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* gnu: Add cl-trivial-utilities.•••* gnu/packages/lisp-xyz.scm (cl-trivial-utilities, ecl-trivial-utilities, sbcl-trivial-utilities): New variables. Change-Id: I1fde88484add5b77cf93ccacafb17ac548929481 Sharlatan Hellseher2024-03-211-0/+32
* gnu: Add cl-arrow-macros.•••* gnu/packages/lisp-xyz.scm (cl-arrow-macros, ecl-arrow-macros, sbcl-arrow-macros): New variables. Change-Id: I1d92139871f456d7d6780f2e60bbfed951d0298e Sharlatan Hellseher2024-03-211-0/+32
* gnu: cl-form-types: Update to 0.3.2.•••* gnu/packages/lisp-xyz.scm (sbcl-cl-form-types): Update to 0.3.2. Change-Id: I33a90bba9efb181466d113951a9eb398d20b2648 Sharlatan Hellseher2024-03-211-2/+2
* gnu: cl-form-types: Disable tests on ECL implementation.•••* gnu/packages/lisp-xyz.scm (ecl-cl-form-types): Disable tests. Change-Id: I8cca905edc57bf4e3e25847aff425ef1762f2e3f Sharlatan Hellseher2024-03-211-1/+9
* doc: Add “Source Tree Structure” section.•••* doc/contributing.texi (Source Tree Structure): New node. * doc/guix.texi (Programming Interface): Add cross-reference. Change-Id: I141a1f4d806ae5f72c7a246e18c14dc63056a607 Ludovic Courtès2024-03-212-2/+255
* services: guix-publish: Use ‘make-systemd-constructor’ unconditionally.•••The #:lazy-start? parameter was added in the Shepherd 0.10.0, which is required since commit 477d4f7d241165b5a5fd315c27efd7803fad4a04. * gnu/services/base.scm (guix-publish-shepherd-service): Use ‘make-systemd-constructor’ unconditionally and pass #:lazy-start?. Change-Id: I95aa079732cd21e32091c7deea2ed2f1bc50f2f2 Ludovic Courtès2024-03-211-10/+5
* reconfigure: Skip starting new shepherd services with auto-start? #f•••Fixes <https://bugs.gnu.org/68093>. * guix/scripts/system/reconfigure.scm (upgrade-shepherd-services): Only add new shepherd services with auto-start? #t to to-start list. Change-Id: I268b921336fb1195ed76746eb6178889dbc258b4 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Richard Sent2024-03-211-1/+2
* doc: Update ‘block-facebook-hosts-service-type’ description.•••This is a followup to c1d37d0653766c8de52e22bae01701baf503338f. * doc/guix.texi (Networking Services): Update to mention unroutable addresses. Change-Id: I6f62e1f414a3eb7892b2d4cc0d011458bbec7001 Ludovic Courtès2024-03-211-3/+3
* services: shepherd: Load each service file in a fresh module.•••Fixes <https://issues.guix.gnu.org/67649>. * gnu/home/services/shepherd.scm (home-shepherd-configuration-file)[config]: Define ‘make-user-module’. Call ‘load’ in ‘save-module-excursion’. * gnu/services/shepherd.scm (shepherd-configuration-file): Likewise. Reported-by: Attila Lendvai <attila@lendvai.name> Change-Id: I7df11c81b5bbbf2b24a8daa02502a000e0826fe0 Ludovic Courtès2024-03-212-2/+25
* gnu: mullvadbrowser: Update to 13.0.12.•••* gnu/packages/mullvad-browsers.scm (%mullvadbrowser-build-date): Update to 20240313183935. (%mullvadbrowser-version): Update to 13.0.12. (%mullvadbrowser-firefox-version): Update to 115.9.0esr-13.0-1-build2. (mullvadbrowser-translation-base): Update to 595dcd5efe752cddc1b6ba47082ad9f5f4917fee. (mullvadbrowser-translation-specific): Update to c5361cb496ae7e047fd9226139537f1fcfc7938d. Change-Id: I365d5517cc145c0b66b502b5ed1738bf978a29da Clément Lassieur2024-03-211-9/+9
