summaryrefslogtreecommitdiff
Commit message (Expand)AuthorAgeFilesLines
* gnu: r-seurat: Update to 2.1.0.•••* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.1.0. [propagated-inputs]: Add r-diffusionmap, r-dtw, r-ggjoy, r-hmisc, r-ica, r-mass, r-matrix, r-nmf, r-plotly, r-sdmtools, r-tidyr; remove r-plyr, r-rcppeigen, r-fastica. Ricardo Wurmus2017-12-181-70/+70
* gnu: Add r-diffusionmap.•••* gnu/packages/graph.scm (r-diffusionmap): New variable. Ricardo Wurmus2017-12-181-0/+26
* gnu: Add r-ggjoy.•••* gnu/packages/cran.scm (r-ggjoy): New variable. Ricardo Wurmus2017-12-181-0/+22
* gnu: Add r-ggridges.•••* gnu/packages/cran.scm (r-ggridges): New variable. Ricardo Wurmus2017-12-181-0/+24
* gnu: Add r-scatterplot3d.•••* gnu/packages/cran.scm (r-scatterplot3d): New variable. Ricardo Wurmus2017-12-181-0/+18
* gnu: Add r-sdmtools.•••* gnu/packages/cran.scm (r-sdmtools): New variable. Ricardo Wurmus2017-12-181-0/+24
* gnu: Add r-dtw.•••* gnu/packages/cran.scm (r-dtw): New variable. Ricardo Wurmus2017-12-181-0/+23
* gnu: Add r-ica.•••* gnu/packages/cran.scm (r-ica): New variable. Ricardo Wurmus2017-12-181-0/+20
* gnu: r-seurat: Fix ModularityOptimizer.jar.•••* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class attribute in manifest. Ricardo Wurmus2017-12-181-5/+11
* gnu: qmidiarp: Update to 0.6.5.•••* gnu/packages/music.scm (qmidiarp): Update to 0.6.5. Ricardo Wurmus2017-12-181-2/+2
* gnu: Add noise-repellent.•••* gnu/packages/audio.scm (noise-repellent): New variable. Ricardo Wurmus2017-12-181-0/+48
* gnu: Add aj-snapshot.•••* gnu/packages/music.scm (aj-snapshot): New variable. Ricardo Wurmus2017-12-181-0/+28
* gnu: Add jack-capture.•••* gnu/packages/music.scm (jack-capture): New variable. Ricardo Wurmus2017-12-181-0/+37
* gnu: Add qjackrcd.•••* gnu/packages/audio.scm (qjackrcd): New variable. Ricardo Wurmus2017-12-181-0/+32
* gnu: Add whysynth.•••* gnu/packages/music.scm (whysynth): New variable. Ricardo Wurmus2017-12-181-0/+37
* gnu: Add sonivox-eas.•••* gnu/packages/music.scm (sonivox-eas): New variable. Ricardo Wurmus2017-12-181-0/+31
* doc: Fix typo.•••* doc/guix.texi: remove double occurence of generations. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Martin Castillo2017-12-181-1/+0
* nls: Update 'hu' translation.Ludovic Courtès2017-12-181-291/+18634
* vm: Pass the host's /dev/urandom to the guest at /dev/hwrng.•••* gnu/build/vm.scm (load-in-linux-vm): Use QEMU's virtio-rng-pci. * gnu/system/vm.scm (common-qemu-options): Likewise. Leo Famulari2017-12-182-2/+6
* gnu: openssl: Update replacement to 1.0.2n [fixes CVE-2017-{3737,3738}].•••* gnu/packages/tls.scm (openssl)[replacement]: Use openssl-1.0.2n. (openssl-1.0.2m): Replace with ... (openssl-1.0.2n): ... this updated version. Update comment. Mark H Weaver2017-12-171-5/+5
* gnu: Add mod-wsgi.•••* gnu/packages/web.scm (mod-wsgi): New variable. Christopher Baines2017-12-171-0/+30
* gnu: system: vm: Use loose cache for 9p file system.•••This improves the performance of the shared store for operations involving lots of files, e.g. searching through the store. * gnu/system/vm.scm (mapping->file-system): Add cache=loose to options. Christopher Baines2017-12-171-1/+1
* gnu: grammalecte: Fix 'license' field.•••* gnu/packages/dictionaries.scm (grammalecte)[license]: Change name to 'gpl3+'. Ludovic Courtès2017-12-171-1/+1
* man-db: Autoload (gdbm).•••Fixes 'guix pull'. Reported by ofosos on #guix. * guix/man-db.scm: Use 'module-autoload!' instead of 'module-use!'. so that (gdbm) is not loaded until we need it. Ludovic Courtès2017-12-171-1/+1
* services: certbot: Fix certbot renewal job.•••Quote the list of hosts, to avoid generating a broken job definition. * gnu/services/certbot.scm (certbot-renewal-jobs): Quote the hosts when passing them in to the job gexp. Christopher Baines2017-12-171-1/+1
* gnu: Add grammalecte.•••* gnu/packages/dictionaries.scm (grammalecte): New variable. Nicolas Goaziou2017-12-171-0/+40
* gnu: gourmet: Fix runtime failure and enhance plugin.•••Fixes <https://bugs.gnu.org/29227>. Reported by Caleb Herbert <csh@bluehome.net>. * gnu/packages/nutrition.scm (gourmet)[inputs]: Add python-lxml. [arguments]: Custom install phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Mark Meyer2017-12-171-1/+8
* gnu-maintenance: 'latest-ftp-release' ignores "unstable" directories.•••* guix/gnu-maintenance.scm (latest-ftp-release): Filter out "unstable" directories. Ludovic Courtès2017-12-171-0/+3
