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* gnu: Remove rust-speedate-0.13.Efraim Flashner9 days1-19/+0
| | | | | | * gnu/packages/crates-io.scm (rust-speedate-0.13): Delete variable. Change-Id: If87fdace181ac73764bbbda69610719a8928605b
* gnu: rust-jiter-0.5: Inherit from rust-jiter-0.7.Efraim Flashner9 days1-7/+2
| | | | | | | * gnu/packages/crates-io.scm (rust-jiter-0.5): Inherit from rust-jiter-0.7. Change-Id: Ib6b91c8173c0b8fd28a98f879af6c597e25c82ad
* gnu: rust-jiter-0.7: Switch to python-minimal-wrapper.Efraim Flashner9 days1-1/+1
| | | | | | | | * gnu/packages/crates-io.scm (rust-jiter-0.7)[inputs]: Remove python-wrapper. [native-inputs]: Add python-minimal-wrapper. Change-Id: Ic2cdff94efa56bb8cd38fce0407e309402312d66
* gnu: rust-speedate-0.14: Inherit from rust-speedate-0.15.Efraim Flashner9 days1-7/+2
| | | | | | | * gnu/packages/crates-io.scm (rust-speedate-0.14): Inherit from rust-speedate-0.15. Change-Id: Ie3e25802b774e0e788fbdb22b1a190addb070a75
* gnu: rust-jiter-0.2: Inherit from rust-jiter-0.5.Efraim Flashner9 days1-7/+2
| | | | | | | * gnu/packages/crates-io.scm (rust-jiter-0.2): Inherit from rust-jiter-0.5. Change-Id: I429742b2e1af82397cec801d6fec5a5357c03a7d
* gnu: Add missing imports for relocated scorep-openmpi.Maxim Cournoyer9 days1-0/+5
| | | | | | | | This is a follow-up to 1109bc6858. * gnu/packages/mpi.scm: Add missing imports. Change-Id: I9953662e6bc79bd04d60ad7fe88fd17dbde20bc4
* Reapply "gnu: Add vv."Maxim Cournoyer9 days1-0/+67
| | | | This reverts commit 3fa68819a2876c831d01d1cbd7895e9fd3157899.
* gnu: Relocate scorep-openmpi to (gnu packages mpi).Maxim Cournoyer9 days2-65/+65
| | | | | | | | | | | The make-scorep procedure makes use of its argument, a package, at the top level. Since it is not delayed, it is susceptible to cause top level module cycles, as it did with the introduction of commit fc27362f8d. * gnu/packages/profiling.scm (make-scorep, scorep-openmpi): Move to... * gnu/packages/mpi.scm: ... here. Change-Id: I7989fb7c3da654f36d8e5e86bc383f02bd577935
* Revert "gnu: Add vv."Maxim Cournoyer9 days1-67/+0
| | | | | This reverts commit fc27362f8d6e45149c4f8f725462f7d20c9efb2c. This broke 'guix pull'.
