•••* gnu/packages/patches/readline-7.0-mingw.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/readline.scm (readline): Support MinGW. Jan Nieuwenhuizen2016-12-071-0/+1
| * gnu: Add mingw-w64.•••* gnu/packages/patches/gcc-4.9.3-mingw-gthr-default.patch, gnu/packages/patches/mingw-w64-5.0rc2-gcc-4.9.3.patch, gnu/packages/mingw.scm: New files. * gnu/local.mk (dist_patch_DATA): Add the patches. (GNU_SYSTEM_MODULES): Add mingw.scm. Jan Nieuwenhuizen2016-12-071-0/+3
| * gnu: httpd: Add fix for CVE-2016-8740.•••* gnu/packages/web.scm (httpd)[source]: Add patch for CVE-2016-8740. * gnu/packages/patches/httpd-CVE-2016-8740.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner2016-12-061-0/+1
| * gnu: Add seq24.•••* gnu/packages/music.scm (seq24): New variable. * gnu/packages/patches/seq24-rename-mutex.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. Ricardo Wurmus2016-12-061-0/+1
* | gnu: libepoxy: Add patch to avoid segfault when GL support is missing.•••* gnu/packages/patches/libepoxy-gl-null-checks.patch: New file. * gnu/packages/gl.scm (libepoxy)[source]: Add it. * gnu/local.mk (dist_patch_DATA): Add it. Ludovic Courtès2016-12-091-0/+1
* | gnu: mupdf: Update to 1.10a.•••* gnu/packages/patches/mupdf-CVE-2016-6265.patch: Delete file. * gnu/packages/patches/mupdf-CVE-2016-6525.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-7504.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-7505.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-7506.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-7563.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-7564.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-8674.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-9017.patch: Likewise. * gnu/packages/patches/mupdf-CVE-2016-9136.patch: Likewise. * gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Adjust to 1.10a. * gnu/local.mk (dist_patch_DATA): Remove deleted patches. * gnu/packages/pdf.scm (mupdf): Update to 1.10a. [source]: Remove patches. Marius Bakke2016-12-041-10/+0
* | Merge branch 'master' into stagingMarius Bakke2016-12-041-12/+6
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| * gnu: Move image viewers to (gnu packages image-viewers).•••* gnu/packages/feh.scm (feh): Remove file. Move package to... * gnu/packages/geeqie.scm (geeqie): Likewise... * gnu/packages/sxiv.scm (sxiv): Likewise... * gnu/packages/image-viewers.scm: ... here. * gnu/local.mk (GNU_SYSTEM_MODULES): Remove files. Alex Kost2016-12-041-3/+0
| * gnu: Rename owncloud.scm to sync.scm.•••* gnu/packages/owncloud.scm: Rename to ... * gnu/packages/sync.scm: ... this. * gnu/local.mk (GNU_SYSTEM_MODULES): Register it. Efraim Flashner2016-12-041-1/+1
| * gnu: icecat: Update to 45.5.1-gnu1.•••* gnu/packages/gnuzilla.scm (icecat): Update to 45.5.1-gnu1. [source]: Remove temporary URI for 45.3 beta. Fix URI computation. Remove outdated patches. Add more cherry-picked bug fixes from upstream mozilla-esr45. Use 'list' instead of quasiquote in 'patches' field. Mark H Weaver2016-12-031-1/+0
| * gnu: Add fcgi.•••* gnu/packages/patches/fcgi-2.4.0-gcc44-fixes.patch: New file. * gnu/packages/patches/fcgi-2.4.0-poll.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patches. * gnu/packages/web.scm (fcgi): New variable. Ricardo Wurmus2016-12-031-0/+2
| * gnu: vtk: Upgrade to 7.1.0.•••* gnu/packages/vtk.scm (vtk): Upgrade to 7.1.0. [source]: Remove patches. Use version-major+minor. * gnu/packages/patches/vtk-mesa-10.patch: Delete patch. * gnu/local.mk (dist_patch_DATA): Remove it. Eric Bavier2016-12-011-1/+0
| * gnu: netcdf: Upgrade to 4.4.1.1.•••* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to 4.4.1.1. [source]: Adjust patch name, add netcdf-tst_h_par.patch * gnu/packages/patches/netcdf-config.date.patch: Rename to... * gnu/packages/patches/netcdf-date-time.patch: ...this. Adjust for latest source. * gnu/packages/patches/netcdf-tst_h_par.patch: New patch. * gnu/local.mk (dist_patch_DATA): Adjust patches. Eric Bavier2016-12-011-1/+2
| * gnu: gst-plugins-good: Update to 1.10.2.•••* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.2. [source]: Remove patches. * gnu/packages/patches/gst-plugins-good-fix-crashes.patch, gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch, gnu/packages/patches/gst-plugins-good-fix-signedness.patch, gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: Remove files. * gnu/local.mk (dist_patch_DATA): Remove them. Efraim Flashner2016-12-011-4/+0