| Commit message (Expand) | Author | Age | Files | Lines |
|---|
| ... | |
| * | guix: emacs-utils: Add emacs-batch-disable-compilation.•••* guix/build/emacs-utils.scm (emacs-batch-disable-compilation):
New procedure.
Signed-off-by: Brett Gilio <brettg@gnu.org>
| Leo Prikler | 2019-12-27 | 1 | -0/+8 |
| * | gnu: r-inspect: Update to 1.16.1.•••* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.1.
[propagated-inputs]: Add r-gdata.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+3 |
| * | gnu: r-multiassayexperiment: Update to 1.12.1.•••* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-rgadem: Update to 2.34.1.•••* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.34.1.
[propagated-inputs]: Add r-genomicranges.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+3 |
| * | gnu: r-clusterprofiler: Update to 3.14.2.•••* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.2.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-enrichplot: Update to 1.6.1.•••* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.6.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-biocsingular: Update to 1.2.1.•••* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-affycoretools: Update to 1.58.3.•••* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.3.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-car: Update to 3.0-6.•••* gnu/packages/statistics.scm (r-car): Update to 3.0-6.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-robust: Update to 0.4-18.2.•••* gnu/packages/statistics.scm (r-robust): Update to 0.4-18.2.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-bigmemory: Update to 4.5.36.•••* gnu/packages/statistics.scm (r-bigmemory): Update to 4.5.36.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-foreign: Update to 0.8-74.•••* gnu/packages/statistics.scm (r-foreign): Update to 0.8-74.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-slam: Update to 0.1-47.•••* gnu/packages/cran.scm (r-slam): Update to 0.1-47.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-bibtex: Update to 0.4.2.1.•••* gnu/packages/cran.scm (r-bibtex): Update to 0.4.2.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-topgo: Update to 2.38.1.•••* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.38.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-summarizedexperiment: Update to 1.16.1.•••* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.16.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-delayedarray: Update to 0.12.1.•••* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.12.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-biocparallel: Update to 1.20.1.•••* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.20.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: r-shortread: Update to 1.44.1.•••* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.44.1.
| Ricardo Wurmus | 2019-12-27 | 1 | -2/+2 |
| * | gnu: guix-data-service: Update to 0.0.1-12.f56935a.•••* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-12.f56935a.
| Christopher Baines | 2019-12-27 | 1 | -3/+3 |
| * | doc: Mention "make authenticate".•••* doc/contributing.texi (Building from Git): Add instructions to run
'git verify-commit' and 'make authenticate'.
| Ludovic Courtès | 2019-12-27 | 1 | -0/+42 |
| * | git-authenticate: Keep a local cache of previously-authenticated commits.•••A list of already-authenticated commits is kept in
~/.cache/guix/authentication. This speeds up subsequent "make
authenticate" invocations.
* build-aux/git-authenticate.scm (authenticated-commit-cache-file)
(previously-authenticated-commits, cache-authenticated-commit): New
procedures.
(git-authenticate): Define 'authenticated-commits' and pass it as a
third argument to 'commit-difference'. Add call to
'cache-authenticated-commit'. Don't display signing stats when STATS is
null.
| Ludovic Courtès | 2019-12-27 | 1 | -10/+70 |
| * | git: 'commit-difference' takes a list of excluded commits.•••* guix/git.scm (commit-closure): Add 'visited' optional parameter.
(commit-difference): Add 'excluded' optional parameter; pass second
argument to 'commit-closure'.
* tests/git.scm ("commit-difference, excluded commits"): New test.
| Ludovic Courtès | 2019-12-27 | 2 | -6/+34 |
| * | Add 'build-aux/git-authenticate.scm'.•••* build-aux/git-authenticate.scm: New file.
* Makefile.am (EXTRA_DIST): Add it.
(commit_v1_0_1): New variable.
(authenticate): New target.
| Ludovic Courtès | 2019-12-27 | 2 | -1/+364 |
| * | gnu: emacs-org-contrib: Update to 20191226.•••* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20191226.
| Nicolas Goaziou | 2019-12-27 | 1 | -2/+2 |
| * | gnu: emacs-org: Update to 9.3.1.•••* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.3.1.
| Nicolas Goaziou | 2019-12-27 | 1 | -4/+4 |
| * | gnu: emacs-telega: Update to 0.5.4.•••* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.5.4.
[arguments]: Working around imagemagick and svg is no longer needed.
[native-inputs]: Replace emacs-minimal with emacs. This is needed because
bytecompilation requires fringe-bitmap support.
| Brett Gilio | 2019-12-26 | 1 | -16/+4 |
| * | gnu: Add ffmpegthumbs.•••* gnu/packages/kde-multimedia.scm (ffmpegthumbs): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+31 |
| * | gnu: Add audiocd-kio.•••* gnu/packages/kde-multimedia.scm (audiocd-kio): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+41 |
| * | gnu: Add libkcompactdisc.•••* gnu/packages/kde-multimedia.scm (libkcompactdisc): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+27 |
| * | gnu: Add kamoso.•••* gnu/packages/kde-multimedia.scm (kamoso): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+48 |
| * | gnu: Add elisa.•••* gnu/packages/kde-multimedia.scm (elisa): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+69 |
| * | gnu: Add kwave.•••* gnu/packages/kde-multimedia.scm (kwave): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+80 |
| * | gnu: Add kmplayer.•••`guix lint` reports two CVEs, both are unrelated:
- CVE-2018-5200: for vendor "pandora" and some 4.2.2.x version
- CVE-2019-9133: windows only (I assume it it alsow relates to the "pandora"
vendor, since the version the CVE refers to as "solving the issue" does not
exist at KDE.)
* gnu/packages/kde-multimedia.scm (kmplayer): New variable.