* gnu: Add vv.Danny Milosavljevic9 days1-0/+67
| | | | | | * gnu/packages/image-viewers.scm (vv): New variable. Change-Id: I0f0b4eb220993b5d10583793c9754aa089918248
* gnu: Add aklomp-base64.Danny Milosavljevic9 days1-0/+89
| | | | | | * gnu/packages/cpp.scm (aklomp-base64): New variable. Change-Id: I95d1e254abf190c526ac06c2a52ebc3b656dee45
* gnu: libjxl: Update to 0.10.4.Danny Milosavljevic9 days1-0/+45
| | | | | | * gnu/packages/image.scm (libjxl-0.10): New variable. Change-Id: Ie74cefe214e5587fc250b6595fb109ea7b7008c0
* gnu: openexr: Add imath dependency.Danny Milosavljevic9 days1-2/+2
| | | | | | | * gnu/packages/gnu/packages/graphics.scm (openexr)[propagated-inputs]: Add imath. Change-Id: I9e096f866d71f41402e86c782651eb10bbfa32f1
* gnu: stb: Update to 2e2bef463a5b53ddf8bb788e25da6b8506314c08.Danny Milosavljevic9 days1-12/+13
| | | | | | | | | | | | | | | * gnu/packages/stb.scm (stb): Update to 2e2bef463a5b53ddf8bb788e25da6b8506314c08. [arguments<#:phases>[check]: Disable. (stb-image): Update to 2.30. (stb-image-resize): Remove variable. (stb-image-resize2): New variable. (stb-image-write): Update to 1.16. (stb-rect-pack): Update to 1.01. (stb-printf): Update to 1.10. (stb-truetype): Update to 1.26. Change-Id: I664c1d557d99b6495f7b4797df991710003321cb
* gnu: Add r-deoptim.Navid Afkhami9 days1-0/+23
| | | | | | | * gnu/packages/cran.scm (r-deoptim): New variable. Change-Id: I0db4f2aa6707ffa99c2e57f616689dcd3a296236 Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: python-orange-widget-base: Update to 4.25.1.Sharlatan Hellseher9 days1-15/+31
| | | | | | | | | | | | | | * gnu/packages/orange.scm (python-orange-widget-base): Update to 4.25.1. Use G-Expressions, fix build. [srouce]: Adjust URI as PyPI archive name has been changed. [build-system]: Swap to pyproject-build-system. [arguments] <tests?>: Enable them. <test-flags>: Skipp 3 failing tests. <phases>: Remove 'check-setup, add 'pre-check. [native-inputs]: Add python-pytest, python-setuptools, python-trubar, and python-wheel. Change-Id: I20db769c92ec67263984c79ee77e430fd35712ae
* gnu: python-orange-canvas-core: Update to 0.2.5.Sharlatan Hellseher9 days1-15/+41
| | | | | | | | | | | | | | | | | * gnu/packages/orange.scm: Add (guix gexp), (guix build-system pyproject), and (gnu packages check). Sort modules alphabetically. (python-orange-canvas-core): Update to 0.2.5. Use G-Expressions and fix build. [build-system]: Swap to pyproject-build-system. [arguments] <test-flags>: Skip 3 tests. <phases>: Remove 'check-setup, add 'pre-check and 'relax-requirements. [propagated-inputs]: Add python-numpy, python-requests-cache, and python-typing-extensions. [native-inputs]: Add python-pytest, python-setuptools, python-trubar, and python-wheel. Change-Id: If504e1d6c01b4235d562991a5551c698dd6deb39
* gnu: Add python-requests-cache.Sharlatan Hellseher9 days1-0/+63
| | | | | | * gnu/packages/python-web.scm (python-requests-cache): New variable. Change-Id: I790b509e88529ce85c6f46240064ceb88aff35ce
* gnu: Add python-url-normalize.Sharlatan Hellseher9 days1-0/+51
| | | | | | * gnu/packages/python-web.scm (python-url-normalize): New variable. Change-Id: Ic86b7d27451ef994b980efc1fb7faa2a813f4e0a
* gnu: Add python-trubar.Sharlatan Hellseher9 days1-0/+39
| | | | | | * gnu/packages/python-xyz.scm (python-trubar): New variable. Change-Id: I684fc614862cbfd3ac8edaaf68e66ea2a8ec237b
* gnu: python-libcst: Update to 0.3.18.Sharlatan Hellseher9 days1-25/+29
