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* gnu: vulkan-headers: Update to 1.1.121.•••* gnu/packages/vulkan.scm (vulkan-headers): Update to 1.1.121. * gnu/packages/vulkan.scm (vulkan-loader): Update hash. * gnu/packages/vulkan.scm (vulkan-tools): Update hash. Rutger Helling2019-09-111-4/+4
* gnu: mesa: Update to 19.1.5.•••* gnu/packages/gl.scm (mesa): Update to 19.1.5. Rutger Helling2019-08-291-2/+2
* gnu: wayland-protocols: Update to 1.18.•••* gnu/packages/freedesktop.scm (wayland-protocols): Update to 1.18. Rutger Helling2019-08-291-2/+2
* gnu: libvdpau: Update to 1.3.•••* gnu/packages/video.scm (libvdpau): Update to 1.3. [source]: Switch to git-fetch. [build-system]: Switch to meson-build-system. Rutger Helling2019-08-291-7/+8
* gnu: qt: Update to 5.12.4.•••* gnu/packages/qt.scm (qt, qtbase, qtsvg, qtimageformats, qtx11extras, qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors, qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel, qtwebglplugin, qtwebview, qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2, qtgraphicaleffects, qtgamepad, qtscxml, qtpurchasing, qtcanvas3d, qtcharts, qtdatavis3d, qtnetworkauth, qtremoteobjects, qtspeech): Update to 5.12.4. (qt, qtbase)[source]: Remove xkbcommon from list of directories to remove. (qtbase)[source]: Remove upstreamed patch. (python-sip): Update to 4.19.18. [source]: Update to new source uri. (python-pyqt): Update to 5.12.3. [source]: Update to new source uri. * gnu/packages/patches/qtbase-old-kernel.patch: Remove patch. * gnu/local.mk (dist_patch_DATA): Remove it. Efraim Flashner2019-08-293-105/+76
* gnu: libinput: Update to 1.14.0.•••* gnu/packages/freedesktop.scm (libinput): Update to 1.14.0. Rutger Helling2019-08-151-2/+2
* gnu: mesa: Remove unnecessary inputs.•••* gnu/packages/gl.scm (mesa)[native-inputs]: Remove unnecessary inputs. Rutger Helling2019-08-151-3/+1
* gnu: vulkan-headers: Update to 1.1.119.•••* gnu/packages/vulkan.scm (vulkan-headers): Update to 1.1.119. [arguments]: Remove unnecessary phases. * gnu/packages/vulkan.scm (vulkan-loader): Update hash. * gnu/packages/vulkan.scm (vulkan-tools): Update hash. Rutger Helling2019-08-151-26/+4
* gnu: rust: Fix building.•••This is a follow-up to e07b04882a621f0e78ec9cc81071722529530290. * gnu/packages/rust.scm (rust@1.19, rust@1.32)[arguments]: When using functions from (guix build cargo-utils), make sure to include said module in that build phase. Efraim Flashner2019-08-141-0/+2
* gnu: rust: Use 'generate-all-checksums'.•••* gnu/packages/rust.scm (rust@1.19)[arguments]: During custom 'patch-cargo-checksums phase, replace call to 'generate-checksums' with call to 'generate-all-checksums'. (rust@1.32)[arguments]: Same. Efraim Flashner2019-08-121-22/+4
* gnu: gnuzilla: Use 'generate-all-checksums'.•••* gnu/packages/gnuzilla.scm (icecat)[arguments]: During custom 'patch-cargo-checksums phase, replace call to 'generate-checksums' with call to 'generate-all-checksums'. Efraim Flashner2019-08-121-11/+3
* build/cargo-build-system: Move generate-all-checksums to cargo-utils.•••* guix/build/cargo-build-system.scm (generate-all-checksums): Move procedure ... * guix/build/cargo-utils.scm: ... to here. Efraim Flashner2019-08-122-16/+15
* Revert "gnu: python-packaging: Update to 19.1."•••The new version fails tests on architectures other than x86_64. This reverts commit cb16a9fba9f1b28bde63daaa1bf241c130d2caad. Marius Bakke2019-08-111-2/+2
* Merge branch 'master' into stagingMarius Bakke2019-08-0820-478/+887
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| * gnu: ruby-pg: Update to 1.1.4.•••* gnu/packages/ruby.scm (ruby-pg): Update to 1.1.4. [inputs]: Change from POSTGRESQL-9.6 to POSTGRESQL. Marius Bakke2019-08-081-3/+3
| * gnu: exempi: Update home page.•••* gnu/packages/freedesktop.scm (exempi)[home-page]: Update to current. Marius Bakke2019-08-081-1/+1
| * gnu: postgresql@9: Update to 9.6.15 [fixes CVE-2019-10208].•••* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.15. Marius Bakke2019-08-081-2/+2
| * gnu: postgresql@11: Update to 11.5 [fixes CVE-2019-10208, CVE-2019-10209].•••* gnu/packages/databases.scm (postgresql-11): Update to 11.5. Marius Bakke2019-08-081-2/+2
| * gnu: exempi: Update to 2.5.1.•••* gnu/packages/freedesktop.scm (exempi): Update to 2.5.1. Marius Bakke2019-08-081-2/+2
