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* Merge branch 'master' into stagingMarius Bakke2018-08-2541-1296/+3213
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| * gnu: libx11: Replace with 1.6.6 [security fixes].•••This fixes CVE-2018-14599, CVE-2018-14600, and CVE-2018-14598. * gnu/packages/xorg.scm (libx11)[replacement]: New field. (libx11-1.6.6): New public variable. Marius Bakke2018-08-251-0/+15
| * gnu: dante: Disable preloading to make 'sockd' work.•••* gnu/packages/networking.scm (dante)[arguments]: Pass '--disable-preload' to #:configure-flags. 宋文武2018-08-251-0/+5
| * gnu: OpenSSH: Update to 7.8p1.•••* gnu/packages/ssh.scm (openssh): Update to 7.8p1. [source]: Remove 'openssh-CVE-2018-15473.patch'. * gnu/packages/patches/openssh-CVE-2018-15473.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Leo Famulari2018-08-243-169/+2
| * nls: Update 'de' translation.Leo Famulari2018-08-241-829/+2080
| * import: cpan: Adjust test to new URL.•••This is a followup to 9aba9b127840a116c806a2cbac901cf8077abcd0. * tests/cpan.scm ("cpan->guix-package"): Adjust 'home-page' URL. Ludovic Courtès2018-08-241-1/+1
| * grafts: Add (guix build debug-link) and use it.•••Fixes <https://bugs.gnu.org/19973>. Reported by Mark H Weaver <mhw@netris.org>. * guix/build/debug-link.scm: New file. * guix/build/graft.scm (%graft-hooks): New variable. (graft): Add #:hooks and honor it. * guix/grafts.scm (graft-derivation/shallow): Add (guix build debug-link) and (guix elf) to #:modules. * tests/debug-link.scm: New file. * Makefile.am (MODULES): Add guix/build/debug-link.scm. (SCM_TESTS): Add tests/debug-link.scm. Ludovic Courtès2018-08-245-3/+385
| * grafts: Add high-level 'graft' procedure on the build side.•••* guix/build/graft.scm (graft): New procedure. * guix/grafts.scm (graft-derivation/shallow)[build]: Use it instead of inline code. Ludovic Courtès2018-08-242-13/+21
| * gnu: font-gnu-unifont: Update to 11.0.02.•••* gnu/packages/fonts.scm (font-gnu-unifont): Update to 11.0.02. [arguments]: Adjust code to install 'unifont.info.gz' in 'install' phase. Ludovic Courtès2018-08-241-4/+5
| * gnu: gdb: Update to 8.1.1.•••* gnu/packages/gdb.scm (gdb): Update to 8.1.1. Ludovic Courtès2018-08-241-2/+2
| * gnu: Add find-circ.•••* gnu/packages/bioinformatics.scm (find-circ): New variable. Ricardo Wurmus2018-08-241-0/+52
| * gnu: r-catools: Update to 1.17.1.1.•••* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.1. Tobias Geerinckx-Rice2018-08-241-2/+2
| * gnu: keepassxc: Update to 2.3.4.•••* gnu/packages/password-utils.scm (keepassxc): Update to 2.3.4. [arguments]: Remove obsolete ‘patch-sources’ phase. Tobias Geerinckx-Rice2018-08-241-16/+6
| * gnu: capstone: Update to 3.0.5.•••* gnu/packages/engineering.scm (capstone): Update to 3.0.5. [arguments]: Set cstool's LDFLAGS in the environment instead of SUBSTITUTE*ing the Makefile. Tobias Geerinckx-Rice2018-08-241-9/+7
| * gnu: r-trimcluster: Update to 0.1-2.1.•••* gnu/packages/statistics.scm (r-trimcluster): Update to 0.1-2.1. Tobias Geerinckx-Rice2018-08-241-2/+2
| * gnu: r-synchronicity: Update to 1.3.5.•••* gnu/packages/statistics.scm (r-synchronicity): Update to 1.3.5. Tobias Geerinckx-Rice2018-08-241-2/+2
| * gnu: guile-lib: Update to 0.2.6.1.•••* gnu/packages/guile.scm (guile-lib): Update to 0.2.6.1. [source]: Remove obsolete snippet. Tobias Geerinckx-Rice2018-08-241-12/+3
| * gnu: tuxguitar: Update to 1.5.2.•••* gnu/packages/music.scm (tuxguitar): Update to 1.5.2. [source]: Remove obsolete snippet. Tobias Geerinckx-Rice2018-08-241-14/+7
| * gnu: libgig: Update to 4.1.0.•••* gnu/packages/music.scm (libgig): Update to 4.1.0. Tobias Geerinckx-Rice2018-08-241-2/+2
| * gnu: denemo: Use INVOKE.•••* gnu/packages/music.scm (denemo)[arguments]: Substitute INVOKE for SYSTEM*. Tobias Geerinckx-Rice2018-08-241-2/+2
| * gnu: ncmpc: Update to 0.29.•••* gnu/packages/mpd.scm (ncmpc): Update to 0.29. [build-system]: Switch to Meson. [arguments]: Find ncurses.h. [native-inputs]: Add gettext. Tobias Geerinckx-Rice2018-08-241-4/+8
| * gnu: parallel: Update to 20180822.•••* gnu/packages/parallel.scm (parallel): Update to 20180822. Ludovic Courtès2018-08-241-2/+2