| | | | | | | | | | | | | | | * gnu/packages/python-xyz.scm (python-libcst): Update to 0.3.18. Use G-Expressions, improve style and fix build. [build-system]: Swap to pyproject-build-system. [arguments] <test-flags>: Move skip test logic here instead of deleting test files. <phases>: Remove 'generate-test-data. Use default 'check. [native-inputs]: Remove python-black and python-isort; add python-pytest, python-setuptools, and python-wheel. (python-libcst-minimal) [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Ia3e85d17d02a8ea1dd7bc0b2a9062d46b11d6651
* gnu: python-libneuroml: Update to 0.6.5.Sharlatan Hellseher9 days1-4/+7
| | | | | | | | | * gnu/packages/python-science.scm (python-libneuroml): Update to 0.6.5. Fix build. [propagated-inputs]: Remove python-six; add python-natsort and python-networkx. Change-Id: I750f90cebdeba46286239b18569300a2e4ce8c80
* gnu: python-asprin: Add missing inputs.Sharlatan Hellseher9 days1-2/+7
| | | | | | | * gnu/packages/potassco.scm (python-asprin) [native-inputs]: Add python-setuptools and python-wheel. Change-Id: I1c61ff4c431202a2627b704a4d73d56922c61bb8
* gnu: python-eventlet: Move to python-web.Sharlatan Hellseher9 days2-54/+54
| | | | | | | * gnu/packages/python-xyz.scm (python-eventlet): Move from here ... * gnu/packages/python-web.scm: ... to here. Change-Id: I71beee927f17133267bf0236f075bccf15effe0e
* gnu: python-eventlet: Adjust inputs.Sharlatan Hellseher9 days1-10/+9
| | | | | | | * gnu/packages/python-xyz.scm (python-eventlet) [native-inputs]: Remove python-black, python-isort, and python-pre-commit. Change-Id: Id0671cf1ec87f2c44a5b1bd915efae594c17804e
* gnu: python-typing-inspect: Update to 0.9.0.Sharlatan Hellseher9 days3-44/+9
| | | | | | | | | | | | | * gnu/packages/python-xyz.scm (python-typing-inspect): Update to 0.9.0. [source]: Remove patch, as <https://github.com/ilevkivskyi/typing_inspect/issues/60> was resolved. [build-system]: Swap to pyproject-build-system. [native-inputs]: Add python-pytest, python-setuptools, and python-wheel. * gnu/packages/patches/python-typing-inspect-fix.patch: Delete file. * gnu/local.mk: Deregester the patch. Change-Id: Idc6e8745d4b85624863a5c2dc24e533a7dd92f46
* gnu: python-testpath: Update to 0.6.0.Sharlatan Hellseher9 days1-26/+5
| | | | | | | | | | * gnu/packages/check.scm (python-testpath): Update to 0.6.0. [build-system]: Swap to pyproject-build-system. [arguments] <phases>: Remove 'relax-requirements. Use default 'build, 'check and 'install. [native-inputs]: Remove python-pypa-build. Change-Id: I510407b86a938151c20272bb8396529823f3fb48
* gnu: python-miio: Migrate to pyproject-build-system.Sharlatan Hellseher9 days1-15/+3
| | | | | | | | | * gnu/packages/android.scm (python-miio) [build-system]: Swap to pyproject-build-system. [arguments] <phases>: Remove 'relax-requirements. Use default 'check. [native-inputs]: Remove python-sphinx; add python-poetry-core. Change-Id: I0749f313d23e55bac0174a9ccd38aa92ac6eb26d
* gnu: python-sphinxcontrib-apidoc: Update to 0.5.0.Sharlatan Hellseher9 days1-8/+8
| | | | | | | | | | | * gnu/packages/sphinx.scm (python-sphinxcontrib-apidoc): Update to 0.5.0. [build-system]: Swap to pyproejct-build-system. [arguments] <tests?>: Enable them. [propagated-inputs]: Add python-pbr and python-sphinx. [native-inputs]: Remove python-pbr, python-sphinx, and python-testrepository; add python-setuptools and python-wheel. Change-Id: I6daa8a2bf1deaf71c57bcc712e22ef85724ad0b5