* gnu/packages/patches/kmplayer-aarch64.patch,
gnu/packages/patches/kmplayer-upstream_Fix-build-with-Qt-5.9.patch: New
files.
* gnu/local.mk: Add them.
| Hartmut Goebel | 2019-12-26 | 4 | -0/+167 |
| * | gnu: Add kmix.•••* gnu/packages/kde-multimedia.scm (kmix): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+47 |
| * | gnu: Add kaffeine.•••* gnu/packages/kde-multimedia.scm (kaffeine): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -1/+58 |
| * | gnu: Add libkcddb.•••* gnu/packages/kde-multimedia.scm (libkcddb): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+31 |
| * | gnu: Add k3b.•••* gnu/packages/kde-multimedia.scm (k3b): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -1/+68 |
| * | gnu: Add juk.•••* gnu/packages/kde-multimedia.scm (juk): New variable.
| Hartmut Goebel | 2019-12-26 | 1 | -0/+56 |
| * | gnu: Add dragon.•••* gnu/packages/kde-multimedia.scm: New file.
* gnu/lokal.mk (MODULES): Add it.
| Hartmut Goebel | 2019-12-26 | 2 | -0/+74 |
| * | gnu: Add audiofile.•••Patches should fix all CVEs reported by `guix lint`:
CVE-2015-7747; CVE-2017-6827, CVE-2017-6828, CVE-2017-6829,
CVE-2017-6830, CVE-2017-6831, CVE-2017-6832, CVE-2017-6833,
CVE-2017-6834, CVE-2017-6835, CVE-2017-6836, CVE-2017-6837,
CVE-2017-6838, CVE-2017-6839; CVE-2018-13440; CVE-2018-17095
Since the patches do not reference to CVEs, it's a bit hard to tell which
patch actually closes which CVE. Debian reports all these to be closed by
the patches below and NixPkgs provides references.
* gnu/packages/audio.scm (audiofile): New variable.
* gnu/packages/patches/audiofile-fix-datatypes-in-tests.patch,
gnu/packages/patches/audiofile-fix-sign-conversion.patch,
gnu/packages/patches/audiofile-CVE-2015-7747.patch,
gnu/packages/patches/audiofile-CVE-2018-13440.patch,
gnu/packages/patches/audiofile-CVE-2018-17095.patch,
gnu/packages/patches/audiofile-Check-the-number-of-coefficients.patch,
gnu/packages/patches/audiofile-Fail-on-error-in-parseFormat.patch,
gnu/packages/patches/audiofile-Fix-index-overflow-in-IMA.cpp.patch,
gnu/packages/patches/audiofile-Fix-multiply-overflow-sfconvert.patch,
gnu/packages/patches/audiofile-Fix-overflow-in-MSADPCM-decodeSam.patch,
gnu/packages/patches/audiofile-division-by-zero-BlockCodec-runPull.patch,
gnu/packages/patches/audiofile-hurd.patch,
gnu/packages/patches/audiofile-signature-of-multiplyCheckOverflow.patch:
New files.
* gnu/local.mk: Add them.
| Hartmut Goebel | 2019-12-26 | 15 | -0/+1070 |
| * | gnu: python-fonttools: Update home-page.•••https://github.com/behdad/fonttools permanently redirects to
https://github.com/fonttools/fonttools.
* gnu/packages/python-xyz.scm (python-fonttools)[home-page]: Change to current.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
| Riku Viitanen | 2019-12-26 | 1 | -1/+1 |
| * | gnu: i3-gaps: Update source checksum.•••Fixes <https://bugs.gnu.org/38739>. This is a follow-up to commit
88c9408070280db51d1a0e604b9ec77f1611ab3c.
* gnu/packages/wm.scm (i3-gaps)[source](sha256): Change to the correct hash.
[build-system]: Remove field, because it is superfluous.
| Marius Bakke | 2019-12-26 | 1 | -2/+1 |
| * | download: Enable TLS 1.3.•••This reverts commit e4ee84202633636b4c8cef4a332f0c74912a3b23.
* guix/build/download.scm (tls-wrap): Dot not disable TLS 1.3.
| Marius Bakke | 2019-12-26 | 1 | -13/+2 |
| * | gnu: gdal: Use HTTPS home page URI.•••* gnu/packages/geo.scm (gdal)[home-page]: Use HTTPS URI.
| Arun Isaac | 2019-12-26 | 1 | -1/+1 |
| * | gnu: gdal: Enable netCDF format driver.•••* gnu/packages/geo.scm (gdal)[inputs]: Add netcdf.
| Arun Isaac | 2019-12-26 | 1 | -0/+2 |
| * | gnu: gdal: Enable GPKG format driver.•••* gnu/packages/geo.scm (gdal)[inputs]: Enable sqlite.
[arguments]: Add --with-sqlite3 to #:configure-flags.
| Arun Isaac | 2019-12-26 | 1 | -0/+2 |
| * | gnu: gdal: Enable ODS format driver.•••* gnu/packages/geo.scm (gdal)[inputs]: Add expat.
[arguments]: Add --with-expat to #:configure-flags.
| Arun Isaac | 2019-12-26 | 1 | -1/+3 |
| * | gnu: libspatialindex: Update to 1.9.3.•••* gnu/packages/geo.scm (libspatialindex): Update to 1.9.3.
[build-system]: Switch to cmake-build-system.
[source]: Update URI.
| Arun Isaac | 2019-12-26 | 1 | -5/+6 |
| * | gnu: postgis: Update to 3.0.0.•••* gnu/packages/geo.scm (postgis): Update to 3.0.0.
[inputs]: Add json-c and libjpeg-turbo. Replace proj.4 with proj.
| Arun Isaac | 2019-12-26 | 1 | -3/+5 |
