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* gnu: r-bluster: Move from "annotation" to "package" section.•••* gnu/packages/bioconductor.scm (r-bluster): Move variable. Ricardo Wurmus2020-12-171-29/+29
* gnu: r-cummerbund: Move from "experiment" to "package" section.•••* gnu/packages/bioconductor.scm (r-cummerbund): Move variable. Ricardo Wurmus2020-12-171-30/+30
* gnu: r-coverageview: Move from "experiment" to "package" section.•••* gnu/packages/bioconductor.scm (r-coverageview): Move variable. Ricardo Wurmus2020-12-171-27/+27
* gnu: Add r-org-eck12-eg-db.•••* gnu/packages/bioconductor.scm (r-org-eck12-eg-db): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu2020-12-171-0/+27
* gnu: Add r-pathview.•••* gnu/packages/bioconductor.scm (r-pathview): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu2020-12-171-0/+34
* gnu: Add r-kegggraph.•••* gnu/packages/bioconductor.scm (r-kegggraph): New variable. Mădălin Ionel Patrașcu2020-12-171-0/+26
* gnu: Add r-gagedata.•••* gnu/packages/bioconductor.scm (r-gagedata): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu2020-12-171-0/+26
* gnu: rust-lzma-sys-0.1: Update to 0.1.17.•••* gnu/packages/crates-io.scm (rust-lzma-sys-0.1): Update to 0.1.17. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-11/+11
* gnu: rust-encoding-rs-0.8: Don't skip build.•••* gnu/packages/crates-io.scm (rust-encoding-rs-0.8)[arguments]: Don't skip build. Efraim Flashner2020-12-171-2/+1
* gnu: rust-encoding-rs-0.8: Update to 0.8.26.•••* gnu/packages/crates-io.scm (rust-encoding-rs-0.8): Update to 0.8.26. [arguments]: In cargo-inputs remove rust-packed-simd-0.3, add rust-packed-simd-2-0.3, replace rust-cfg-if-0.1 with 1. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-4/+4
* gnu: Add rust-rkv-0.10.•••* gnu/packages/crates-io.scm (rust-rkv-0.10): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+41
* gnu: rust-sleef-sys-0.1: Adjust inputs.•••* gnu/packages/crates-io.scm (rust-sleef-sys-0.1)[arguments]: Move all crates from cargo-development-inputs to cargo-inputs. Replace rust-cbindgen-0.50 with 0.46. Efraim Flashner2020-12-171-3/+3
* gnu: Add rust-packed-simd-2-0.3.•••* gnu/packages/crates-io.scm (rust-packed-simd-2-0.3): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+45
* gnu: Add rust-rusqlite-0.23.•••* gnu/packages/crates-io.scm (rust-rusqlite-0.23): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+57
* gnu: rust-indexmap-1: Update to 1.6.1.•••* gnu/packages/crates-io.scm (rust-indexmap-1): Update to 1.6.1. [arguments]: Add rust-hashbrown-0.9 to cargo-inputs. In cargo-development-inputs add rust-fxhash-0.2, replace rust-itertools-0.8 with 0.9, reust-serde-test-1 with rust-serde-derive-1. Efraim Flashner2020-12-171-4/+6
* gnu: rust-serde-json-1: Update to 1.0.60.•••* gnu/packages/crates-io.scm (rust-serde-json-1): Update to 1.0.60. [arguments]: Add rust-automod-1, rust-serde-stacker-0.1 to cargo-inputs. Don't skip build. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-12/+11
* gnu: Add rust-serde-stacker-0.1.•••* gnu/packages/crates-io.scm (rust-serde-stacker-0.1): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+27
* gnu: Add rust-libsqlite3-sys-0.18.•••* gnu/packages/crates-io.scm (rust-libsqlite3-sys-0.18): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+36
* gnu: Add rust-lmdb-rkv-0.14.•••* gnu/packages/crates-io.scm (rust-lmdb-rkv-0.14): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+33
* gnu: Add rust-lmdb-rkv-sys-0.11.•••* gnu/packages/crates-io.scm (rust-lmdb-rkv-sys-0.11): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+35
* gnu: lmdb: Install pkg-config file.•••* gnu/packages/databases.scm (lmdb)[arguments]: Add phase to create a lmdb.pc file. Efraim Flashner2020-12-171-1/+19
* gnu: Add rust-nom-2.•••* gnu/packages/crates-io.scm (rust-nom-2): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+21
* gnu: Add rust-size-format-1.•••* gnu/packages/crates-io.scm (rust-size-format-1): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+23
* gnu: Add rust-tabwriter-1.•••* gnu/packages/crates-io.scm (rust-tabwriter-1): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Joseph LaFreniere2020-12-171-0/+27