* gnu: python-modin: Update to 0.32.0.Ricardo Wurmus9 days1-18/+21
| | | | | | | | | | | * gnu/packages/python-science.scm (python-modin): Update to 0.32.0. [build-system]: Use pyproject-build-system. [arguments]: Remove phase 'make-files-writable; disable one test; update custom 'check phase. [propagated-inputs]: Add python-s3fs. [native-inputs]: Add python-boto3 and python-wheel. Change-Id: I1d74013902e3387945586192b88c1e4fd8256733
* gnu: python-pynetdicom: Update to 2.1.1.Ricardo Wurmus9 days1-5/+15
| | | | | | | | | | | * gnu/packages/python-science.scm (python-pynetdicom): Update to 2.1.1. [native-inputs]: Add python-codespell, python-coverage, python-poetry-core, python-pytest-cov, python-pytest-xdist, python-sphinx, and python-sphinx-rtd-theme; remove python-pyfakefs, python-setuptools, and python-wheel. [propagated-inputs]: Add python-mypy, python-numpydoc, and python-pyfakefs. Change-Id: Ic0089df89cd34b50c31370581db7a6e88884199c
* gnu: python-asyncua: Update to 1.1.5.Ricardo Wurmus9 days1-6/+9
| | | | | | | | | * gnu/packages/engineering.scm (python-asyncua): Update to 1.1.5. [native-inputs]: Replace python-pytest-asyncio with python-pytest-asyncio-0.21. [propagated-inputs]: Add python-pyopenssl and python-typing-extensions. Change-Id: Ic28b84b420d46f4e38c5f1713a7d295355d224a0
* gnu: Add python-pytest-asyncio-0.21.Ricardo Wurmus9 days1-0/+17
| | | | | | * gnu/packages/check.scm (python-pytest-asyncio-0.21): New variable. Change-Id: I00a1c54acbe774965be013462906d4616252dc99
* gnu: python-wand: Disable two failing tests.Ricardo Wurmus9 days1-0/+3
| | | | | | * gnu/packages/python-xyz.scm (python-wand)[arguments]: Disable two tests. Change-Id: I6739af9c167ba6e827c7660caaa3fd64de574a8f
* gnu: r-trackviewer: Fix reference.Ricardo Wurmus9 days1-1/+1
| | | | | | | * gnu/packages/bioconductor.scm (r-trackviewer)[arguments]: Use correct label for reference to origin. Change-Id: I6c66ab468e19025ee9e912a531c8e6ca458e750b
* gnu: r-motifstack: Fix reference.Ricardo Wurmus9 days1-1/+1
| | | | | | | * gnu/packages/bioconductor.scm (r-motifstack)[arguments]: Use correct label for reference to origin. Change-Id: Ia9b3222f15c9630bd703713111e79937126e20fd
* gnu: r-reportingtools: Fix reference.Ricardo Wurmus9 days1-2/+2
| | | | | | | * gnu/packages/bioconductor.scm (r-reportingtools)[arguments]: Use correct label for reference to origin. Change-Id: Id3b509c369bd35e12fff2fb2f4822bef4152aff1
* gnu: r-radiant-data: Fix reference.Ricardo Wurmus9 days1-1/+1
| | | | | | | * gnu/packages/cran.scm (r-radiant-data)[arguments]: Use correct label for reference to origin. Change-Id: I5486e99fcca41f4d6968f4f95009159ffc66c05b
* gnu: python-django-haystack: Enable tests.Sharlatan Hellseher9 days1-10/+6
| | | | | | | | | * gnu/packages/django.scm (python-django-haystack): Use G-Expressions. [arguments] <phases>: Use custom 'check. Remove 'set-gdal-lib-path having it makes all tests to fail. [inputs]: Remove gdal. Change-Id: Ic7b70f731cd805b2aedfc94fe9a13cb37c7ff930
* gnu: python-geopy: Update to 2.4.1.Sharlatan Hellseher9 days1-11/+12
| | | | | | | | | | | | * gnu/packages/geo.scm (python-geopy): Update to 2.4.1. [build-system]: Swap to pyproject-build-system. [arguments] <test-flags>: Skip tests requiring Internet. [native-inputs]: Remove python-async-generator, python-coverage, python-flake8, python-isort, python-pytest-aiohttp, and python-readme-renderer; add python-docutils, python-pytest-asyncio, python-setuptools, and python-wheel. Change-Id: I051f6b9a98e6adb0e72dd3e57a73ee66c5df4b86
