summaryrefslogtreecommitdiff
Commit message (Expand)AuthorAgeFilesLines
* gnu: r-rsubread: Update to 1.34.7.•••* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.7. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-regioner: Update to 1.16.3.•••* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.3. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-gprofiler: Update to 0.6.8.•••* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.8. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-annotationhub: Update to 2.16.1.•••* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.1. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-edger: Update to 3.26.8.•••* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.8. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-ggraph: Update to 2.0.0.•••* gnu/packages/cran.scm (r-ggraph): Update to 2.0.0. [propagated-inputs]: Add r-graphlayouts, r-rlang, and r-tidygraph; remove r-plyr. Ricardo Wurmus2019-09-081-3/+5
* gnu: r-msigdbr: Update to 7.0.1.•••* gnu/packages/cran.scm (r-msigdbr): Update to 7.0.1. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-ggeffects: Update to 0.12.0.•••* gnu/packages/cran.scm (r-ggeffects): Update to 0.12.0. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-ggformula: Update to 0.9.2.•••* gnu/packages/cran.scm (r-ggformula): Update to 0.9.2. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-insight: Update to 0.5.0.•••* gnu/packages/cran.scm (r-insight): Update to 0.5.0. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-ggpubr: Update to 0.2.3.•••* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.3. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-geometry: Update to 0.4.4.•••* gnu/packages/cran.scm (r-geometry): Update to 0.4.4. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-feather: Update to 0.3.4.•••* gnu/packages/cran.scm (r-feather): Update to 0.3.4. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-matrixstats: Update to 0.55.0.•••* gnu/packages/statistics.scm (r-matrixstats): Update to 0.55.0. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-rcpparmadillo: Update to 0.9.700.2.0.•••* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.700.2.0. Ricardo Wurmus2019-09-081-2/+2
* gnu: r-devtools: Update to 2.2.0.•••* gnu/packages/statistics.scm (r-devtools): Update to 2.2.0. [propagated-inputs]: Add r-covr, r-crayon, r-desc, r-dt, r-ellipsis, r-glue, and r-rversions. Ricardo Wurmus2019-09-081-2/+9
* gnu: r-gdtools: Update to 0.2.0.•••* gnu/packages/statistics.scm (r-gdtools): Update to 0.2.0. [inputs]: Add freetype. [propagated-inputs]: Add r-systemfonts; remove r-withr. Ricardo Wurmus2019-09-081-3/+5
* gnu: Add r-tidygraph.•••* gnu/packages/cran.scm (r-tidygraph): New variable. Ricardo Wurmus2019-09-081-0/+33
* gnu: Add r-graphlayouts.•••* gnu/packages/cran.scm (r-graphlayouts): New variable. Ricardo Wurmus2019-09-081-0/+27
* gnu: Add r-systemfonts.•••* gnu/packages/cran.scm (r-systemfonts): New variable. Ricardo Wurmus2019-09-081-0/+29
* gnu: Add r-covr.•••* gnu/packages/cran.scm (r-covr): New variable. Ricardo Wurmus2019-09-081-0/+32
* tests: opam: Fix input type in import test.•••* tests/opam.scm: Expect propagated-inputs instead of inputs. Julien Lepiller2019-09-071-1/+1
* gnu: poussetaches: Update to 0.0.2.•••* gnu/packages/web.scm (poussetaches): Update to 0.0.2. Arun Isaac2019-09-081-2/+2
* gnu: nml: Fix for newer pillow version.•••* gnu/packages/game-development.scm (nml)[arguments]: Add a phase to fix for newer pillow. Julien Lepiller2019-09-071-0/+10
* doc: Use @lisp instead of @example for Scheme snippets.•••This is a followup to f8c143a7131d6f40f387f4cd2ad1fa78b5e2f429, which allows syntax highlighting of @lisp snippets in the HTML output. * doc/guix.texi, doc/contributing.texi: Use @lisp instead of @example for all the Scheme snippets. Ludovic Courtès2019-09-072-329/+329
* doc: Work around (htmlprag) parser issue.•••* doc/build.scm (guile-lib/htmlprag-fixed): New variable. (syntax-highlighted-html): Use it instead of GUILE-LIB. Ludovic Courtès2019-09-071-1/+31
* gnu: qtermwidget: Enable UTF-8 support.•••* gnu/packages/lxqt.scm (qtermwidget)[inputs]: Add utf8proc. Kei Kebreau2019-09-071-1/+2