* gnu: torbrowser: Update to 13.0.12.•••* gnu/packages/tor-browsers.scm (%torbrowser-build-date): Update to 20240318163712. (%torbrowser-version): Update to 13.0.12. (%torbrowser-firefox-version): Update to 115.9.0esr-13.0-1-build3. (torbrowser-translation-base): Update to a4d224e82808529e135259e04fb58fb39b90da2d. (torbrowser-translation-specific): Update to e7aabc54138211e23bc60af1abe492c8bc68ce4b. Change-Id: I878f26149b22f5703e2e9bb7ee0aa1f4c4ada589 Clément Lassieur2024-03-211-9/+9
* gnu: make-torbrowser: Make products independent from each other.•••* gnu/packages/tor-browsers.scm (translation-base-browser): Rename to torbrowser-translation-base. (mullvadbrowser-translation-base): New variable. (translation-tor-browser): Rename to torbrowser-translation-specific. (translation-mullvad-browser): Rename to mullvadbrowser-translation-specific. (make-torbrowser): Add ‘translation-base’ and ‘translation-specific’ parameters and use them. (torbrowser, mullvadbrowser-base): Use the above parameters. (mullvadbrowser): Handle renaming. This allows translation-base-browser (now torbrowser-translation-base) and translation-tor-browser (now torbrowser-translation-specific) to be updated without triggering an update for Mullvad Browser. Change-Id: I2a94636eb6b0531c3a03cdb73c560d68060721ef Clément Lassieur2024-03-211-8/+24
* gnu: Add r-pairadise.•••* gnu/packages/bioinformatics.scm (r-pairadise): New variable. Change-Id: I7314d43c75ed008942757feb878628d1ac855f31 Ricardo Wurmus2024-03-211-0/+15
* gnu: Add pairadise.•••* gnu/packages/bioinformatics.scm (pairadise): New variable. Change-Id: I4ad543dea3ddcafd5cbf07623f1faaabb954ba40 Ricardo Wurmus2024-03-211-0/+38
* gnu: universal-ctags: Update to 6.1.20240317.0.•••* gnu/packages/code.scm (universal-ctags): Update to 6.1.20240317.0. Change-Id: I035bc73702fbe9951820e176f09bde16bd9049c6 Efraim Flashner2024-03-211-2/+2
* gnu: global: Update to 6.6.12.•••* gnu/packages/code.scm (global): Update to 6.6.12. Change-Id: If073f74f55199bfbc9f29b95e9e3db3a6cf00548 Efraim Flashner2024-03-211-2/+2
* gnu: toot: Update to 0.42.0.•••* gnu/packages/mastodon.scm (toot): Update to 0.42.0. [build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-pyyaml, python-typing-extensions. [inputs]: Add python-click, python-urwidgets. Change-Id: I085531e63e6f811319715cfddfad9f17c877897d Efraim Flashner2024-03-211-6/+13
* gnu: Add python-urwidgets.•••* gnu/packages/python-xyz.scm (python-urwidgets): New variable. Change-Id: I34a1cff78d9e930b13c01d53ab34f7ee57478a39 Efraim Flashner2024-03-211-0/+18
* gnu: libportal: Update to 0.7.1.•••* gnu/packages/freedesktop.scm (libportal): Update to 0.7.1. Change-Id: Iab3cf48ce63e2149b5680dbc852d0ed4483de6cc Efraim Flashner2024-03-211-2/+2
* gnu: xdg-desktop-portal-wlr: Update to 0.7.1.•••* gnu/packages/freedesktop.scm (xdg-desktop-portal-wlr): Update to 0.7.1. Change-Id: Id716cffe6db65fd3827dd52871b0620187466c5d Efraim Flashner2024-03-211-2/+2
* gnu: khard: Update to 0.19.1.•••* gnu/packages/mail.scm (khard): Update to 0.19.1. Change-Id: Ic091cc761920776f03a0d69189dc0b117db3786f Efraim Flashner2024-03-211-2/+2
* gnu: khal: Update to 0.11.3.•••* gnu/packages/calendar.scm (khal): Update to 0.11.3. Change-Id: I848166bfe9469ee37b8acd126fdc3a307914a63b Efraim Flashner2024-03-211-2/+2
* gnu: wgetpaste: Update to 2.34.•••* gnu/packages/wget.scm (wgetpaste): Update to 2.34. [arguments]: Remove custom 'change-unfriendly-default phase. Change-Id: I5677881702ffce7846552552bb7bceec81177843 Efraim Flashner2024-03-211-9/+3