* gnu: pinentry-tty: Add meta-data for 'guix refresh'.•••* gnu/packages/gnupg.scm (pinentry-tty)[properties]: New field. Ludovic Courtès2017-12-171-2/+5
* profiles: Use (guix man-db) to create the manual database.•••Fixes <https://bugs.gnu.org/29654>. Reported by Ruud van Asseldonk <dev+guix@veniogames.com>. This also speeds up database creation compared to "man-db --create" (less than half the time, on a warm cache, for 19k pages.) * guix/man-db.scm: New file. * Makefile.am (MODULES_NOT_COMPILED): Add it. * guix/profiles.scm (manual-database): Rewrite to use (guix man-db). Ludovic Courtès2017-12-173-61/+252
* services: cleanup: Remove "/run/udev/watch.old" directory.•••* gnu/services.scm (cleanup-gexp): Remove "/run/udev/watch.old" directory. Danny Milosavljevic2017-12-171-1/+2
* gnu: global: Update to 6.6.1 [fixes CVE-2017-17531].•••* gnu/packages/code.scm (global): Update to 6.6.1. Efraim Flashner2017-12-171-2/+2
* gnu: python-dulwich: Update to 0.18.6 [fixes CVE-2017-16228].•••* gnu/packages/python.scm (python-dulwich, python2-dulwich): Update to 0.18.6. Leo Famulari2017-12-161-2/+3
* gnu: krita: Enhance krita.•••* gnu/packages/kde.scm (krita)[inputs]: Add libjpeg-turbo, ilmbase and openexr. [native-inputs]: Add vc. [arguments]: Set path to headers for ilmbase. Signed-off-by: Kei Kebreau <kkebreau@posteo.net> Mark Meyer2017-12-161-3/+10
* gnu: borg: Fix a data loss bug.•••See <https://github.com/borgbackup/borg/issues/3444> for more information. * gnu/packages/patches/borg-fix-archive-corruption-bug.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/backup.scm (borg)[source]: Use it. Leo Famulari2017-12-163-0/+70
* guix: offload: Add "status" sub-command.•••* guix/scripts/offload.scm (check-machine-status): New procedure. (guix-offload): Call it when the argument is "status". * doc/guix.texi (Daemon Offload Setup): Document it. Ricardo Wurmus2017-12-162-0/+48
* gnu: guix: Update snapshot to 02345c.•••* gnu/packages/package-management.scm (guix): Update to 02345c. Mathieu Othacehe2017-12-161-3/+3
* gnu: lookingglass: Limit to Intel compatable systems.•••* gnu/packages/virtualization.scm (lookingglass)[supported-systems]: New field. Efraim Flashner2017-12-161-0/+2
* gnu: gx-saturator-lv2: Update to 0-3.605330f43.•••* gnu/packages/music.scm (gx-saturator-lv2): Update to 0-3.605330f43. Ricardo Wurmus2017-12-161-3/+3
* gnu: gx-slow-gear-lv2: Update to 0-3.5d37e775b.•••* gnu/packages/music.scm (gx-slow-gear-lv2): Update to 0-3.5d37e775b. Ricardo Wurmus2017-12-161-3/+3
* gnu: gx-vbass-preamp-lv2: Update to 0-2.eb999b0ca.•••* gnu/packages/music.scm (gx-vbass-preamp-lv2): Update to 0-2.eb999b0ca. [inputs]: Add gtk+-2. [native-inputs]: Add pkg-config. (gx-overdriver-lv2, gx-tone-mender-lv2, gx-push-pull-lv2, gx-switchless-wah-lv2): Inherit from gx-guvnor-lv2. Ricardo Wurmus2017-12-161-7/+12
* gnu: Add libvdpau-va-gl.•••* gnu/packages/video.scm (libvdpau-va-gl): New variable. * gnu/packages/patches/libvdpau-va-gl-unbundle.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner2017-12-163-0/+71
* gnu: Add knights.•••* gnu/packages/games.scm (knights): New variable. Ricardo Wurmus2017-12-161-0/+41
* gnu: axoloti-runtime: Update ChibiOS URL.•••* gnu/packages/axoloti.scm (axoloti-runtime)[inputs]: Update URL for ChibiOS sources. Ricardo Wurmus2017-12-161-1/+1
* gnu: mod-utilities: Update to 0-2.80ea3ea9f.•••* gnu/packages/music.scm (mod-utilities): Update to 0-2.80ea3ea9f. [arguments]: Set PREFIX and CC. Ricardo Wurmus2017-12-161-5/+7
* gnu: gx-vintage-fuzz-master-lv2: Fetch sources from git.•••* gnu/packages/music.scm (gx-vintage-fuzz-master-lv2)[source]: Fetch from git. Ricardo Wurmus2017-12-161-6/+6
* gnu: gx-super-fuzz-lv2: Fetch sources from git.•••* gnu/packages/music.scm (gx-super-fuzz-lv2)[source]: Fetch from git. Ricardo Wurmus2017-12-161-6/+6
* gnu: gx-voodoo-fuzz-lv2: Fetch sources from git•••* gnu/packages/music.scm (gx-voodoo-fuzz-lv2)[source]: Fetch from git. Ricardo Wurmus2017-12-161-6/+6
* gnu: gx-hyperion-lv2: Fetch sources from git.•••* gnu/packages/music.scm (gx-hyperion-lv2)[source]: Fetch from git. Ricardo Wurmus2017-12-161-6/+6
* gnu: gx-suppa-tone-bender-lv2: Fetch sources from git.•••* gnu/packages/music.scm (gx-suppa-tone-bender-lv2)[source]: Fetch from git. Ricardo Wurmus2017-12-161-6/+6