* gnu: python-geographiclib: Update to 2.0.Sharlatan Hellseher9 days1-4/+8
| | | | | | | | * gnu/packages/geo.scm (python-geographiclib): Update to 2.0. [build-system]: Swap to pyproject-build-system. [native-inputs]: Add python-pytest, python-setuptools, and python-wheel. Change-Id: I066cecab0a6934a5f18867b248b97d7a193c1d36
* gnu: python-pandas-vet: Update to 2023.8.2.Ricardo Wurmus9 days1-4/+22
| | | | | | | | * gnu/packages/python-check.scm (python-pandas-vet): Update to 2023.8.2. [arguments]: Add phase 'set-version. [native-inputs]: Add python-hatchling and python-pytest-cov. Change-Id: I2b6352ba70b8862a1103983a0574ab4d635942ab
* gnu: python-bigfloat: Fix build.Ricardo Wurmus9 days1-4/+16
| | | | | | | | | | | * gnu/packages/python-xyz.scm (python-bigfloat)[source]: Add snippet to delete generated file. [build-system]: Use pyproject-build-system. [arguments]: Disable one test; add phase 'cythonize. [native-inputs]: Add python-cython, python-pytest, python-setuptools, and python-wheel. Change-Id: If535051bbe7f223feb2a04b0b044a631c906f213
* gnu: python-ipfsspec: Add missing inputs.Ricardo Wurmus9 days1-1/+5
| | | | | | | * gnu/packages/python-xyz.scm (python-ipfsspec)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I763c22207f1b1bb5af5eb5667a060ab01757c864
* gnu: python-contexttimer: Add missing inputs.Ricardo Wurmus9 days1-1/+1
| | | | | | | * gnu/packages/python-xyz.scm (python-contexttimer)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I1d6e1efe869624c1da47332c8a000f88b458c193
* gnu: python-psycopg: Update to 3.2.4.Ricardo Wurmus9 days1-48/+37
| | | | | | | | | * gnu/packages/databases.scm (python-psycopg): Update to 3.2.4. [build-system]: Use pyproject-build-system. [arguments]: Simplify phases; restore 'sanity-check. [native-inputs]: Add python-setuptools and python-wheel. Change-Id: Iec2949c7e01e0dff2893181c3a49e8e3a3319446
* gnu: python-sphinx-5: Disable one failing test.Ricardo Wurmus9 days1-0/+3
| | | | | | * gnu/packages/sphinx.scm (python-sphinx-5)[arguments]: Disable one test. Change-Id: I97e5d4df511e11ac1335baaf99df839d5e58ed18
* gnu: python-apiron: Add missing inputs.Ricardo Wurmus9 days1-1/+2
| | | | | | | * gnu/packages/python-web.scm (python-apiron)[native-inputs]: Add python-setuptools and python-wheel. Change-Id: I98c35266870e2b2a9fa59f933350592cd0269721
* gnu: Move python-pysnptools to (gnu packages bioinformatics).Ricardo Wurmus9 days2-42/+42
| | | | | | | * gnu/packages/python-xyz.scm (python-pysnptools): Move from here... * gnu/packages/bioinformatics.scm (python-pysnptools): ...to here. Change-Id: I4dbd9cbe3f2d9a6dd4906be79b78862b39a57c28
* gnu: python-pysnptools: Update to 0.5.14.Ricardo Wurmus9 days1-16/+17
| | | | | | | | | | | | | * gnu/packages/python-xyz.scm (python-pysnptools): Update to 0.5.14. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. [propagated-inputs]: Remove python-dill; add python-bed-reader, python-cloudpickle, and python-more-itertools. [native-inputs]: Remove python-cython; add python-pytest, python-pytest-cov, python-pytest-datadir, python-pytest-doctestplus, python-setuptools, python-sphinx, python-sphinx-rtd-theme, and python-wheel. Change-Id: I685f819e70ab209198b504c6e41b253dc5a1d876
generated by cgit v1.2.3 (git 2.47.1) at 2025-01-30 07:42:53 +0000