* gnu: Add nvc.•••* gnu/packages/fpga.scm (nvc): New variable. Danny Milosavljevic2020-12-171-0/+45
* gnu: emacs-slime: Update to 2.26.1.•••* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.26.1. Nicolas Goaziou2020-12-171-2/+2
* gnu: emacs-project: Update to 0.5.3.•••* gnu/packages/emacs-xyz.scm (emacs-project): Update to 0.5.3. Nicolas Goaziou2020-12-171-2/+2
* gnu: emacs-xref: Update to 1.0.4.•••* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.0.4. Nicolas Goaziou2020-12-171-2/+2
* doc: Emacs Packages: Fix typos.•••* doc/contributing.texi (Emacs Packages): Fix typo. Also remove spurious white space, and unnecessary quote. Nicolas Goaziou2020-12-171-3/+3
* gnu: Add emacs-elegant-agenda-mode.•••* gnu/packages/emacs-xyz.scm (emacs-elegant-agenda-mode): New variable. Ricardo Wurmus2020-12-171-0/+25
* gnu: emacs-org-sidebar: Update to 0.3.2.•••* gnu/packages/emacs-xyz.scm (emacs-org-sidebar): Update to 0.3.2. Maxim Cournoyer2020-12-171-2/+2
* gnu: emacs-org-ql: Update to 0.5.•••* gnu/packages/emacs-xyz.scm (emacs-org-ql): Update to 0.5. [propagated-inputs]: Add emacs-transient. [native-inputs]: Add emacs-with-simulated-input. [phases]{require-helm}: Remove. {disable-failing-tests}: New phase. Maxim Cournoyer2020-12-171-12/+16
* gnu: Add emacs-with-simulated-input.•••* gnu/packages/emacs-xyz.scm (emacs-with-simulated-input): New variable. Maxim Cournoyer2020-12-171-0/+35
* gnu: emacs-org-super-agenda: Update to 1.2 and enable tests.•••* gnu/packages/emacs-xyz.scm (emacs-org-super-agenda): Update to 1.2. [arguments]: Enable tests. [phases]{prepare-for-tests}: New phase. [native-inputs]: Add emacs-f and util-linux. Maxim Cournoyer2020-12-171-26/+43
* doc: Add Emacs packaging guidelines.•••* doc/contributing.texi (Emacs Packages): New subsection. Maxim Cournoyer2020-12-172-0/+42
* gnu: linux-libre 5.4: Update to 5.4.84.•••* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.84. (deblob-scripts-5.4, linux-libre-5.4-pristine-source): Update hashes. Leo Famulari2020-12-161-4/+4
* gnu: linux-libre: Update to 5.9.15.•••* gnu/packages/linux.scm (linux-libre-5.9-version): Update to 5.9.15. (deblob-scripts-5.9, linux-libre-5.9-pristine-source): Update hashes Leo Famulari2020-12-161-3/+3
* gnu: bind: Update to 9.16.10.•••* gnu/packages/dns.scm (isc-bind): Update to 9.16.10. Tobias Geerinckx-Rice2020-12-161-2/+2
* gnu: Add python-myhdl.•••* gnu/packages/fpga.scm (python-myhdl): New variable. Danny Milosavljevic2020-12-161-0/+19
* gnu: icedove: Update to 78.6.0.•••* gnu/packages/gnuzilla.scm (icedove): Update to 78.6.0. Jonathan Brielmaier2020-12-161-4/+4
* gnu: Add emacs-project.•••* gnu/packages/emacs-xyz.scm (emacs-project): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Nicolas Goaziou2020-12-161-0/+20
* gnu: Add emacs-xref.•••* gnu/packages/emacs-xyz.scm (emacs-xref): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Nicolas Goaziou2020-12-161-0/+20
* gnu: emacs-org-caldav: Make description a full sentence.•••* gnu/packages/emacs-xyz.scm (emacs-org-caldav)[description]: Make it a full sentence. Nicolas Goaziou2020-12-161-1/+2
* gnu: emacs-org-caldav: Update to 0.0.0-2-8569941.•••* gnu/packages/emacs-xyz.scm (emacs-org-caldav): Update to 0.0.0-2-8569941. Nicolas Goaziou2020-12-161-4/+4
* gnu: python-internetarchive: Fix typo.•••* gnu/packages/web.scm (python-internetarchive): Fix typo. Jonathan Brielmaier2020-12-161-1/+1
* gnu: obs: Update to 26.1.0.•••* gnu/packages/video.scm (obs): Update to 26.1.0. Signed-off-by: Leo Famulari <leo@famulari.name> Michael Rohleder2020-12-161-2/+2
* gnu: webkitgtk: Update to 2.30.4.•••* gnu/packages/webkit.scm (webkitgtk): Update to 2.30.4. Mark H Weaver2020-12-151-2/+2
* gnu: Add libcaption.•••* gnu/packages/video.scm (libcaption): New variable. Leo Famulari2020-12-151-0/+38
* gnu: Add bootterm.•••* gnu/packages/terminals.scm (bootterm): New variable. Leo Famulari2020-12-151-0/+37
* gnu: emacs-telega: Update homepage.•••* gnu/packages/emacs-xyz.scm (emacs-doom-modeline)[home-page]: Use updated URL. Brett Gilio2020-12-151-1/+1