* gnu: wireguard: Update to 0.0.20190905.•••* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190905. Rutger Helling2019-09-071-2/+2
* gnu: linux-libre: Update to 5.2.13.•••* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.13. (linux-libre-5.2-pristine-source): Update hash. Mark H Weaver2019-09-061-2/+2
* gnu: linux-libre@4.14: Update to 4.19.71.•••* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.71. (linux-libre-4.19-pristine-source): Update hash. Mark H Weaver2019-09-061-2/+2
* gnu: linux-libre@4.14: Update to 4.14.142.•••* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.142. (linux-libre-4.14-pristine-source): Update hash. Mark H Weaver2019-09-061-2/+2
* gnu: linux-libre@4.9: Update to 4.9.191.•••* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.191. (linux-libre-4.9-pristine-source): Update hash. Mark H Weaver2019-09-061-2/+2
* gnu: linux-libre@4.4: Update to 4.4.191.•••* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.191. (linux-libre-4.4-pristine-source): Update hash. Mark H Weaver2019-09-061-2/+2
* Revert "services: Add ‘/usr/bin/env’ special file."•••This reverts commit 3b38bf141a464e1bb370af7d2b2651d1efb29781. The Guix project discussed this years ago and decided against including /usr/bin/env. That decision should not be reversed without a wider discussion. Mark H Weaver2019-09-061-6/+3
* gnu: python-scipy: Update to 1.3.1.•••* gnu/packages/python-xyz.scm (python-scipy): Update to 1.3.1. (python2-scipy): Keep at version 1.2.2. Ricardo Wurmus2019-09-071-4/+14
* gnu: xfce4-panel: Fix tzdata path.•••* gnu/packages/xfce.scm (xfce4-panel)[inputs]: Add tzdata. [arguments] Add Fix-tzdata-path phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> L p R n d n2019-09-071-1/+12
* gnu: libxfce4ui: Add vendor.•••* gnu/packages/xfce.scm (libxfce4ui)[arguments]: Add #:configure-flags. Signed-off-by: Ludovic Courtès <ludo@gnu.org> L p R n d n2019-09-071-0/+3
* gnu: libxfce4ui: Add gobject-introspection support.•••* gnu/packages/xfce.scm (libxfce4ui): Add gobject-introspection to native-inputs. Signed-off-by: Ludovic Courtès <ludo@gnu.org> L p R n d n2019-09-071-1/+2
* gnu: xfconf: Fix tests.•••* gnu/packages/xfce.scm (xfconf)[arguments]: Rename check phase to custom-check. [native-inputs]: Add dbus. Signed-off-by: Ludovic Courtès <ludo@gnu.org> L p R n d n2019-09-071-2/+3
* gnu: xfconf: Add vala support.•••* gnu/packages/xfce.scm (xfconf): Add vala to native-inputs. Signed-off-by: Ludovic Courtès <ludo@gnu.org> L p R n d n2019-09-071-1/+2
* gnu: xfconf: Add support for gobject-introspection.•••* gnu/packages/xfce.scm (xfconf): Add gobject-introspection to native-inputs. Signed-off-by: Ludovic Courtès <ludo@gnu.org> L p R n d n2019-09-071-2/+2
* doc: Highlight Scheme syntax in the HTML output.•••* doc/build.scm (syntax-highlighted-html): New procedure. (html-manual): Use it. Ludovic Courtès2019-09-071-1/+114
* gnu: qtwebkit: Disable non-x86 builds.•••* gnu/packages/qt.scm (qtwebkit)[supported-systems]: New field. Ludovic Courtès2019-09-071-0/+6
* gnu: ecl-net.didierverna.asdf-flv: Fix variable name.•••Fixes a typo in 0403d01f01c22ddd552dd5a0cfb97b0e8e58da9e. * gnu/packages/lisp.scm (ecl-net.didierverna.asdf-flv): New name of the second occurrence of 'ecl-alexandria'. Ludovic Courtès2019-09-071-1/+1
* gnu: Add emacs-poet-theme.•••* gnu/packages/emacs-xyz.scm (emacs-poet-theme): New variable. Ricardo Wurmus2019-09-061-0/+26
* gnu: exim: Update to 4.92.2 [fixes CVE-2019-15846].•••* gnu/packages/mail.scm (exim): Update to 4.92.2. Tobias Geerinckx-Rice2019-09-061-2/+2
* gnu: crates-io.scm: Fix several home-pages.•••* gnu/packages/crates-io.scm (rust-constant-time-eq, rust-fixedbitset, rust-futures, rust-pico-sys, rust-pkg-config, rust-quick-error, rust-remove-dir-all, rust-spin, rust-tempdir, rust-traitobject, rust-void)[home-page]: Update to correct home-page. Efraim Flashner2019-09-061-12/+11
* gnu: Add samblaster.•••* gnu/packages/bioinformatics.scm (samblaster): New variable. Ricardo Wurmus2019-09-061-0/+34
* gnu: Add r-txdb-celegans-ucsc-ce6-ensgene.•••* gnu/packages/bioconductor.scm (r-txdb-celegans-ucsc-ce6-ensgene): New variable. Ricardo Wurmus2019-09-061-0/+25
* gnu: Add rust-parity-wasm.•••* gnu/packages/crates-io.scm (rust-parity-wasm): New variable. Efraim Flashner2019-09-061-0/+25