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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-11-28 21:54:11 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-12-03 16:59:57 +0100 |
| commit | 8417b0f27a46069b84a2bbc4410ac8c0d3c2d52b (patch) | |
| tree | 3a4042e4d7fab968e2891de35a46bd35f29ca003 /gnu/packages/bioconductor.scm | |
| parent | f1d03188a6fcfdb7c977b31a393f9eb7f19043df (diff) | |
gnu: Add r-mafdb-1kgenomes-phase1-hs37d5.
* gnu/packages/bioconductor.scm (r-mafdb-1kgenomes-phase1-hs37d5): New variable.
Change-Id: Id8827d4a5d788ef2bc4d258048572e697e61b4d2
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index c03e5a59c3..ccb011e62b 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -374,6 +374,34 @@ using the crlmm package.") utilize the TFBSTools package (version 1.23.1 or higher).") (license license:gpl2))) +(define-public r-mafdb-1kgenomes-phase1-hs37d5 + (package + (name "r-mafdb-1kgenomes-phase1-hs37d5") + (version "3.10.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "MafDb.1Kgenomes.phase1.hs37d5" version + 'annotation)) + (sha256 + (base32 "0vsjik59qa36w402bcrd5z27wc9vyp4gl0ffcwskd9iwjqim0phi")))) + (properties `((upstream-name . "MafDb.1Kgenomes.phase1.hs37d5"))) + (build-system r-build-system) + (propagated-inputs (list r-bsgenome + r-genomeinfodb + r-genomicranges + r-genomicscores + r-iranges + r-s4vectors)) + (home-page + "https://bioconductor.org/packages/MafDb.1Kgenomes.phase1.hs37d5") + (synopsis + "Minor allele frequency data from 1000 Genomes Phase 1 for hs37d5") + (description + "Store minor allele frequency data from the Phase 1 of the 1000 Genomes +Project for the human genome version hs37d5.") + (license license:artistic2.0))) + (define-public r-mafh5-gnomad-v3-1-2-grch38 (package (name "r-mafh5-gnomad-v3-1-2-grch38") |