| * gnu: LibRaw: Update to 0.19.4.•••* gnu/packages/photo.scm (libraw): Update to 0.19.4. Marius Bakke2019-08-081-2/+2
| * gnu: r-modelr: Update to 0.1.5.•••* gnu/packages/cran.scm (r-modelr): Update to 0.1.5. [propagated-inputs]: Remove r-lazyeval; add r-rlang. Ricardo Wurmus2019-08-081-3/+3
| * gnu: r-quantreg: Update to 5.51.•••* gnu/packages/statistics.scm (r-quantreg): Update to 5.51. Ricardo Wurmus2019-08-081-2/+2
| * gnu: r-knitr: Update to 1.24.•••* gnu/packages/statistics.scm (r-knitr): Update to 1.24. Ricardo Wurmus2019-08-081-2/+2
| * gnu: r-markdown: Update to 1.1.•••* gnu/packages/statistics.scm (r-markdown): Update to 1.1. [propagated-inputs]: Add r-xfun. Ricardo Wurmus2019-08-081-3/+4
| * gnu: r-ggsignif: Update to 0.6.0.•••* gnu/packages/cran.scm (r-ggsignif): Update to 0.6.0. Ricardo Wurmus2019-08-081-2/+2
| * gnu: r-hdf5array: Update to 1.12.2.•••* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.2. Ricardo Wurmus2019-08-081-2/+2
| * gnu: r-biocparallel: Update to 1.18.1.•••* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.1. Ricardo Wurmus2019-08-081-2/+2
| * gnu: ToME4: Disable parallel build.•••* gnu/packages/games.scm (tome4)[arguments]: Add <#:parallel-build?>. Marius Bakke2019-08-081-0/+4
| * Revert "gnu: Add vcflib."•••This reverts commit 194e45f90addf5f9bd3e7e2de1dd50b3071f053b. This commit does not have a good commit message, and it breaks master Efraim Flashner2019-08-081-105/+0
| * Revert "gnu: Add freebayes."•••This reverts commit 173e046950e153477a6aaa0f4860d8f080df6843. Efraim Flashner2019-08-081-123/+0
| * gnu: Add freebayes.•••* gnu/packages/bioinformatics.scm (freebayes): New variable. Pierre Neidhardt2019-08-081-0/+123
| * gnu: Add vcflib.•••* gnu/packages/bioinformatics.scm (vcflib): New variable. Pierre Neidhardt2019-08-081-0/+105
| * gnu: Add fastahack.•••* gnu/packages/bioinformatics.scm (fastahack): New variable. Pierre Neidhardt2019-08-081-0/+33
| * gnu: Add fsom.•••* gnu/packages/bioinformatics.scm (fsom): New variable. Pierre Neidhardt2019-08-081-0/+30
| * gnu: Add multichoose.•••* gnu/packages/bioinformatics.scm (multichoose): New variable. Pierre Neidhardt2019-08-081-0/+34
| * gnu: Add smithwaterman.•••* gnu/packages/bioinformatics.scm (smithwaterman): New variable. Pierre Neidhardt2019-08-081-0/+31
| * gnu: Add tabixpp.•••* gnu/packages/bioinformatics.scm (tabixpp): New variable. Pierre Neidhardt2019-08-081-0/+40
| * gnu: Add network-manager-openconnect.•••* gnu/packages/gnome.scm (network-manager-openconnect): New variable. Efraim Flashner2019-08-081-0/+51
| * gnu: ghc-trifecta: Disable tests.•••* gnu/packages/haskell.scm (ghc-trifecta)[arguments]: Disable tests. Robert Vollmert2019-08-071-0/+1
| * gnu: ghc-yaml: Disable tests.•••* gnu/packages/haskell.scm (ghc-yaml)[arguments]: Disable tests. Robert Vollmert2019-08-071-0/+3
| * gnu: ghc-libmpd-haskell: Disable tests.•••* gnu/packages/haskell.scm (ghc-libmpd-haskell)[arguments]: Disable tests. Robert Vollmert2019-08-071-0/+3
| * gnu: Remove ghc-packedstring.•••The package has no reverse dependencies and is deprecated upstream. * gnu/packages/haskell.scm (ghc-packedstring): Remove variable. Robert Vollmert2019-08-071-29/+0
| * gnu: Remove ghc-haddock-test.•••The package doesn't build, has no reverse dependencies, and is deprecated upstream. * gnu/packages/haskell.scm (ghc-haddock-test): Remove variable. Robert Vollmert2019-08-071-22/+0
| * gnu: Remove ghc-regex-tdfa-rc.•••The package doesn't build, has no reverse dependencies, and is deprecated upstream. * gnu/packages/haskell.scm (ghc-regex-tdfa-rc): Remove variable. Robert Vollmert2019-08-071-24/+0
| * gnu: Add ghc-snap-server.•••* gnu/packages/haskell-web.scm (ghc-snap-server): New variable. Robert Vollmert2019-08-071-0/+54
| * gnu: Add ghc-snap-core.•••* gnu/packages/haskell-web.scm (ghc-snap-core): New variable. Robert Vollmert2019-08-071-0/+50
| * gnu: Add ghc-http-streams.•••* gnu/packages/haskell-web.scm (ghc-http-streams): New variable. Robert Vollmert2019-08-071-0/+37
| * gnu: Add ghc-http-common.•••* gnu/packages/haskell-web.scm (ghc-http-common): New variable. Robert Vollmert2019-08-071-0/+28
| * gnu: Add ghc-openssl-streams.•••* gnu/packages/haskell-crypto.scm (ghc-openssl-streams): New variable. Robert Vollmert2019-08-071-0/+32
| * gnu: Add ghc-hsopenssl.•••* gnu/packages/haskell-crypto.scm (ghc-hsopenssl): New variable. Robert Vollmert2019-08-071-0/+31