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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-11-26 22:06:03 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-12-03 16:59:52 +0100 |
| commit | 387ca84d52b4fb8ceefb0d8c46696017725a12c5 (patch) | |
| tree | cdfa2c3919897abdadb5120dd592c8acaa890a2b /gnu/packages/bioinformatics.scm | |
| parent | bf20a8fb151e0d28ad0aba8537f67026e310944b (diff) | |
gnu: r-bamutils: Add test inputs and disable tests.
* gnu/packages/bioinformatics.scm (r-bamutils)[arguments]: Disable tests.
[native-inputs]: Add r-testthat and samtools.
Change-Id: I781c38fb59355a51f2cd27a833d7ed5dbe5277ab
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 3 |
1 files changed, 3 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 17bee1cf50..3453501314 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12052,6 +12052,8 @@ sankey, alluvial and sankey bump plots in @code{ggplot2}.") "1r3y8775y2j9w92pdp42iaif7nbh260xljrhaswkz6lp71phf1yw")))) (properties `((upstream-name . "bamUtils"))) (build-system r-build-system) + ;; See https://github.com/mskilab-org/bamUtils/issues/12 + (arguments (list #:tests? #false)) (propagated-inputs (list r-abind r-biocgenerics @@ -12061,6 +12063,7 @@ sankey, alluvial and sankey bump plots in @code{ggplot2}.") r-gutils r-rsamtools r-variantannotation)) + (native-inputs (list r-testthat samtools)) (home-page "https://github.com/mskilab/bamutils/") (synopsis "Utility functions for manipulating BAMs") (description "This package provides utility functions for manipulating |