| * gnu: boost: Move 1.59.0 definition to boost.scm.•••Fixes a regression introduced in commit 7cbf06d8c2935abfc6c688cf3f9b99e0e5393960 where the top-level code of these two modules would depend on each other, leading to "boost: unbound variable" kind of errors in some circumstances. * gnu/packages/databases.scm (boost-for-mysql): Move to... * gnu/packages/boost.scm (boost-for-mysql): ... here. Make public and add 'properties' field. Ludovic Courtès2018-08-242-14/+16
| * gnu: r-devtools: Update to 1.13.6.•••* gnu/packages/statistics.scm (r-devtools): Update to 1.13.6. Tobias Geerinckx-Rice2018-08-231-2/+2
| * gnu: drumkv1: Update to 0.9.2.•••* gnu/packages/music.scm (drumkv1): Update to 0.9.2. Tobias Geerinckx-Rice2018-08-231-3/+3
| * gnu: synthv1: Update to 0.9.2.•••* gnu/packages/music.scm (synthv1): Update to 0.9.2. Tobias Geerinckx-Rice2018-08-231-3/+3
| * gnu: samplv1: Update to 0.9.2.•••* gnu/packages/music.scm (samplv1): Update to 0.9.2. Tobias Geerinckx-Rice2018-08-231-3/+3
| * gnu: padthv1: Update to 0.9.2.•••* gnu/packages/music.scm (padthv1): Update to 0.9.2. Tobias Geerinckx-Rice2018-08-231-3/+3
| * gnu: Update home pages for the V1 synth family.•••* gnu/packages/music.scm (synthv1, drumkv1, samplv1, padthv1) [home-page]: Update & use HTTPS. Tobias Geerinckx-Rice2018-08-231-4/+4
| * gnu: Add r-a3.•••gnu/packages/cran.scm (r-a3): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> pimi2018-08-231-0/+23
| * gnu: Add r-manipulatewidget.•••gnu/packages/cran.scm (r-manipulatewidget): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> pimi2018-08-231-0/+31
| * gnu: Add r-slam.•••gnu/packages/cran.scm (r-slam): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> pimi2018-08-231-0/+18
| * gnu: Add r-abcanalysis.•••gnu/packages/cran.scm (r-abcanalysis): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> pimi2018-08-231-0/+25
| * gnu: Add r-miniui.•••gnu/packages/web.scm (r-miniui): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> pimi2018-08-231-0/+24
| * gnu: qjackctl: Update to 0.5.3.•••* gnu/packages/audio.scm (qjackctl): Update to 0.5.3. Tobias Geerinckx-Rice2018-08-231-3/+3
| * gnu: byobu: Update home page.•••* gnu/packages/screen.scm (byobu)[home-page]: Update & use HTTPS. Tobias Geerinckx-Rice2018-08-231-1/+1
| * gnu: byobu: Update to 5.127.•••* gnu/packages/screen.scm (byobu): Update to 5.127. * gnu/packages/patches/byobu-writable-status.patch: Adjust context accordingly. Tobias Geerinckx-Rice2018-08-232-10/+10
| * gnu: wine-staging-patchset-data: Don't use unstable archive.•••* gnu/packages/wine.scm (wine-staging-patchset-data)[source]: Use GIT-FETCH and GIT-FILE-NAME. [native-inputs]: Remove unzip. [arguments]: Adjust and refactor accordingly. Tobias Geerinckx-Rice2018-08-231-23/+25
| * gnu: yubico-piv-tool: Update to 1.6.1.•••* gnu/packages/security-token.scm (yubico-piv-tool): Update to 1.6.1. Tobias Geerinckx-Rice2018-08-231-2/+2
| * gnu: r-car: Update to 3.0-1.•••* gnu/packages/statistics.scm (r-car): Update to 3.0-1. Tobias Geerinckx-Rice2018-08-231-2/+2
| * gnu: r-digest: Update to 0.6.16.•••* gnu/packages/statistics.scm (r-digest): Update to 0.6.16. Tobias Geerinckx-Rice2018-08-231-2/+2
| * gnu: r-dplyr: Update to 0.7.6.•••* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.6. Tobias Geerinckx-Rice2018-08-231-2/+2
| * gnu: r-rcpp: Update to 0.12.18.•••* gnu/packages/cran.scm (r-rcpp): Update to 0.12.18. Tobias Geerinckx-Rice2018-08-231-2/+2
| * gnu: duplicity: Update to 0.7.18.•••* gnu/packages/backup.scm (duplicity): Update to 0.7.18. Tobias Geerinckx-Rice2018-08-231-10/+10
| * gnu: darcs: Update to 2.14.1.•••* gnu/packages/version-control.scm (darcs): Update to 2.14.1. [arguments]: Add patch-sh phase. Enable tests. Arun Isaac2018-08-231-9/+11
| * gnu: ghc-zlib: Update to 0.6.2.•••* gnu/packages/haskell.scm (ghc-zlib): Update to 0.6.2. Arun Isaac2018-08-231-2/+2
| * gnu: ghc-quickcheck-instances: Update to 0.3.18.•••* gnu/packages/haskell-check.scm (ghc-quickcheck-instances): Update to 0.3.18. [arguments]: Allow building with newer base-compat. Arun Isaac2018-08-231-2/+5
| * gnu: ghc-graphviz: Update to 2999.20.0.2.•••* gnu/packages/haskell.scm (ghc-graphviz): Update to 2999.20.0.2. [native-inputs]: Add ghc-hspec, graphviz and hspec-discover. Arun Isaac2018-08-231-2/+7
| * gnu: ghc-wl-pprint-text: Update to 1.2.0.0.•••* gnu/packages/haskell.scm (ghc-wl-pprint-text): Update to 1.2.0.0. [inputs]: Add ghc-base-compat. Arun Isaac2018-08-231-3/+4
| * gnu: ghc-base-compat: Update to 0.10.4.•••* gnu/packages/haskell.scm (ghc-base-compat): Update to 0.10.4. Arun Isaac2018-08-231-2/+2