diff options
| author | zimoun <zimon.toutoune@gmail.com> | 2021-03-15 14:01:26 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-03-15 14:04:26 +0100 |
| commit | d5576b6eb7808574dd519bf7591b4cf08ea6cb2c (patch) | |
| tree | b28f612b45c8bfaab2128d6685063f4b50118470 /gnu/packages/bioconductor.scm | |
| parent | 5ac55aea8b78439cc72b70718cb7922599182712 (diff) | |
gnu: r-grohmm: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-grohmm): Move from here...
* gnu/packages/bioconductor.scm (r-grohmm): ...to here.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ca9bcc07eb..91d02639a3 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8567,6 +8567,33 @@ and manages a local cache of files retrieved enabling quick and reproducible access.") (license license:artistic2.0))) +(define-public r-grohmm + (package + (name "r-grohmm") + (version "1.24.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "groHMM" version)) + (sha256 + (base32 + "08pap9wsaxl4jjlc1py0rc019gmi6daa0f9cr3ih1d97wybncanx")))) + (properties `((upstream-name . "groHMM"))) + (build-system r-build-system) + (propagated-inputs + `(("r-genomeinfodb" ,r-genomeinfodb) + ("r-genomicalignments" ,r-genomicalignments) + ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) + ("r-mass" ,r-mass) + ("r-rtracklayer" ,r-rtracklayer) + ("r-s4vectors" ,r-s4vectors))) + (home-page "https://github.com/Kraus-Lab/groHMM") + (synopsis "GRO-seq analysis pipeline") + (description + "This package provides a pipeline for the analysis of GRO-seq data.") + (license license:gpl3+))) + (define-public r-multiassayexperiment (package (name "r-multiassayexperiment") |