* gnu: emacs-extempore-mode: Update to 0.0.0-1.92e0fff.•••* gnu/packages/emacs-xyz.scm (emacs-extempore-mode): Update to to 0.0.0-1.92e0fff. Change-Id: I1e4cfebedf5450384e40425619925ecdf7465a64 Signed-off-by: Christopher Baines <mail@cbaines.net> Giacomo Leidi2024-03-201-3/+3
* gnu: emacs-evil-collection: Update to 0.0.10.•••* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 0.0.10. Signed-off-by: Christopher Baines <mail@cbaines.net> Change-Id: I864c9a6434e9ba46cfb510183962aa6b3739b32a apoorv5692024-03-201-2/+2
* gnu: python-joblib: Update to 1.3.2.•••* gnu/packages/python-xyz.scm (python-joblib): Update to 1.3.2. [build-system]: Update to pyproject-build-system. [arguments] <#:phases>: Remove check phase. <#:test-flags>: Keep former test flag. [propagated-inputs]: Add python-psutil. Change-Id: Ide110a19431b1d26e1d7dd8d1adc3b3f0f417749 Signed-off-by: Christopher Baines <mail@cbaines.net> Nicolas Graves2024-03-201-14/+8
* gnu: xfce4-dev-tools: Add libxslt as a native-input.•••As the configure script is looking for it. * gnu/packages/xfce.scm (xfce4-dev-tools)[native-inputs]: Add libxslt. Change-Id: Ia7ab573bbdf7461fc68053667a5962717afd0015 Christopher Baines2024-03-201-1/+2
* gnu: electron-cash: Update to 4.4.0.•••* gnu/packages/finance.scm (electron-cash): Update to 4.4.0. Change-Id: Ibe9ee61d4d2817b68fb36fb3072c6d16b8bc1016 Guillaume Le Vaillant2024-03-201-2/+2
* gnu: nyxt: Update to 3.11.5.•••* gnu/packages/web-browsers.scm (nyxt): Update to 3.11.5. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Andre A. Gomes2024-03-201-2/+2
* gnu: sbcl-slime-swank: Update to 2.29.1.•••* gnu/packages/lisp-xyz.scm (sbcl-slime-swank): Update to 2.29.1. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Andre A. Gomes2024-03-201-40/+39
* gnu: emacs-slime: Update to 2.29.1.•••* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.29.1. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Andre A. Gomes2024-03-201-59/+57
* gnu: txr: Update to 294.•••* gnu/packages/lisp.scm (txr): Update to 294. Change-Id: I53693122aaf5b2c0ae8f7f13e846de81f1525fc1 Guillaume Le Vaillant2024-03-201-2/+2
* gnu: Add alsa-midi-latency-test.•••* gnu/packages/audio.scm (alsa-midi-latency-test): New variable. Change-Id: I35d3047cb997c5787de515a38ae0a0eb8f12600d Signed-off-by: Ludovic Courtès <ludo@gnu.org> Giacomo Leidi2024-03-191-1/+36
* gnu: combinatorial-blas: Skip failing tests.•••* gnu/packages/maths.scm (combinatorial-blas): Add new phase. Change-Id: Ifefb2b17e6758547d38290753a7cd338032a6abb Signed-off-by: Ludovic Courtès <ludo@gnu.org> Romain GARBAGE2024-03-191-0/+6
* gnu: Add python-pypugjs.•••* gnu/packages/python-xyz.scm (python-pypugjs): New variable. Change-Id: I050ab42d0149fcffddcf6b12dd9c1ddea23f84c9 Signed-off-by: Tanguy Le Carrour <tanguy@bioneland.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org> Tanguy Le Carrour2024-03-191-0/+48
* gnu: hikari: Build against wlroots@0.15.•••It fails to build with versions of wlroots newer than 0.15, which seems unlikey to be fixed https://hub.darcs.net/raichoo/hikari/issue/45 * gnu/packages/wm.scm (wlroots-0.15): New variable. (hikari)[inputs]: Replace wlroots with wlroots-0.15. Change-Id: Id90e1e1ff399afe54fff68167f497f0484d2c218 Signed-off-by: Ludovic Courtès <ludo@gnu.org> stuebinm2024-03-191-1/+16
* doc: cookbook: Account for ‘guix pull’ in /etc/profile instructions.•••* doc/guix-cookbook.texi (Setting Up Compute Nodes): Include $HOME/.config/guix/current. Change-Id: I6c1c42394991af8f1fa7c2630bdb4b0aef946c2b Ludovic Courtès2024-03-191-7/+10
* git authenticate: Document ‘--end’.•••* guix/scripts/git/authenticate.scm (show-help): Document ‘--end’. * doc/guix.texi (Invoking guix git authenticate): Likewise. Reported-by: Tomas Volf <~@wolfsden.cz> Change-Id: Ia646203ce2f721487de547c76b9488754c70db66 Ludovic Courtès2024-03-192-0/+5
* describe: Try harder to find the ‘guix pull’ profile.•••Fixes <https://issues.guix.gnu.org/66705>. The strategy used by ‘current-profile’ so far would fail to find the right profile (the one created by ‘guix pull’ or ‘guix time-machine’) in cases where said profile is itself included in another profile. This happens, for instance, when running ‘guix shell -CW -- guix describe’, which, as a result, would display nothing but the ‘guix’ channel. This patch fixes that by having ‘current-profile’ not just check for the presence of a ‘manifest’ file but also parse it to determine whether it’s a ‘guix pull’ kind of manifest. * guix/describe.scm (find-profile): New procedure. (current-profile): Adjust to use it. Change-Id: I9194f54ce1496a6591e247c76203f497f28c330b Ludovic Courtès2024-03-191-9/+39
* profiles: ‘read-manifest’ raises to ‘&profile-error’ upon version mis...•••* guix/profiles.scm (sexp->manifest): In the catch-all clause, raise to ‘&profile-error’ in addition to ‘&message’. Change-Id: Ieb08187b388531c2157bfe67fb1b7319dbbb4ff3 Ludovic Courtès2024-03-191-1/+3
* gnu: icecat: Update to 115.9.0-guix0-preview1 [security fixes].•••Includes fixes for CVE-2023-5388, CVE-2024-0743, CVE-2024-2605, CVE-2024-2607, CVE-2024-2608, CVE-2024-2610, CVE-2024-2611, CVE-2024-2612, CVE-2024-2614, and CVE-2024-2616. * gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes. Mark H Weaver2024-03-191-6/+6
* gnu: snakemake-7: Patch tibanna command line.•••* gnu/packages/python-xyz.scm (snakemake-7)[arguments]: Remove store reference in tibanna command line. Change-Id: I339f4c3133a0e687723a53277818749a8e5fc97a Ricardo Wurmus2024-03-191-1/+16
* gnu: r-hmisc: Update to 5.1-2.•••* gnu/packages/statistics.scm (r-hmisc): Update to 5.1-2. Change-Id: I6b6ab9916f58323f0bc523e3c8ff0a22e59d63b5 Ricardo Wurmus2024-03-191-2/+2
* gnu: r-tidyselect: Update to 1.2.1.•••* gnu/packages/statistics.scm (r-tidyselect): Update to 1.2.1. Change-Id: Id5cddcbd6180070c16651634eff8cd9c4839c104 Ricardo Wurmus2024-03-191-2/+2
* gnu: r-digest: Update to 0.6.35.•••* gnu/packages/statistics.scm (r-digest): Update to 0.6.35. Change-Id: I054d6daa5b056241547411e83a30a7d1e7afd2d1 Ricardo Wurmus2024-03-191-2/+2
* gnu: r-ragg: Update to 1.3.0.•••* gnu/packages/cran.scm (r-ragg): Update to 1.3.0. Change-Id: I3e44fe7dab732944082223cbde4f6cbd2800714f Ricardo Wurmus2024-03-191-2/+2
* gnu: r-mlr3learners: Update to 0.6.0.•••* gnu/packages/cran.scm (r-mlr3learners): Update to 0.6.0. Change-Id: Iac86172bfc5d3d3b719ccacb4b87c120ce2cc596 Ricardo Wurmus2024-03-191-2/+2
* gnu: r-seurat: Update to 5.0.3.•••* gnu/packages/cran.scm (r-seurat): Update to 5.0.3. Change-Id: Id86830ab2ce8122989bf88149fb9d733b8a458fa Ricardo Wurmus2024-03-191-2/+2
* gnu: r-erm: Update to 1.0-6.•••* gnu/packages/cran.scm (r-erm): Update to 1.0-6. Change-Id: I2bfd514d63ee0ae873d4368f7fb2ba9798998cd5 Ricardo Wurmus2024-03-191-2/+2
* gnu: r-gamlss-data: Update to 6.0-6.•••* gnu/packages/cran.scm (r-gamlss-data): Update to 6.0-6. Change-Id: I6bb7a4ae35b7c83d132979a6024d4cedabe97eb3 Ricardo Wurmus2024-03-191-2/+2